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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400013272
PGSC0003DMT400016123
PGSC0003DMT400016126
PGSC0003DMT400017106
PGSC0003DMT400074599
PGSC0003DMT400075691
PGSC0003DMT400080416

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 PGSC0003DMT400075691 AT2G01950.1 19000166
AT1G54030.1 PGSC0003DMT400013272 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400016123 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400016126 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400017106 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400074599 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400080416 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400013272 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400016123 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400016126 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400017106 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400074599 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400080416 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400013272 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400016123 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400016126 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400017106 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400074599 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400080416 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400013272 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400016123 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400016126 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400017106 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400074599 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400080416 AT3G14210.1 23155454
AT3G14220.1 PGSC0003DMT400075691 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g051120.1.1 Tomato cytosol 32.43 82.76
PGSC0003DMT400016123 Potato cytosol 14.86 63.22
PGSC0003DMT400016126 Potato plasma membrane, vacuole 57.84 58.31
KRG97291 Soybean extracellular 16.22 57.14
PGSC0003DMT400080416 Potato golgi, vacuole 54.05 55.25
PGSC0003DMT400013272 Potato extracellular, vacuole 54.05 54.5
VIT_09s0002g00530.t01 Wine grape cytosol 44.86 48.26
KRH69020 Soybean extracellular 44.59 47.14
VIT_09s0002g00510.t01 Wine grape extracellular 46.22 46.34
KRG97292 Soybean extracellular 45.68 46.17
CDY02490 Canola extracellular, vacuole 45.68 45.55
Bra030917.1-P Field mustard extracellular, vacuole 45.68 45.55
KRG94370 Soybean extracellular 44.86 45.48
VIT_09s0002g00540.t01 Wine grape extracellular 48.38 45.43
PGSC0003DMT400074252 Potato extracellular 45.14 45.26
KRH47690 Soybean extracellular, vacuole 44.59 45.08
AT1G53970.2 Thale cress cytosol 11.62 44.33
Bra039701.1-P Field mustard extracellular, plasma membrane 38.38 44.24
KRH06260 Soybean cytosol, peroxisome 32.43 44.12
KRH07083 Soybean extracellular 32.7 44.0
VIT_09s0002g00500.t01 Wine grape cytosol 34.32 43.64
VIT_09s0002g00520.t01 Wine grape extracellular 37.57 43.57
VIT_09s0002g00570.t01 Wine grape extracellular 43.24 43.13
KRH13794 Soybean nucleus 42.97 43.09
KRH13793 Soybean nucleus 42.43 42.55
AT5G40990.1 Thale cress plasma membrane 42.97 42.51
VIT_09s0002g00550.t01 Wine grape extracellular 41.62 42.31
CDY24064 Canola plasma membrane 42.97 42.29
Bra030916.1-P Field mustard plastid 41.35 42.15
AT1G53940.2 Thale cress plasma membrane 42.7 42.02
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 41.35 41.8
CDX98433 Canola extracellular, vacuole 42.16 41.71
CDY36617 Canola plasma membrane 38.92 41.62
Bra027356.1-P Field mustard extracellular 41.89 41.44
CDX97558 Canola extracellular 41.89 41.44
PGSC0003DMT400074599 Potato cytosol 36.76 41.09
CDY36619 Canola endoplasmic reticulum, plasma membrane 40.81 40.7
AT1G53990.1 Thale cress extracellular, plasma membrane 40.0 40.33
