Factsheet for AT1G71120.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 7
golgi 5
extracellular 5
vacuole 5
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007962.1-P	Field mustard	extracellular, vacuole	85.08	87.01
CDY09515	Canola	endoplasmic reticulum, extracellular, golgi	29.83	82.44
VIT_01s0011g04540.t01	Wine grape	extracellular	66.02	66.57
Solyc04g007570.1.1	Tomato	extracellular, plasma membrane, vacuole	66.3	65.75
PGSC0003DMT400096676	Potato	mitochondrion	59.67	51.18
AT1G53970.2	Thale cress	cytosol	8.56	31.96
AT1G53920.1	Thale cress	cytosol	31.49	29.61
AT5G40990.1	Thale cress	plasma membrane	30.11	29.14
AT1G53990.1	Thale cress	extracellular, plasma membrane	28.45	28.07
AT1G53940.2	Thale cress	plasma membrane	29.01	27.93
AT3G14225.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	28.73	27.59
AT3G14220.1	Thale cress	vacuole	25.41	25.34
AT1G54020.2	Thale cress	endoplasmic reticulum	25.69	25.0
AT3G14210.1	Thale cress	extracellular, golgi	26.52	24.49
AT1G54010.1	Thale cress	extracellular	24.86	23.32
AT1G54000.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	24.86	23.02
AT1G54030.1	Thale cress	endoplasmic reticulum, nucleus, vacuole	24.03	20.86

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EntrezGene:843452	UniProt:A0A178WCW6	ProteinID:AAG51687.1	ProteinID:AEE35163.1
ArrayExpress:AT1G71120	EnsemblPlantsGene:AT1G71120	RefSeq:AT1G71120	TAIR:AT1G71120	RefSeq:AT1G71120-TAIR-G	EnsemblPlants:AT1G71120.1
TAIR:AT1G71120.1	Unigene:At.35228	InterPro:GDSL	Symbol:GLIP6	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005576	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016298	GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	RefSeq:NP_177268.1
ProteinID:OAP16267.1	PFAM:PF00657	PO:PO:0000293	PANTHER:PTHR22835	PANTHER:PTHR22835:SF187	UniProt:Q9C996
InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI000009CAAA	SEG:seg

Description

GLIP6GLIP6 [Source:UniProtKB/TrEMBL;Acc:A0A178WCW6]

Coordinates

chr1:-:26821072..26822487

Molecular Weight (calculated)

40226.6 Da

IEP (calculated)

8.692

GRAVY (calculated)

-0.013

Length

362 amino acids

Sequence
(BLAST)

001: MSSSSSMDLL MCLLLLISPV VLAKSSSTVP AIFTFGDSIF DAGNNHYNKN CTAQADFPPY GSSFFHRPTG RFTNGRTVAD FISEFVGLPL QKPFLELQIQ
101: ILNGTSNFSN GINFASAGSG LLLDTNKFMG VTPIQTQLQQ FQTLVEQNLI EKSIIQESLF LLETGSNDIF NYFLPFRAPT LSPDAYVNAM LDQVNKTIDQ
201: IYKLGARRIA FFSLGPVGCV PARAMLPNAP TNKCFGKMNV MAKMYNKRLE DIVNIIPTKY PGAIAVFGAV YGITHRFQTY PARYGFSDVS NACCGNGTLG
301: GLMQCGREGY KICNNPNEFL FWDFYHPTEH TYRLMSKALW NGNKNHIRPF NLMALATNKI TF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.