Factsheet for VIT_11s0016g00430.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37563	Soybean	vacuole	70.59	67.81
KRH12620	Soybean	vacuole	69.31	67.25
KRH12619	Soybean	endoplasmic reticulum, extracellular, vacuole	65.73	64.74
KRH37561	Soybean	cytosol	52.43	61.01
VIT_09s0002g00530.t01	Wine grape	cytosol	45.52	51.74
VIT_09s0002g00510.t01	Wine grape	extracellular	47.57	50.41
VIT_09s0002g00490.t01	Wine grape	vacuole	48.08	49.87
VIT_09s0002g00540.t01	Wine grape	extracellular	48.59	48.22
VIT_09s0002g00500.t01	Wine grape	cytosol	35.55	47.77
VIT_09s0002g00520.t01	Wine grape	extracellular	38.87	47.65
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	39.9	42.62
VIT_09s0002g00550.t01	Wine grape	extracellular	39.64	42.58
VIT_09s0002g00570.t01	Wine grape	extracellular	39.9	42.05
VIT_01s0011g04540.t01	Wine grape	extracellular	28.9	31.48

Protein Annotations

EntrezGene:100247462	wikigene:100247462	Gene3D:3.40.50.1110	MapMan:35.1	ProteinID:CBI27751	ProteinID:CBI27751.3
ncoils:Coil	UniProt:D7TC93	EMBL:FN595756	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	EntrezGene:LOC100247462	wikigene:LOC100247462	PFAM:PF00657
PANTHER:PTHR22835	PANTHER:PTHR22835:SF247	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00015C8F19	ArrayExpress:VIT_11s0016g00430	EnsemblPlantsGene:VIT_11s0016g00430	EnsemblPlants:VIT_11s0016g00430.t01	RefSeq:XP_002277382
RefSeq:XP_002277382.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:+:424169..426464

Molecular Weight (calculated)

43248.1 Da

IEP (calculated)

4.690

GRAVY (calculated)

-0.224

Length

391 amino acids

Sequence
(BLAST)

001: MASLISEFGY WVTSIAIISS VFCAGAWGQP SEKTSAFFIF GDSTVDPGNN NYINTIPENR ADYKPYGQNG FFDHPTGRFC EGRIIVDFIA EYANLPLIPP
101: FFQPSADFIN GVNFASGGAG ILSETNQGLV IDLQTQLKNF EEVQKSLTEK LGDEEAKELM SEAVYFISIG SNDYMGGYLG SPKMRELYHP EAYVGMVIGN
201: LTQAIQVLYE KGGRKFGFLS LSPLGCLPAL RALNPKASEG GCLEEACALA LAHNNALSAV LRSLEHTMKG FMYSKSNFYN WLNDRINNPS KYDFKDGVNA
301: CCGAGPYGGV FSCGGTKKVT EYQLCENPHE YIWWDSFHPT ERIHEQFAKA LWDGPPFSVG PYNLQELFWS KEKKRMTIAD IVDDPDNPIA G

Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)

001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP

Arabidopsis Description

GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.