Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G53940.2 | Thale cress | plasma membrane | 81.82 | 81.38 |
| Bra039701.1-P | Field mustard | extracellular, plasma membrane | 66.58 | 77.57 |
| CDY24064 | Canola | plasma membrane | 77.81 | 77.39 |
| CDY36617 | Canola | plasma membrane | 70.59 | 76.3 |
| AT1G53970.2 | Thale cress | cytosol | 19.79 | 76.29 |
| AT1G53990.1 | Thale cress | extracellular, plasma membrane | 73.26 | 74.66 |
| AT3G14225.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 65.51 | 64.99 |
| Solyc01g109020.1.1 | Tomato | extracellular | 24.6 | 48.42 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 47.33 | 48.23 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 46.52 | 48.07 |
| Solyc11g051060.1.1 | Tomato | vacuole | 46.26 | 48.06 |
| AT1G53920.1 | Thale cress | cytosol | 49.2 | 47.79 |
| Solyc06g065010.2.1 | Tomato | nucleus | 45.99 | 47.51 |
| Solyc11g021040.1.1 | Tomato | extracellular | 26.2 | 46.89 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 8.82 | 46.48 |
| PGSC0003DMT400016123 | Potato | cytosol | 10.43 | 44.83 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 42.78 | 43.6 |
| Solyc06g064960.2.1 | Tomato | extracellular | 42.25 | 43.17 |
| PGSC0003DMT400017106 | Potato | extracellular | 42.51 | 42.97 |
| Solyc06g064980.2.1 | Tomato | extracellular | 43.85 | 42.82 |
| Solyc06g064990.2.1 | Tomato | extracellular | 43.85 | 42.38 |
| PGSC0003DMT400074599 | Potato | cytosol | 37.17 | 41.99 |
| Solyc04g028470.1.1 | Tomato | cytosol | 33.69 | 39.38 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 32.89 | 34.36 |
| Solyc11g051120.1.1 | Tomato | cytosol | 11.76 | 30.34 |
| AT1G71120.1 | Thale cress | endoplasmic reticulum | 29.14 | 30.11 |
| AT3G14220.1 | Thale cress | vacuole | 27.01 | 27.82 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 27.54 | 27.69 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 29.95 | 26.86 |
| AT1G54010.1 | Thale cress | extracellular | 27.01 | 26.17 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 26.74 | 25.58 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 26.47 | 25.26 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:834101 | ProteinID:AED94623.1 | ArrayExpress:AT5G40990 | EnsemblPlantsGene:AT5G40990 |
| RefSeq:AT5G40990 | TAIR:AT5G40990 | RefSeq:AT5G40990-TAIR-G | EnsemblPlants:AT5G40990.1 | TAIR:AT5G40990.1 | ProteinID:BAB09701.1 |
| InterPro:GDSL | Symbol:GLIP1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006629 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009620 | GO:GO:0009627 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009817 |
| GO:GO:0009866 | GO:GO:0009871 | GO:GO:0009873 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016042 | GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | GO:GO:0042742 | GO:GO:0050832 |
| InterPro:IPR036514 | InterPro:Lipase_GDSL_AS | RefSeq:NP_198915.1 | PFAM:PF00657 | PO:PO:0009047 | ScanProsite:PS01098 |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF301 | UniProt:Q9FLN0 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 |
| TMHMM:TMhelix | UniParc:UPI0000048BE2 | SEG:seg | : | : | : |
Description
GLIP1GDSL esterase/lipase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLN0]
Coordinates
chr5:+:16418842..16420616
Molecular Weight (calculated)
41708.5 Da
IEP (calculated)
7.070
GRAVY (calculated)
-0.205
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSQLVSIT FLAYTIIISI GSINCIDNNN LVTNQSALFV FGDSVFDAGN NNYIDTLSSV RSNYWPYGQT TFKSPTGRVS DGRLIPDFIA EYAWLPLIPP
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.