Factsheet for Solyc04g007570.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400096676	Potato	mitochondrion	84.11	72.75
VIT_01s0011g04540.t01	Wine grape	extracellular	70.14	71.31
AT1G71120.1	Thale cress	endoplasmic reticulum	65.75	66.3
Bra007962.1-P	Field mustard	extracellular, vacuole	64.11	66.1
CDY09515	Canola	endoplasmic reticulum, extracellular, golgi	22.74	63.36
Solyc06g064960.2.1	Tomato	extracellular	31.51	31.42
Solyc12g049550.1.1	Tomato	extracellular	31.23	31.23
Solyc06g065010.2.1	Tomato	nucleus	30.14	30.39
Solyc11g051060.1.1	Tomato	vacuole	29.86	30.28
Solyc06g064990.2.1	Tomato	extracellular	31.78	29.97
Solyc06g064980.2.1	Tomato	extracellular	31.23	29.77
Solyc01g109020.1.1	Tomato	extracellular	15.07	28.95
Solyc11g021040.1.1	Tomato	extracellular	16.44	28.71
Solyc04g028470.1.1	Tomato	cytosol	24.38	27.81
Solyc06g064970.2.1	Tomato	extracellular, vacuole	23.56	24.02
Solyc11g051100.1.1	Tomato	cytosol, extracellular	4.11	21.13
Solyc11g051120.1.1	Tomato	cytosol	6.85	17.24

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016298
GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	UniProt:K4BNR4	InterPro:Lipase_GDSL_AS	PFAM:PF00657
ScanProsite:PS01098	PFscan:PS51257	PANTHER:PTHR22835	PANTHER:PTHR22835:SF187	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
SUPFAM:SSF52266	EnsemblPlantsGene:Solyc04g007570.1	EnsemblPlants:Solyc04g007570.1.1	TMHMM:TMhelix	UniParc:UPI0002766B9A	:

Description

No Description!

Coordinates

chr4:+:1254411..1257651

Molecular Weight (calculated)

40727.9 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.059

Length

365 amino acids

Sequence
(BLAST)

001: MERVKKNQFI FVSYFLVINS IISCVLGFNV PSIFIFGDSI FDAGNNHYNK NCTAQADFPP YGSNFFHHPT GRFTNGRTVA DFISQFIGIP LQSPFLEAQL
101: ELINGSRKKY PSNGINFASA GSGVLSTTNQ DLGVTPIQDQ IQQFKTLVQQ NHITKKQIQQ SLFFFESGSN DIFSYFYPFD APTLAPNAYV QAMLDQVTSF
201: VDEICKLGAR RIALFSLGPV GCVPARTLLP GAPIDKCYGK MNKMVKNYNM GLESLVKIIP TKYYPGSFAV FGDVYKIVQI FEANPKHYGF SDVTNACCGD
301: GTLGGLLQCG KEGYKICANP NEYLFWDYFH PSEHTYNLIS KALWNGIHTK IRPINLKTLA NMTLT

Best Arabidopsis Sequence Match ( AT1G71120.1 )
(BLAST)

001: MSSSSSMDLL MCLLLLISPV VLAKSSSTVP AIFTFGDSIF DAGNNHYNKN CTAQADFPPY GSSFFHRPTG RFTNGRTVAD FISEFVGLPL QKPFLELQIQ
101: ILNGTSNFSN GINFASAGSG LLLDTNKFMG VTPIQTQLQQ FQTLVEQNLI EKSIIQESLF LLETGSNDIF NYFLPFRAPT LSPDAYVNAM LDQVNKTIDQ
201: IYKLGARRIA FFSLGPVGCV PARAMLPNAP TNKCFGKMNV MAKMYNKRLE DIVNIIPTKY PGAIAVFGAV YGITHRFQTY PARYGFSDVS NACCGNGTLG
301: GLMQCGREGY KICNNPNEFL FWDFYHPTEH TYRLMSKALW NGNKNHIRPF NLMALATNKI TF

Arabidopsis Description

GLIP6GLIP6 [Source:UniProtKB/TrEMBL;Acc:A0A178WCW6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.