Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 6
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54197 | Canola | extracellular, vacuole | 97.46 | 97.22 |
| CDY08214 | Canola | cytosol | 60.66 | 86.59 |
| CDY36625 | Canola | extracellular | 29.7 | 86.03 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 78.43 | 85.6 |
| CDY30680 | Canola | mitochondrion | 86.55 | 84.41 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 79.7 | 75.3 |
| CDY54192 | Canola | extracellular | 14.21 | 41.79 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 37.31 | 38.18 |
| CDY39106 | Canola | vacuole | 34.77 | 38.16 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 37.06 | 37.92 |
| CDY33240 | Canola | vacuole | 34.52 | 37.88 |
| CDY54591 | Canola | extracellular | 36.8 | 37.47 |
| PGSC0003DMT400016123 | Potato | cytosol | 8.12 | 36.78 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.79 | 36.72 |
| CDY54588 | Canola | extracellular | 35.03 | 35.75 |
| CDY54196 | Canola | extracellular | 35.28 | 35.73 |
| CDY36628 | Canola | cytosol | 34.01 | 34.99 |
| CDX97555 | Canola | extracellular | 34.26 | 34.97 |
| CDY51412 | Canola | cytosol | 33.76 | 34.73 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 34.01 | 34.54 |
| CDY36623 | Canola | endoplasmic reticulum | 33.25 | 34.2 |
| CDX97556 | Canola | extracellular | 33.25 | 33.76 |
| KRH69020 | Soybean | extracellular | 29.7 | 33.43 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 30.96 | 33.33 |
| CDY30676 | Canola | cytosol | 21.32 | 33.07 |
| KRH13794 | Soybean | nucleus | 30.71 | 32.79 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 30.2 | 32.69 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 30.71 | 32.61 |
| KRG94370 | Soybean | extracellular | 30.2 | 32.6 |
| Solyc11g051060.1.1 | Tomato | vacuole | 29.7 | 32.5 |
| KRG97291 | Soybean | extracellular | 8.63 | 32.38 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 29.95 | 32.15 |
| CDY54194 | Canola | cytosol | 22.84 | 32.14 |
| CDY51410 | Canola | mitochondrion, plastid | 11.42 | 32.14 |
| KRH13793 | Soybean | nucleus | 29.95 | 31.98 |
| KRH47690 | Soybean | extracellular, vacuole | 29.7 | 31.97 |
| CDX97557 | Canola | extracellular | 29.95 | 31.64 |
| CDX98432 | Canola | extracellular | 29.95 | 31.64 |
| CDY24064 | Canola | plasma membrane | 29.95 | 31.38 |
| CDY30674 | Canola | extracellular, vacuole | 29.44 | 31.18 |
| CDY02490 | Canola | extracellular, vacuole | 29.19 | 31.0 |
| KRH07083 | Soybean | extracellular | 21.57 | 30.91 |
| CDY69407 | Canola | extracellular | 19.54 | 30.68 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 28.17 | 30.66 |
| CDY36617 | Canola | plasma membrane | 26.9 | 30.64 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 10.15 | 30.53 |
| CDX97558 | Canola | extracellular | 28.93 | 30.48 |
| CDX98433 | Canola | extracellular, vacuole | 28.93 | 30.48 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 28.43 | 30.19 |
| Solyc06g064960.2.1 | Tomato | extracellular | 27.92 | 30.05 |
| Solyc04g028470.1.1 | Tomato | cytosol | 24.37 | 30.0 |
| Solyc06g065010.2.1 | Tomato | nucleus | 27.41 | 29.83 |
