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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • plastid 3
  • vacuole 4
  • extracellular 5
  • golgi 3
  • plasma membrane 3
  • endoplasmic reticulum 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g081170.1.1
Solyc01g109020.1.1
Solyc04g008430.1.1
Solyc04g028470.1.1
Solyc06g064960.2.1
Solyc06g064970.2.1
Solyc06g064980.2.1
Solyc06g064990.2.1
Solyc06g065010.2.1
Solyc11g021040.1.1
Solyc11g051060.1.1
Solyc11g051100.1.1
Solyc11g051120.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 Solyc04g008430.1.1 AT2G01950.1 19000166
AT1G54030.1 Solyc01g081170.1.1 AT1G52400.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc01g081170.1.1 AT3G09260.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc01g081170.1.1 AT3G21370.1 23155454
AT3G14220.1 Solyc04g008430.1.1 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g109020.1.1 Tomato extracellular 41.34 77.89
Solyc11g021040.1.1 Tomato extracellular 44.97 77.03
PGSC0003DMT400013272 Potato extracellular, vacuole 74.02 72.21
Solyc06g064960.2.1 Tomato extracellular 66.76 65.3
Solyc06g064980.2.1 Tomato extracellular 63.69 59.53
Solyc06g064990.2.1 Tomato extracellular 63.69 58.91
Solyc06g065010.2.1 Tomato nucleus 53.07 52.49
KRG97291 Soybean extracellular 15.08 51.43
Solyc11g051060.1.1 Tomato vacuole 48.04 47.78
AT1G53970.2 Thale cress cytosol 12.01 44.33
VIT_09s0002g00510.t01 Wine grape extracellular 43.3 42.01
VIT_09s0002g00520.t01 Wine grape extracellular 36.87 41.38
VIT_09s0002g00530.t01 Wine grape cytosol 39.39 40.99
KRH69020 Soybean extracellular 39.66 40.57
KRG97292 Soybean extracellular 41.06 40.16
KRG94370 Soybean extracellular 39.66 38.9
VIT_09s0002g00550.t01 Wine grape extracellular 39.11 38.46
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 39.11 38.25
VIT_09s0002g00540.t01 Wine grape extracellular 41.06 37.31
VIT_09s0002g00570.t01 Wine grape extracellular 38.55 37.2
Solyc12g049550.1.1 Tomato extracellular 37.71 36.99
KRH47690 Soybean extracellular, vacuole 37.71 36.89
VIT_09s0002g00500.t01 Wine grape cytosol 29.89 36.77
Bra030917.1-P Field mustard extracellular, vacuole 37.99 36.66
CDY02490 Canola extracellular, vacuole 37.99 36.66
KRH13794 Soybean nucleus 37.71 36.59
Solyc11g051120.1.1 Tomato cytosol 14.8 36.55
KRH07083 Soybean extracellular 27.93 36.36
KRH13793 Soybean nucleus 37.43 36.31
CDX98433 Canola extracellular, vacuole 37.71 36.1
Bra027356.1-P Field mustard extracellular 37.43 35.83
CDX97558 Canola extracellular 37.43 35.83
Bra030916.1-P Field mustard plastid 35.47 34.99
Bra039701.1-P Field mustard extracellular, plasma membrane 31.28 34.89
CDY24064 Canola plasma membrane 36.59 34.84
CDY36619 Canola endoplasmic reticulum, plasma membrane 36.03 34.77
Solyc04g028470.1.1 Tomato cytosol 31.01 34.69
CDY30674 Canola extracellular, vacuole 36.03 34.68
KRH06260 Soybean cytosol, peroxisome 26.26 34.56
CDY71922 Canola extracellular, plasma membrane 21.23 34.23
Bra014375.1-P Field mustard extracellular, vacuole 35.47 34.14
AT1G53940.2 Thale cress plasma membrane 34.64 32.98
CDY36617 Canola plasma membrane 31.84 32.95
AT5G40990.1 Thale cress plasma membrane 34.36 32.89
AT1G53990.1 Thale cress extracellular, plasma membrane 32.96 32.15
CDX97557 Canola extracellular 33.24 31.9
CDX98432 Canola extracellular 33.24 31.9
AT3G14225.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 33.52 31.83
Bra027357.1-P Field mustard extracellular 32.96 31.64
CDY54192 Canola extracellular 10.89 29.1
CDY69208 Canola mitochondrion 24.58 28.21
