Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71922 | Canola | extracellular, plasma membrane | 65.98 | 28.83 |
| Solyc01g109020.1.1 | Tomato | extracellular | 50.52 | 25.79 |
| Solyc11g021040.1.1 | Tomato | extracellular | 48.45 | 22.49 |
| AT1G53940.2 | Thale cress | plasma membrane | 81.44 | 21.01 |
| AT5G40990.1 | Thale cress | plasma membrane | 76.29 | 19.79 |
| AT1G53990.1 | Thale cress | extracellular, plasma membrane | 61.86 | 16.35 |
| AT3G14225.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 58.76 | 15.12 |
| Solyc06g064960.2.1 | Tomato | extracellular | 48.45 | 12.84 |
| AT1G53920.1 | Thale cress | cytosol | 49.48 | 12.47 |
| Solyc06g064990.2.1 | Tomato | extracellular | 49.48 | 12.4 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 46.39 | 12.26 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 45.36 | 12.15 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 44.33 | 12.01 |
| Solyc06g064980.2.1 | Tomato | extracellular | 47.42 | 12.01 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 44.33 | 11.72 |
| Solyc11g051060.1.1 | Tomato | vacuole | 43.3 | 11.67 |
| PGSC0003DMT400017106 | Potato | extracellular | 44.33 | 11.62 |
| Solyc06g065010.2.1 | Tomato | nucleus | 43.3 | 11.6 |
| Solyc04g028470.1.1 | Tomato | cytosol | 31.96 | 9.69 |
| PGSC0003DMT400074599 | Potato | cytosol | 32.99 | 9.67 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 34.02 | 8.87 |
| AT1G54010.1 | Thale cress | extracellular | 35.05 | 8.81 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 35.05 | 8.7 |
| AT1G71120.1 | Thale cress | endoplasmic reticulum | 31.96 | 8.56 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 31.96 | 7.91 |
| AT3G14220.1 | Thale cress | vacuole | 28.87 | 7.71 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 27.84 | 6.47 |
| Solyc11g051120.1.1 | Tomato | cytosol | 3.09 | 2.07 |
| PGSC0003DMT400016123 | Potato | cytosol | 0.0 | 0.0 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | EntrezGene:841835 | ProteinID:AAD25770.1 | ProteinID:AEE33030.2 | ProteinID:ANM57967.1 | ArrayExpress:AT1G53970 |
| EnsemblPlantsGene:AT1G53970 | RefSeq:AT1G53970 | TAIR:AT1G53970 | RefSeq:AT1G53970-TAIR-G | EnsemblPlants:AT1G53970.2 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016298 | GO:GO:0016787 |
| InterPro:Lipase_GDSL_AS | RefSeq:NP_001319220.1 | RefSeq:NP_175799.2 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF461 |
| UniProt:Q9SYF3 | UniParc:UPI000009F5CD | SEG:seg | : | : | : |
Description
F15I1.5 [Source:UniProtKB/TrEMBL;Acc:Q9SYF3]
Coordinates
chr1:+:20148419..20149749
Molecular Weight (calculated)
10977.7 Da
IEP (calculated)
4.795
GRAVY (calculated)
-0.553
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MEDNNNNNNN NNNLVTDQSA LFVFGDSVFD GGNNNYIDTL PSFRSNYWPY GQTTFKFSTG RVSDGRSILD FIAKYAWLPL IPPVLQPSNG NNHILMR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.