CDY30674 Canola extracellular, vacuole 40.54 40.32
AT3G14225.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 40.54 39.79
Bra014375.1-P Field mustard extracellular, vacuole 39.73 39.52
CDY69407 Canola extracellular 26.76 39.44
CDX98432 Canola extracellular 38.92 38.61
Bra027357.1-P Field mustard extracellular 38.65 38.34
CDX97557 Canola extracellular 38.65 38.34
CDY69208 Canola mitochondrion 31.62 37.5
CDY71922 Canola extracellular, plasma membrane 20.27 33.78
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 30.0 28.17
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 27.03 27.7
Bra030911.1-P Field mustard extracellular, vacuole 28.92 27.09
CDY54197 Canola extracellular, vacuole 28.92 27.09
CDY61480 Canola extracellular, vacuole 28.65 26.9
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 27.84 26.48
Bra037957.1-P Field mustard extracellular 27.3 26.37
Bra030915.1-P Field mustard extracellular 27.3 26.17
CDY36628 Canola cytosol 27.03 26.11
CDY54591 Canola extracellular 27.3 26.1
CDY30680 Canola mitochondrion 28.38 25.99
CDY33240 Canola vacuole 25.14 25.91
AT3G14220.1 Thale cress vacuole 25.41 25.9
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 26.76 25.85
CDY51412 Canola cytosol 26.49 25.59
CDY54192 Canola extracellular 9.19 25.37
CDY39106 Canola vacuole 24.59 25.35
Bra021542.1-P Field mustard vacuole 24.59 25.35
CDY51410 Canola mitochondrion, plastid 9.46 25.0
CDY08214 Canola cytosol 18.65 25.0
CDY08211 Canola endoplasmic reticulum, vacuole 25.95 24.94
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 25.95 24.94
CDY30675 Canola endoplasmic reticulum, vacuole 25.95 24.94
AT1G54010.1 Thale cress extracellular 25.95 24.87
Bra014372.1-P Field mustard extracellular 25.68 24.74
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 25.68 24.74
AT1G54020.2 Thale cress endoplasmic reticulum 24.86 24.73
CDY54196 Canola extracellular 25.95 24.68
CDY54588 Canola extracellular 25.68 24.61
CDY36623 Canola endoplasmic reticulum 25.41 24.54
CDX97555 Canola extracellular 25.41 24.35
Bra027359.1-P Field mustard extracellular 24.59 24.2
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 25.41 24.04
CDY30676 Canola cytosol 16.49 24.02
CDX75755 Canola plastid 27.57 23.78
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 26.76 23.74
CDX97556 Canola extracellular 24.86 23.71
Bra027358.1-P Field mustard extracellular 24.86 23.71
AT3G14210.1 Thale cress extracellular, golgi 24.86 23.47
CDX98428 Canola extracellular, plasma membrane, vacuole 24.32 23.2
CDY54194 Canola cytosol 17.3 22.86
Bra030913.1-P Field mustard cytosol 17.3 22.86
Bra030912.1-P Field mustard extracellular 25.95 21.57
PGSC0003DMT400096676 Potato mitochondrion 24.59 21.56
CDY36625 Canola extracellular 7.57 20.59
CDY54198 Canola cytosol 6.49 18.05
Protein Annotations
EnsemblPlants:PGSC0003DMT400017106EnsemblPlantsGene:PGSC0003DMG400006677Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF262PFAM:PF00657PGSC:PGSC0003DMG400006677SignalP:SignalP-noTMSUPFAM:SSF52266TMHMM:TMhelix
UniParc:UPI000295C7BAUniProt:M1A8K8MapMan:35.1:::
Description
GDSL esterase/lipase 5 [Source:PGSC_GENE;Acc:PGSC0003DMG400006677]
Coordinates
chr11:-:15399586..15401394
Molecular Weight (calculated)
41136.0 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.051
Length
370 amino acids
Sequence
(BLAST)
001: MAFSANLFHV CCLIFFAFFF TNPIKCVDGE GPLPALFVFG DSILDVGNNN YINTTTQFQA NWSPYGETFF KSPTGRPCDG RLISDFIAEF ANLSLIPAFF
101: EIGTDKFLHG VNFASSGSGC LVETNRGIVI DLQTQLTHFN EVVELLVNKL GSQQSQQLLT DAVYMFSTGS NDYAFPYLTN PKKFPFPKEQ FSEMVLGNFT
201: AILQAIYNKG GRKFIIFTLP PEGCSPGGRA FNAQIGGKSG ECMQELSGLL EMHSNALPKR LTQLQQNFKG FNFTLFDLYK LFTQRIDNPS KYGFNVSIEA
301: CCGTGAFKGI NSCGGKRQVK DYELCKNVTD YVFFDASHPT ETANQQFAQL LWNGTTDVIA PHNLKSFFQL
Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)
001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP
Arabidopsis Description
GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.