CDY69407 Canola extracellular 18.99 27.09
Solyc11g051100.1.1 Tomato cytosol, extracellular 5.03 25.35
Solyc04g007570.1.1 Tomato extracellular, plasma membrane, vacuole 24.02 23.56
CDX75755 Canola plastid 27.65 23.08
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 22.91 22.71
CDY61480 Canola extracellular, vacuole 24.58 22.34
Bra030911.1-P Field mustard extracellular, vacuole 24.58 22.28
CDY54197 Canola extracellular, vacuole 24.58 22.28
AT3G14220.1 Thale cress vacuole 22.35 22.04
CDY33240 Canola vacuole 22.07 22.01
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 23.74 21.85
CDY39106 Canola vacuole 21.79 21.73
Bra021542.1-P Field mustard vacuole 21.79 21.73
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 23.46 21.32
CDY30675 Canola endoplasmic reticulum, vacuole 22.91 21.3
AT1G54020.2 Thale cress endoplasmic reticulum 22.07 21.24
AT3G14210.1 Thale cress extracellular, golgi 23.18 21.17
CDY51412 Canola cytosol 22.63 21.15
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 22.63 21.15
CDY30680 Canola mitochondrion 23.74 21.04
CDY08211 Canola endoplasmic reticulum, vacuole 22.63 21.04
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 22.63 21.04
CDX97555 Canola extracellular 22.63 20.98
Bra030915.1-P Field mustard extracellular 22.63 20.98
Bra037957.1-P Field mustard extracellular 22.35 20.89
CDX98428 Canola extracellular, plasma membrane, vacuole 22.35 20.62
Bra027359.1-P Field mustard extracellular 21.51 20.48
CDY54591 Canola extracellular 22.07 20.41
CDY36623 Canola endoplasmic reticulum 21.79 20.37
CDY36628 Canola cytosol 21.79 20.37
Bra027358.1-P Field mustard extracellular 22.07 20.36
CDX97556 Canola extracellular 22.07 20.36
Bra014372.1-P Field mustard extracellular 21.79 20.31
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 21.79 20.31
AT1G54010.1 Thale cress extracellular 21.51 19.95
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 21.51 19.69
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 22.35 19.18
CDY54588 Canola extracellular 20.67 19.17
CDY54196 Canola extracellular 20.67 19.02
CDY54194 Canola cytosol 13.69 17.5
Bra030913.1-P Field mustard cytosol 13.69 17.5
CDY08214 Canola cytosol 12.85 16.67
Bra030912.1-P Field mustard extracellular 20.67 16.63
CDY30676 Canola cytosol 11.17 15.75
CDY36625 Canola extracellular 3.63 9.56
CDY54198 Canola cytosol 3.07 8.27
CDY51410 Canola mitochondrion, plastid 2.79 7.14
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016788InterPro:IPR036514UniProt:K4C7C6
PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF262InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:Solyc06g064970.2
EnsemblPlants:Solyc06g064970.2.1TMHMM:TMhelixUniParc:UPI00027670F0:::
Description
No Description!
Coordinates
chr6:+:40517717..40519191
Molecular Weight (calculated)
40522.5 Da
IEP (calculated)
9.463
GRAVY (calculated)
0.094
Length
358 amino acids
Sequence
(BLAST)
001: MLVTIIFSIK IYPIYFKVVD AADTGIFLIK LRIRSTIYII ILNQTYNTVM ALISSLCIFV LVAHFATPIV CHERHHQAAL FVFGDSIFDP GNNKYINPNT
101: NPQGSNNFPY GESFFKYPTG RASDGRLVPD FIAEYANLPF IPPYFEIGKE HFIHGVNFAS AGSGCLAETN RGSVIDLKTQ LKLFQNVTQL LKKKMGETES
201: KQILSNAVYI FSPANNDFLF PFLANLTSPY SDTEYQQMVM GNLTSVLKGI YKEGGRKFVM FNVAPLGCVP SMRALNLQKG VTNGSCMEEA TDKAKTFNSA
301: LPRMFKKLEK QLPGFKYTIF NFFKVFADSI NNPTKYGIFY LIEFKIKYLY VRLYIVQC
Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)
001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP
Arabidopsis Description
GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.