Factsheet for Bra030915.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54010.1	Bra024839.1-P	AT2G01950.1	19000166
AT1G54010.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54591	Canola	extracellular	97.15	96.9
CDY54192	Canola	extracellular	33.16	95.52
Bra014372.1-P	Field mustard	extracellular	88.34	88.8
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	84.97	85.19
AT1G54010.1	Thale cress	extracellular	83.94	83.94
AT1G54000.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	83.42	82.35
Bra030912.1-P	Field mustard	extracellular	79.79	69.21
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	68.13	68.67
Bra027358.1-P	Field mustard	extracellular	68.65	68.3
Bra027359.1-P	Field mustard	extracellular	66.32	68.09
Bra037957.1-P	Field mustard	extracellular	65.54	66.06
Bra030913.1-P	Field mustard	cytosol	44.3	61.07
Bra021542.1-P	Field mustard	vacuole	41.71	44.85
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	38.6	37.82
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	38.08	37.79
Bra030911.1-P	Field mustard	extracellular, vacuole	38.34	37.47
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	30.31	31.97
KRG97291	Soybean	extracellular	8.55	31.43
KRH13794	Soybean	nucleus	28.5	29.81
Bra027357.1-P	Field mustard	extracellular	28.76	29.76
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	28.24	29.7
KRH47690	Soybean	extracellular, vacuole	27.98	29.51
VIT_09s0002g00550.t01	Wine grape	extracellular	27.72	29.4
VIT_09s0002g00570.t01	Wine grape	extracellular	28.24	29.38
KRH13793	Soybean	nucleus	27.98	29.27
KRH69020	Soybean	extracellular	26.42	29.14
Solyc11g051060.1.1	Tomato	vacuole	26.94	28.89
KRH07083	Soybean	extracellular	20.21	28.36
Bra030917.1-P	Field mustard	extracellular, vacuole	27.2	28.3
Solyc11g051100.1.1	Tomato	cytosol, extracellular	5.18	28.17
Bra030916.1-P	Field mustard	plastid	26.42	28.1
KRG94370	Soybean	extracellular	26.42	27.95
Solyc06g065010.2.1	Tomato	nucleus	25.91	27.62
Bra014375.1-P	Field mustard	extracellular, vacuole	26.42	27.42
PGSC0003DMT400017106	Potato	extracellular	26.17	27.3
Bra027356.1-P	Field mustard	extracellular	26.42	27.27
PGSC0003DMT400074599	Potato	cytosol	23.32	27.19
Bra039701.1-P	Field mustard	extracellular, plasma membrane	22.54	27.1
Solyc06g064960.2.1	Tomato	extracellular	25.39	26.78
PGSC0003DMT400013272	Potato	extracellular, vacuole	25.39	26.7
Solyc04g028470.1.1	Tomato	cytosol	22.02	26.56
PGSC0003DMT400016123	Potato	cytosol	5.96	26.44
Solyc06g064980.2.1	Tomato	extracellular	26.17	26.37
Bra007962.1-P	Field mustard	extracellular, vacuole	24.09	26.27
KRG97292	Soybean	extracellular	24.61	25.96
PGSC0003DMT400080416	Potato	golgi, vacuole	24.09	25.69
Solyc06g064990.2.1	Tomato	extracellular	24.87	24.81
KRH06260	Soybean	cytosol, peroxisome	17.36	24.63
Bra030918.1-P	Field mustard	plastid	18.91	23.47
Solyc11g051120.1.1	Tomato	cytosol	8.55	22.76
Solyc01g109020.1.1	Tomato	extracellular	11.14	22.63
Solyc06g064970.2.1	Tomato	extracellular, vacuole	20.98	22.63
Solyc11g021040.1.1	Tomato	extracellular	11.66	21.53

Protein Annotations

EnsemblPlants:Bra030915.1	EnsemblPlants:Bra030915.1-P	EnsemblPlantsGene:Bra030915	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF485	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
TMHMM:TMhelix	UniParc:UPI0002545622	UniProt:M4EQ44	MapMan:35.1	:	:

Description

AT1G54010 (E=3e-178) | myrosinase-associated protein, putative

Coordinates

chrA08:+:755985..759370

Molecular Weight (calculated)

42546.6 Da

IEP (calculated)

7.786

GRAVY (calculated)

-0.159

Length

386 amino acids

Sequence
(BLAST)

001: MAGKCNLASV LGGFLVLTLL HNLLNVSGQN IPAVALFTFG DSNFDAGNKQ TLTKANVAQG FWPYGKSRDD PNGKFSDGFI TPDFVAKFMG IPIPIPAALK
101: PNVNVSRGAS FAVADATLLG APVESLTLNQ QVRKFNQMKA ENWNDDFIKK SVFMIYIGAN DYLNFTKNNP NADASAQQAF VTSVTNKLKN DISLLYSSGA
201: SKFVIQTLAP LGCLPIVRQD YNTGMDQCHE LLNNLAKQHN EKIGPMLNEL ARTPGFQFTV FDFYSVILRR TQRPSNYRFF VTNASCCGVG THNAYGCGLP
301: NVHSKLCEYQ RSYLFFDGRH NTEKAQESFG HLLFGADPNV IQPMNVRELI VYPVDEPMSE VWLPTTSAMV QASDSSSSAS RGYEFY

Best Arabidopsis Sequence Match ( AT1G54010.1 )
(BLAST)

001: MMAKNCNLVS VLCVFLVLTL FNKPITVAGQ NIPAVGLFTF GDSNFDAGNK QTLTKTLLPQ TFWPYGKSRD DPNGKFSDGL IAPDFLAKFM RIPIVIPPAL
101: QPNVNVSRGA SFAVADATLL GAPVESLTLN QQVRKFNQMK AANWNDDFVK KSVFMIYIGA NDYLNFTKNN PNADASTQQA FVTSVTNKLK NDISLLYSSG
201: ASKFVIQTLA PLGCLPIVRQ EFNTGMDQCY EKLNDLAKQH NEKIGPMLNE LARTAPASAP FQFTVFDFYN AILTRTQRNQ NFRFFVTNAS CCGVGTHDAY
301: GCGFPNVHSR LCEYQRSYLF FDGRHNTEKA QEMFGHLLFG ADTNVIQPMN IRELVVYPAD EPMRESWVPP TSATVQLRES RGYEYY

Arabidopsis Description

GLL23Inactive GDSL esterase/lipase-like protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4H8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.