Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 7
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 88.6 | 87.47 |
| Bra030915.1-P | Field mustard | extracellular | 83.94 | 83.94 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 83.16 | 83.38 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 83.16 | 83.38 |
| Bra014374.1-P | Field mustard | endoplasmic reticulum, vacuole | 83.16 | 83.38 |
| Bra014372.1-P | Field mustard | extracellular | 82.64 | 83.07 |
| CDY54591 | Canola | extracellular | 83.16 | 82.95 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 82.38 | 82.81 |
| CDY30676 | Canola | cytosol | 52.59 | 79.92 |
| CDY54192 | Canola | extracellular | 26.68 | 76.87 |
| CDY54588 | Canola | extracellular | 75.91 | 75.91 |
| CDY54196 | Canola | extracellular | 76.42 | 75.84 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 69.43 | 72.04 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 69.17 | 68.11 |
| Bra030912.1-P | Field mustard | extracellular | 74.09 | 64.27 |
| AT3G14220.1 | Thale cress | vacuole | 41.45 | 44.08 |
| AT1G53970.2 | Thale cress | cytosol | 8.81 | 35.05 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 37.56 | 34.77 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 30.57 | 32.24 |
| KRG97291 | Soybean | extracellular | 8.55 | 31.43 |
| KRH13794 | Soybean | nucleus | 27.72 | 29.0 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 27.2 | 28.85 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 27.72 | 28.84 |
| KRH13793 | Soybean | nucleus | 27.2 | 28.46 |
| KRH07083 | Soybean | extracellular | 20.21 | 28.36 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 26.94 | 28.34 |
| KRH69020 | Soybean | extracellular | 25.65 | 28.29 |
| Solyc11g051060.1.1 | Tomato | vacuole | 26.17 | 28.06 |
| KRH47690 | Soybean | extracellular, vacuole | 26.42 | 27.87 |
| AT3G14225.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 27.2 | 27.85 |
| AT1G53940.2 | Thale cress | plasma membrane | 26.68 | 27.39 |
| AT1G53990.1 | Thale cress | extracellular, plasma membrane | 25.91 | 27.25 |
| KRG94370 | Soybean | extracellular | 25.65 | 27.12 |
| AT1G53920.1 | Thale cress | cytosol | 26.94 | 27.01 |
| AT5G40990.1 | Thale cress | plasma membrane | 26.17 | 27.01 |
| PGSC0003DMT400074599 | Potato | cytosol | 23.06 | 26.89 |
| Solyc06g065010.2.1 | Tomato | nucleus | 24.87 | 26.52 |
| Solyc04g028470.1.1 | Tomato | cytosol | 21.76 | 26.25 |
| Solyc06g064960.2.1 | Tomato | extracellular | 24.87 | 26.23 |
| PGSC0003DMT400017106 | Potato | extracellular | 24.87 | 25.95 |
| KRG97292 | Soybean | extracellular | 24.35 | 25.68 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 4.66 | 25.35 |
| Solyc06g064980.2.1 | Tomato | extracellular | 25.13 | 25.33 |
| PGSC0003DMT400016123 | Potato | cytosol | 5.7 | 25.29 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 23.83 | 25.07 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 23.32 | 24.86 |
| AT1G71120.1 | Thale cress | endoplasmic reticulum | 23.32 | 24.86 |
| Solyc06g064990.2.1 | Tomato | extracellular | 24.35 | 24.29 |
| KRH06260 | Soybean | cytosol, peroxisome | 17.1 | 24.26 |
| Solyc01g109020.1.1 | Tomato | extracellular | 11.66 | 23.68 |
| Solyc11g051120.1.1 | Tomato | cytosol | 8.55 | 22.76 |
| Solyc11g021040.1.1 | Tomato | extracellular | 12.18 | 22.49 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 19.95 | 21.51 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:841839 | ProteinID:AAD25773.1 | ProteinID:AEE33034.1 | ArrayExpress:AT1G54010 |
| EnsemblPlantsGene:AT1G54010 | RefSeq:AT1G54010 | TAIR:AT1G54010 | RefSeq:AT1G54010-TAIR-G | EnsemblPlants:AT1G54010.1 | TAIR:AT1G54010.1 |
| EMBL:AY062552 | EMBL:AY084258 | EMBL:AY093330 | Unigene:At.19864 | InterPro:GDSL | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0005783 | GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016788 |
| InterPro:IPR036514 | RefSeq:NP_564647.1 | PFAM:PF00657 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0007131 |
| PO:PO:0009025 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF485 | UniProt:Q8W4H8 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| SUPFAM:SSF52266 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000009CA36 | SEG:seg | : |
Description
GLL23Inactive GDSL esterase/lipase-like protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4H8]
Coordinates
chr1:-:20158589..20160864
Molecular Weight (calculated)
43145.6 Da
IEP (calculated)
8.187
GRAVY (calculated)
-0.175
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAKNCNLVS VLCVFLVLTL FNKPITVAGQ NIPAVGLFTF GDSNFDAGNK QTLTKTLLPQ TFWPYGKSRD DPNGKFSDGL IAPDFLAKFM RIPIVIPPAL
101: QPNVNVSRGA SFAVADATLL GAPVESLTLN QQVRKFNQMK AANWNDDFVK KSVFMIYIGA NDYLNFTKNN PNADASTQQA FVTSVTNKLK NDISLLYSSG
201: ASKFVIQTLA PLGCLPIVRQ EFNTGMDQCY EKLNDLAKQH NEKIGPMLNE LARTAPASAP FQFTVFDFYN AILTRTQRNQ NFRFFVTNAS CCGVGTHDAY
301: GCGFPNVHSR LCEYQRSYLF FDGRHNTEKA QEMFGHLLFG ADTNVIQPMN IRELVVYPAD EPMRESWVPP TSATVQLRES RGYEYY
101: QPNVNVSRGA SFAVADATLL GAPVESLTLN QQVRKFNQMK AANWNDDFVK KSVFMIYIGA NDYLNFTKNN PNADASTQQA FVTSVTNKLK NDISLLYSSG
201: ASKFVIQTLA PLGCLPIVRQ EFNTGMDQCY EKLNDLAKQH NEKIGPMLNE LARTAPASAP FQFTVFDFYN AILTRTQRNQ NFRFFVTNAS CCGVGTHDAY
301: GCGFPNVHSR LCEYQRSYLF FDGRHNTEKA QEMFGHLLFG ADTNVIQPMN IRELVVYPAD EPMRESWVPP TSATVQLRES RGYEYY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.