Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 78.75 | 77.9 |
| CDY02490 | Canola | extracellular, vacuole | 75.75 | 74.93 |
| Bra030917.1-P | Field mustard | extracellular, vacuole | 75.75 | 74.93 |
| CDY69407 | Canola | extracellular | 51.23 | 74.9 |
| Bra030916.1-P | Field mustard | plastid | 73.3 | 74.1 |
| AT5G40990.1 | Thale cress | plasma membrane | 74.66 | 73.26 |
| AT1G53940.2 | Thale cress | plasma membrane | 74.11 | 72.34 |
| CDY30674 | Canola | extracellular, vacuole | 72.75 | 71.77 |
| Bra014375.1-P | Field mustard | extracellular, vacuole | 72.48 | 71.51 |
| CDY69208 | Canola | mitochondrion | 59.95 | 70.51 |
| AT3G14225.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 69.21 | 67.37 |
| AT1G53970.2 | Thale cress | cytosol | 16.35 | 61.86 |
| PGSC0003DMT400016123 | Potato | cytosol | 10.9 | 45.98 |
| Solyc11g051060.1.1 | Tomato | vacuole | 44.96 | 45.83 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 45.78 | 45.78 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 8.72 | 45.07 |
| AT1G53920.1 | Thale cress | cytosol | 47.14 | 44.94 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 44.14 | 44.75 |
| Solyc06g065010.2.1 | Tomato | nucleus | 43.87 | 44.48 |
| Solyc11g021040.1.1 | Tomato | extracellular | 23.98 | 42.11 |
| Solyc01g109020.1.1 | Tomato | extracellular | 21.53 | 41.58 |
| Solyc06g064960.2.1 | Tomato | extracellular | 41.14 | 41.26 |
| Solyc06g064990.2.1 | Tomato | extracellular | 43.32 | 41.09 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 40.6 | 40.6 |
| PGSC0003DMT400017106 | Potato | extracellular | 40.33 | 40.0 |
| Solyc06g064980.2.1 | Tomato | extracellular | 40.87 | 39.16 |
| PGSC0003DMT400074599 | Potato | cytosol | 34.88 | 38.67 |
| Solyc04g028470.1.1 | Tomato | cytosol | 31.88 | 36.56 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 32.15 | 32.96 |
| AT3G14220.1 | Thale cress | vacuole | 28.34 | 28.65 |
| AT1G71120.1 | Thale cress | endoplasmic reticulum | 28.07 | 28.45 |
| Solyc11g051120.1.1 | Tomato | cytosol | 11.17 | 28.28 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 30.52 | 26.86 |
| AT1G54010.1 | Thale cress | extracellular | 27.25 | 25.91 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 26.16 | 25.81 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 26.43 | 24.81 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 25.34 | 23.72 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:841837 | ProteinID:AAD25771.1 | ProteinID:AEE33032.1 | ArrayExpress:AT1G53990 |
| EnsemblPlantsGene:AT1G53990 | RefSeq:AT1G53990 | TAIR:AT1G53990 | RefSeq:AT1G53990-TAIR-G | EnsemblPlants:AT1G53990.1 | TAIR:AT1G53990.1 |
| Unigene:At.37298 | InterPro:GDSL | Symbol:GLIP3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 |
| GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | InterPro:Lipase_GDSL_AS | RefSeq:NP_175801.1 |
| PFAM:PF00657 | PO:PO:0009005 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF301 | UniProt:Q9SYF5 |
| InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | UniParc:UPI000004839A | SEG:seg |
Description
GLIP3GDSL esterase/lipase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF5]
Coordinates
chr1:+:20151016..20152752
Molecular Weight (calculated)
41112.0 Da
IEP (calculated)
9.212
GRAVY (calculated)
-0.233
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRLVLIIFF VYTIILSIGS INCIDNNNLV TNQAALFVFG DSLFDAGNNN YINTVSSFRS NIWPYGQTNF KFPTGRLSDG PEKAWLPSIP PNLQPNNGNN
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.