Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 2
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g081170.1.1
Solyc01g109020.1.1
Solyc04g008430.1.1
Solyc04g028470.1.1
Solyc06g064960.2.1
Solyc06g064970.2.1
Solyc06g064980.2.1
Solyc06g064990.2.1
Solyc06g065010.2.1
Solyc11g021040.1.1
Solyc11g051060.1.1
Solyc11g051100.1.1
Solyc11g051120.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 Solyc04g008430.1.1 AT2G01950.1 19000166
AT1G54030.1 Solyc01g081170.1.1 AT1G52400.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc01g081170.1.1 AT3G09260.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc01g081170.1.1 AT3G21370.1 23155454
AT3G14220.1 Solyc04g008430.1.1 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400017106 Potato extracellular 82.76 32.43
Solyc11g021040.1.1 Tomato extracellular 24.14 16.75
KRH06260 Soybean cytosol, peroxisome 30.34 16.18
Solyc06g064960.2.1 Tomato extracellular 40.69 16.12
VIT_09s0002g00500.t01 Wine grape cytosol 31.72 15.81
Solyc06g065010.2.1 Tomato nucleus 37.24 14.92
Solyc06g064970.2.1 Tomato extracellular, vacuole 36.55 14.8
VIT_09s0002g00520.t01 Wine grape extracellular 32.41 14.73
VIT_09s0002g00530.t01 Wine grape cytosol 34.48 14.53
Solyc11g051060.1.1 Tomato vacuole 35.86 14.44
CDY69407 Canola extracellular 24.83 14.34
VIT_09s0002g00510.t01 Wine grape extracellular 35.17 13.82
KRH47690 Soybean extracellular, vacuole 34.48 13.66
Solyc06g064980.2.1 Tomato extracellular 35.86 13.58
VIT_09s0002g00540.t01 Wine grape extracellular 36.55 13.45
Solyc06g064990.2.1 Tomato extracellular 35.86 13.44
VIT_09s0002g00570.t01 Wine grape extracellular 33.79 13.21
KRG97292 Soybean extracellular 33.1 13.11
KRH13793 Soybean nucleus 33.1 13.01
KRH13794 Soybean nucleus 33.1 13.01
Solyc12g049550.1.1 Tomato extracellular 32.41 12.88
VIT_09s0002g00550.t01 Wine grape extracellular 31.72 12.64
KRG94370 Soybean extracellular 31.72 12.6
KRH69020 Soybean extracellular 30.34 12.57
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 31.72 12.57
CDY69208 Canola mitochondrion 26.21 12.18
Solyc01g109020.1.1 Tomato extracellular 15.86 12.11
Bra027357.1-P Field mustard extracellular 30.34 11.8
CDX97557 Canola extracellular 30.34 11.8
CDX98432 Canola extracellular 30.34 11.8
AT5G40990.1 Thale cress plasma membrane 30.34 11.76
CDY08214 Canola cytosol 22.07 11.59
Bra030917.1-P Field mustard extracellular, vacuole 29.66 11.59
CDY02490 Canola extracellular, vacuole 29.66 11.59
CDY36617 Canola plasma membrane 27.59 11.56
AT3G14225.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 29.66 11.41
AT1G53990.1 Thale cress extracellular, plasma membrane 28.28 11.17
CDY24064 Canola plasma membrane 27.59 10.64
AT1G53940.2 Thale cress plasma membrane 26.9 10.37
KRH07083 Soybean extracellular 19.31 10.18
CDY36619 Canola endoplasmic reticulum, plasma membrane 25.52 9.97
CDY30674 Canola extracellular, vacuole 25.52 9.95
Bra030916.1-P Field mustard plastid 24.83 9.92
CDX98433 Canola extracellular, vacuole 25.52 9.89
CDY30676 Canola cytosol 17.24 9.84
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 24.14 9.7
Solyc04g028470.1.1 Tomato cytosol 21.38 9.69
Bra014375.1-P Field mustard extracellular, vacuole 24.83 9.68
Bra027356.1-P Field mustard extracellular 24.83 9.63
CDX97558 Canola extracellular 24.83 9.63
CDY54197 Canola extracellular, vacuole 24.83 9.11