| KRG97292 | Soybean | extracellular | 27.66 | 29.78 |
| PGSC0003DMT400074599 | Potato | cytosol | 24.87 | 29.61 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 5.33 | 29.58 |
| Solyc01g109020.1.1 | Tomato | extracellular | 14.21 | 29.47 |
| Solyc06g064990.2.1 | Tomato | extracellular | 28.93 | 29.46 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 27.41 | 29.43 |
| CDY69208 | Canola | mitochondrion | 23.1 | 29.17 |
| PGSC0003DMT400017106 | Potato | extracellular | 26.9 | 28.65 |
| Solyc06g064980.2.1 | Tomato | extracellular | 27.66 | 28.46 |
| CDY25680 | Canola | extracellular, plasma membrane | 11.93 | 28.14 |
| CDY02491 | Canola | plastid | 11.93 | 27.65 |
| KRH06260 | Soybean | cytosol, peroxisome | 18.78 | 27.21 |
| Solyc11g021040.1.1 | Tomato | extracellular | 14.21 | 26.79 |
| CDY71922 | Canola | extracellular, plasma membrane | 14.47 | 25.68 |
| CDY54198 | Canola | cytosol | 8.63 | 25.56 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 22.34 | 24.58 |
| Solyc11g051120.1.1 | Tomato | cytosol | 8.63 | 23.45 |
| CDX75755 | Canola | plastid | 21.07 | 19.35 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078J580 | UniProt:A0A078J580 | EnsemblPlants:CDY61480 | ProteinID:CDY61480 |
| ProteinID:CDY61480.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | GO:GO:0016788 |
| EnsemblPlantsGene:GSBRNA2T00033888001 | InterPro:IPR036514 | PFAM:PF00657 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF461 | InterPro:SGNH_hydro_sf |
| InterPro:SGNH_plant_lipase_like | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEE433 | SEG:seg | : |
Description
BnaC03g78280DBnaC03g78280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J580]
Coordinates
chrLK034000:-:26785..28971
Molecular Weight (calculated)
43351.9 Da
IEP (calculated)
6.418
GRAVY (calculated)
-0.054
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPKPHLFS LSFFSLLLLH FPTVSLAQTL FVFGDGLYDA GNKQFVSSNR VDASFPPYGM TVGEPTGRWS DGRIVPDYLA GFMGIPHIPP ILNGTADFSH
101: GANFAIADAT VLGSPAETLT FSQQVIKFSD NKNKWSAQAR SEAVYLFYIG SDDYLKFAKN NPNPSDDQKQ AFVDRVITAI EAELKVIYGS GGRKFALHNL
201: APLGCLPAVK QANGNVQECV TLPSEMAALH NKKLLQLLVE LSRQLSGFQY SFYDFFSSIK HRVIKSKTYT FETGMAACCG TGSVNGTSCS TNNVCAKPED
301: YLFFDGKHLT QEGNLQVGHL MWGADPVVVG PNNLRELLFL PLNTTVMLAD IQDAMAAMSP KQNKIESLYD IKMMESEMEN QWLYQVGKAV SFLI
101: GANFAIADAT VLGSPAETLT FSQQVIKFSD NKNKWSAQAR SEAVYLFYIG SDDYLKFAKN NPNPSDDQKQ AFVDRVITAI EAELKVIYGS GGRKFALHNL
201: APLGCLPAVK QANGNVQECV TLPSEMAALH NKKLLQLLVE LSRQLSGFQY SFYDFFSSIK HRVIKSKTYT FETGMAACCG TGSVNGTSCS TNNVCAKPED
301: YLFFDGKHLT QEGNLQVGHL MWGADPVVVG PNNLRELLFL PLNTTVMLAD IQDAMAAMSP KQNKIESLYD IKMMESEMEN QWLYQVGKAV SFLI
001: MLLIPSFTAN SNEPPPSKLS LSDLSMAILK SHFFLLFPLL LLHFHTVSFA QTLFVFGDGL YDAGNKQFLS QNRVDASFPP YGVTVGQATG RWSDGSIVPD
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
Arabidopsis Description
MVP1Inactive GDSL esterase/lipase-like protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA74]
SUBAcon: [nucleus,endoplasmic reticulum,vacuole]
SUBAcon: [nucleus,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.