Factsheet for Bra030917.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02490	Canola	extracellular, vacuole	100.0	100.0
Bra030916.1-P	Field mustard	plastid	81.94	83.75
Bra014375.1-P	Field mustard	extracellular, vacuole	77.63	77.42
AT1G53990.1	Thale cress	extracellular, plasma membrane	74.93	75.75
Bra039701.1-P	Field mustard	extracellular, plasma membrane	62.53	72.27
Bra027357.1-P	Field mustard	extracellular	65.23	64.88
Bra027356.1-P	Field mustard	extracellular	60.11	59.63
Solyc01g109020.1.1	Tomato	extracellular	26.42	51.58
Solyc11g021040.1.1	Tomato	extracellular	28.84	51.2
PGSC0003DMT400016123	Potato	cytosol	11.59	49.43
PGSC0003DMT400080416	Potato	golgi, vacuole	47.98	49.17
Solyc06g065010.2.1	Tomato	nucleus	47.17	48.34
Solyc11g051060.1.1	Tomato	vacuole	46.9	48.33
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	47.71	48.23
PGSC0003DMT400013272	Potato	extracellular, vacuole	46.9	47.41
Solyc06g064960.2.1	Tomato	extracellular	46.09	46.72
Bra030918.1-P	Field mustard	plastid	38.54	45.98
Solyc06g064980.2.1	Tomato	extracellular	47.44	45.95
Solyc06g064990.2.1	Tomato	extracellular	47.71	45.74
PGSC0003DMT400017106	Potato	extracellular	45.55	45.68
Solyc11g051100.1.1	Tomato	cytosol, extracellular	8.63	45.07
PGSC0003DMT400074599	Potato	cytosol	35.04	39.27
Solyc06g064970.2.1	Tomato	extracellular, vacuole	36.66	37.99
Solyc04g028470.1.1	Tomato	cytosol	32.61	37.81
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	32.34	30.46
Solyc11g051120.1.1	Tomato	cytosol	11.59	29.66
Bra030911.1-P	Field mustard	extracellular, vacuole	31.54	29.62
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	30.46	29.05
Bra007962.1-P	Field mustard	extracellular, vacuole	27.49	28.81
Bra021542.1-P	Field mustard	vacuole	26.95	27.86
Bra037957.1-P	Field mustard	extracellular	28.57	27.68
Bra030915.1-P	Field mustard	extracellular	28.3	27.2
Bra027359.1-P	Field mustard	extracellular	26.95	26.6
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	27.22	26.37
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	27.22	26.23
Bra014372.1-P	Field mustard	extracellular	26.68	25.78
Bra027358.1-P	Field mustard	extracellular	26.68	25.52
Bra030913.1-P	Field mustard	cytosol	18.06	23.93
Bra030912.1-P	Field mustard	extracellular	26.42	22.02

Protein Annotations

EMBL:AY101366	EnsemblPlants:Bra030917.1	EnsemblPlants:Bra030917.1-P	EnsemblPlantsGene:Bra030917	Gene3D:3.40.50.1110	GO:GO:0003674
GO:GO:0003824	GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835	PANTHER:PTHR22835:SF301	PFAM:PF00657	ProteinID:AAM47031	ProteinID:AAM47031.1
SignalP:SignalP-noTM	SUPFAM:SSF52266	UniParc:UPI00000A6BE7	UniProt:Q8L8G1	MapMan:35.1	:

Description

AT1G53990 (E=5e-161) GLIP3 | GLIP3; carboxylesterase/ lipase

Coordinates

chrA08:-:768318..770069

Molecular Weight (calculated)

41174.1 Da

IEP (calculated)

8.257

GRAVY (calculated)

-0.136

Length

371 amino acids

Sequence
(BLAST)

001: MKSSRLFSTI LFLYTIILSI SSINCKENNN NLVTNQAALF VFGDSLFDVG NNNYINTTTR SNFFPYGQTF FKVPTGRVSD GRLITDFIAE KAWLPLIPPN
101: LQPGNSNSQL TYGVNFASAG AGALVETFPG MVIDLGTQLN SFRNVERSLR SALGDAEAKK IFSRAVYMFS IGSNDLFFPL VANSSLFQSN TKERFVDFVI
201: GNTTSVLEEV YKMGGRKFGF LNMGAYECAP PSLLLDPTNI GSCSKPVAEL INLHNKKFPD ALNRLQRELS GFRYALHDYH TSLLDRINNP SKYGFKVGQM
301: GCCGSGPFRG INTCGGRMGQ SYELCENVND YLFFDSSHLT EKAHQQIAEL VWSGPPNVTR PYNLKALFEL N

Best Arabidopsis Sequence Match ( AT1G53990.1 )
(BLAST)

001: MVRLVLIIFF VYTIILSIGS INCIDNNNLV TNQAALFVFG DSLFDAGNNN YINTVSSFRS NIWPYGQTNF KFPTGRLSDG PEKAWLPSIP PNLQPNNGNN
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT

Arabidopsis Description

GLIP3GDSL esterase/lipase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.