Bra030911.1-P Field mustard extracellular, vacuole 24.83 9.11
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 24.14 8.88
CDY54196 Canola extracellular 23.45 8.74
CDY61480 Canola extracellular, vacuole 23.45 8.63
Bra030915.1-P Field mustard extracellular 22.76 8.55
AT1G54010.1 Thale cress extracellular 22.76 8.55
CDY54588 Canola extracellular 22.76 8.55
CDY54591 Canola extracellular 22.76 8.53
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 22.76 8.48
Solyc11g051100.1.1 Tomato cytosol, extracellular 4.14 8.45
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 22.76 8.44
CDY30680 Canola mitochondrion 23.45 8.42
CDY33240 Canola vacuole 20.69 8.36
CDY36628 Canola cytosol 22.07 8.36
Bra037957.1-P Field mustard extracellular 22.07 8.36
CDY39106 Canola vacuole 20.0 8.08
Bra021542.1-P Field mustard vacuole 20.0 8.08
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 21.38 8.07
Bra014372.1-P Field mustard extracellular 21.38 8.07
CDY08211 Canola endoplasmic reticulum, vacuole 21.38 8.05
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 21.38 8.05
CDY30675 Canola endoplasmic reticulum, vacuole 21.38 8.05
AT3G14220.1 Thale cress vacuole 20.0 7.99
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 22.76 7.91
CDY54194 Canola cytosol 15.17 7.86
Bra030913.1-P Field mustard cytosol 15.17 7.86
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 20.69 7.83
CDY51412 Canola cytosol 20.69 7.83
AT1G54020.2 Thale cress endoplasmic reticulum 20.0 7.8
AT3G14210.1 Thale cress extracellular, golgi 20.69 7.65
Bra030912.1-P Field mustard extracellular 23.45 7.64
CDX97555 Canola extracellular 19.31 7.25
Bra027358.1-P Field mustard extracellular 19.31 7.22
CDX97556 Canola extracellular 19.31 7.22
CDX98428 Canola extracellular, plasma membrane, vacuole 19.31 7.22
CDY36623 Canola endoplasmic reticulum 18.62 7.05
Bra027359.1-P Field mustard extracellular 17.93 6.91
Bra039701.1-P Field mustard extracellular, plasma membrane 15.17 6.85
Solyc04g007570.1.1 Tomato extracellular, plasma membrane, vacuole 17.24 6.85
CDX75755 Canola plastid 18.62 6.29
CDY71922 Canola extracellular, plasma membrane 8.28 5.41
AT1G53970.2 Thale cress cytosol 2.07 3.09
CDY54198 Canola cytosol 2.76 3.01
CDY36625 Canola extracellular 2.76 2.94
KRG97291 Soybean extracellular 2.07 2.86
CDY54192 Canola extracellular 2.07 2.24
CDY51410 Canola mitochondrion, plastid 0.69 0.71
Protein Annotations
EnsemblPlants:Solyc11g051120.1.1EnsemblPlantsGene:Solyc11g051120.1PANTHER:PTHR22835PANTHER:PTHR22835:SF262UniParc:UPI000276A927UniProt:K4D8S2
MapMan:35.2:::::
Description
No Description!
Coordinates
chr11:-:17487477..17488638
Molecular Weight (calculated)
16656.1 Da
IEP (calculated)
9.417
GRAVY (calculated)
-0.208
Length
145 amino acids
Sequence
(BLAST)
001: MAFSTNLFHV IDLQTQLTHF GEVVELSVNK LGSQQSQQLL TDFVYMFSTG SNDYAFPYLT NPKKFPFLKN NFHRWYWVIL LLFYRQFTNY NKGGRKFTIF
101: TLPPEGCSPG GRAFNAQIGG KSGECMQELS GLLEMHNNAL PKRLI
Best Arabidopsis Sequence Match ( AT5G40990.1 )
(BLAST)
001: MENSQLVSIT FLAYTIIISI GSINCIDNNN LVTNQSALFV FGDSVFDAGN NNYIDTLSSV RSNYWPYGQT TFKSPTGRVS DGRLIPDFIA EYAWLPLIPP
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN
Arabidopsis Description
GLIP1GDSL esterase/lipase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLN0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.