Factsheet for Bra030912.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54010.1	Bra024839.1-P	AT2G01950.1	19000166
AT1G54010.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54196	Canola	extracellular	83.15	95.12
CDY54588	Canola	extracellular	81.8	94.3
Bra014372.1-P	Field mustard	extracellular	70.34	81.51
Bra030915.1-P	Field mustard	extracellular	69.21	79.79
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	65.17	75.32
AT1G54010.1	Thale cress	extracellular	64.27	74.09
AT1G54000.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	62.92	71.61
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	55.96	65.01
Bra027358.1-P	Field mustard	extracellular	55.73	63.92
Bra027359.1-P	Field mustard	extracellular	52.81	62.5
Bra037957.1-P	Field mustard	extracellular	53.71	62.4
Bra030913.1-P	Field mustard	cytosol	35.51	56.43
Bra021542.1-P	Field mustard	vacuole	36.85	45.68
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	32.13	36.29
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	31.01	35.48
Bra030911.1-P	Field mustard	extracellular, vacuole	31.46	35.44
KRG97291	Soybean	extracellular	7.42	31.43
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	24.94	30.33
VIT_09s0002g00570.t01	Wine grape	extracellular	24.72	29.65
VIT_09s0002g00550.t01	Wine grape	extracellular	23.82	29.12
KRH47690	Soybean	extracellular, vacuole	23.37	28.42
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	23.37	28.34
KRH69020	Soybean	extracellular	22.25	28.29
Bra027357.1-P	Field mustard	extracellular	23.6	28.15
KRH07083	Soybean	extracellular	17.3	28.0
KRH13794	Soybean	nucleus	23.15	27.91
Solyc11g051060.1.1	Tomato	vacuole	22.25	27.5
KRH13793	Soybean	nucleus	22.7	27.37
Bra027356.1-P	Field mustard	extracellular	22.92	27.27
Bra030917.1-P	Field mustard	extracellular, vacuole	22.02	26.42
KRG94370	Soybean	extracellular	21.57	26.3
Bra030916.1-P	Field mustard	plastid	21.35	26.17
Bra007962.1-P	Field mustard	extracellular, vacuole	20.67	25.99
PGSC0003DMT400017106	Potato	extracellular	21.57	25.95
Bra039701.1-P	Field mustard	extracellular, plasma membrane	18.65	25.86
Bra014375.1-P	Field mustard	extracellular, vacuole	21.57	25.81
Solyc06g065010.2.1	Tomato	nucleus	20.67	25.41
Solyc11g051100.1.1	Tomato	cytosol, extracellular	4.04	25.35
Solyc06g064960.2.1	Tomato	extracellular	20.67	25.14
Solyc06g064980.2.1	Tomato	extracellular	21.57	25.07
KRG97292	Soybean	extracellular	20.45	24.86
PGSC0003DMT400013272	Potato	extracellular, vacuole	20.45	24.8
PGSC0003DMT400074599	Potato	cytosol	18.2	24.47
PGSC0003DMT400080416	Potato	golgi, vacuole	19.78	24.31
KRH06260	Soybean	cytosol, peroxisome	14.83	24.26
PGSC0003DMT400016123	Potato	cytosol	4.72	24.14
Solyc04g028470.1.1	Tomato	cytosol	17.08	23.75
Solyc06g064990.2.1	Tomato	extracellular	20.45	23.51
Solyc11g051120.1.1	Tomato	cytosol	7.64	23.45
Bra030918.1-P	Field mustard	plastid	16.18	23.15
Solyc01g109020.1.1	Tomato	extracellular	9.66	22.63
Solyc11g021040.1.1	Tomato	extracellular	10.11	21.53
Solyc06g064970.2.1	Tomato	extracellular, vacuole	16.63	20.67

Protein Annotations

EnsemblPlants:Bra030912.1	EnsemblPlants:Bra030912.1-P	EnsemblPlantsGene:Bra030912	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF485	PFAM:PF00657	SignalP:SignalP-noTM	SUPFAM:SSF52266	TMHMM:TMhelix
UniParc:UPI000254561F	UniProt:M4EQ41	MapMan:35.1	:	:	:

Description

AT1G54010 (E=4e-166) | myrosinase-associated protein, putative

Coordinates

chrA08:+:736347..741900

Molecular Weight (calculated)

49072.5 Da

IEP (calculated)

8.684

GRAVY (calculated)

-0.219

Length

445 amino acids

Sequence
(BLAST)

001: MAGKCTLASV LGLLLVFTLF QNPLTVCGQS IPAVALFTFG DSNFDAGNKQ TLTQVNVAQG FWPYGKSRDD PNGKFSDGFI APDFVATFME IPIPIPAALK
101: PGVNVSRGAS FAVADATLLG APVQSLTLYQ QITKFNEMKA ANWNDDFIKQ SLFMIYIGAN DYFNFTKNNP NADASAQQAF VTSVTNQLKN EISFLYASGA
201: RKLMIQTLAP LGCLPIVRQD YRTGMEQCYE PLNNLAIQHN EKIGPMLNEM ALNAPDFQFT VFDFYNVILR RITPQRSLGY RFLRTNVSCC GIGTHTAYGC
301: GLPNVHSKLC SYQRSYLFFD GRHNTEKAQE SFGHLMFGAD PNVIQPMNIR ELVTYPVGEP MRTPELTPHR EHDQSLLRHG KRSRRGTDSI GSSLIGTKQS
401: LSVSFIYGLD QSLKSSFERS TDNGKLSTKS SGNLPKSSFQ SGSNG

Best Arabidopsis Sequence Match ( AT1G54010.1 )
(BLAST)

001: MMAKNCNLVS VLCVFLVLTL FNKPITVAGQ NIPAVGLFTF GDSNFDAGNK QTLTKTLLPQ TFWPYGKSRD DPNGKFSDGL IAPDFLAKFM RIPIVIPPAL
101: QPNVNVSRGA SFAVADATLL GAPVESLTLN QQVRKFNQMK AANWNDDFVK KSVFMIYIGA NDYLNFTKNN PNADASTQQA FVTSVTNKLK NDISLLYSSG
201: ASKFVIQTLA PLGCLPIVRQ EFNTGMDQCY EKLNDLAKQH NEKIGPMLNE LARTAPASAP FQFTVFDFYN AILTRTQRNQ NFRFFVTNAS CCGVGTHDAY
301: GCGFPNVHSR LCEYQRSYLF FDGRHNTEKA QEMFGHLLFG ADTNVIQPMN IRELVVYPAD EPMRESWVPP TSATVQLRES RGYEYY

Arabidopsis Description

GLL23Inactive GDSL esterase/lipase-like protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4H8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.