Factsheet for VIT_09s0002g00530.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 2
mitochondrion 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g00510.t01	Wine grape	extracellular	75.0	69.92
VIT_09s0002g00500.t01	Wine grape	cytosol	58.43	69.07
VIT_09s0002g00520.t01	Wine grape	extracellular	57.85	62.38
VIT_09s0002g00540.t01	Wine grape	extracellular	70.06	61.17
KRH69020	Soybean	extracellular	56.69	55.71
KRG97291	Soybean	extracellular	16.86	55.24
KRG94370	Soybean	extracellular	57.85	54.52
VIT_09s0002g00490.t01	Wine grape	vacuole	58.72	53.58
KRG97292	Soybean	extracellular	55.81	52.46
VIT_09s0002g00550.t01	Wine grape	extracellular	54.94	51.92
KRH47690	Soybean	extracellular, vacuole	55.23	51.91
KRH07083	Soybean	extracellular	40.7	50.91
Solyc11g051060.1.1	Tomato	vacuole	52.62	50.28
KRH13793	Soybean	nucleus	53.78	50.14
KRH13794	Soybean	nucleus	53.78	50.14
VIT_09s0002g00570.t01	Wine grape	extracellular	53.49	49.6
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	52.91	49.59
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	52.62	49.45
Solyc11g021040.1.1	Tomato	extracellular	29.65	48.8
PGSC0003DMT400013272	Potato	extracellular, vacuole	52.03	48.77
KRH06260	Soybean	cytosol, peroxisome	38.37	48.53
PGSC0003DMT400080416	Potato	golgi, vacuole	50.87	48.34
Solyc01g109020.1.1	Tomato	extracellular	26.45	47.89
Solyc06g065010.2.1	Tomato	nucleus	49.71	47.24
PGSC0003DMT400074599	Potato	cytosol	45.35	47.13
Solyc06g064960.2.1	Tomato	extracellular	49.71	46.72
Solyc11g051100.1.1	Tomato	cytosol, extracellular	9.59	46.48
PGSC0003DMT400016123	Potato	cytosol	11.63	45.98
Solyc06g064980.2.1	Tomato	extracellular	51.16	45.95
VIT_11s0016g00430.t01	Wine grape	extracellular	51.74	45.52
Solyc06g064990.2.1	Tomato	extracellular	51.16	45.48
PGSC0003DMT400017106	Potato	extracellular	48.26	44.86
Solyc04g028470.1.1	Tomato	cytosol	41.28	44.38
Solyc06g064970.2.1	Tomato	extracellular, vacuole	40.99	39.39
Solyc11g051120.1.1	Tomato	cytosol	14.53	34.48
VIT_01s0011g04540.t01	Wine grape	extracellular	30.81	29.53

Protein Annotations

EntrezGene:100259961	wikigene:100259961	Gene3D:3.40.50.1110	MapMan:35.1	ProteinID:CBI35811	ProteinID:CBI35811.3
ncoils:Coil	UniProt:D7TZL5	EMBL:FN596494	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016298	GO:GO:0016787	GO:GO:0016788
InterPro:IPR036514	EntrezGene:LOC100259961	wikigene:LOC100259961	InterPro:Lipase_GDSL_AS	PFAM:PF00657	ScanProsite:PS01098
PANTHER:PTHR22835	PANTHER:PTHR22835:SF301	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	UniParc:UPI0001BE49CA
ArrayExpress:VIT_09s0002g00530	EnsemblPlantsGene:VIT_09s0002g00530	EnsemblPlants:VIT_09s0002g00530.t01	RefSeq:XP_002271769	RefSeq:XP_002271769.2	SEG:seg

Description

No Description!

Coordinates

chr9:+:378445..379996

Molecular Weight (calculated)

38356.9 Da

IEP (calculated)

8.501

GRAVY (calculated)

-0.337

Length

344 amino acids

Sequence
(BLAST)

001: MESSGISIQK HVAFFVFGDS LFDAGNNKYI NTTDQRANFW PYGETFFGHP TGRFSDGRLI PDFIAEYAKL PFLPPYLQPG SNQLTYGANF AFAGAGALDE
101: TNQGKVINLN TQLTYFKNME KLLRQKLGNE AAKKILLEAV YLISIGTNDY LSPYFTNSTV LQSYPQKLYR HMVIGNLTVV IEEIYEKGGR KLGVLSLGPL
201: GCIPAMKAIK KPGTGECIEE ASEQAKLHNK ALSKVLQKLE SKLKGFKYSM FDFYSTFEDR MENPSKYGFN EGKTACCGSG PYRALVSCGG KGTMKEYELC
301: SNVREYVFFD GGHPTDKANQ EMAKLMWSGT HNITGPYNLK ELFA

Best Arabidopsis Sequence Match ( AT5G40990.1 )
(BLAST)

001: MENSQLVSIT FLAYTIIISI GSINCIDNNN LVTNQSALFV FGDSVFDAGN NNYIDTLSSV RSNYWPYGQT TFKSPTGRVS DGRLIPDFIA EYAWLPLIPP
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN

Arabidopsis Description

GLIP1GDSL esterase/lipase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.