Factsheet for VIT_09s0002g00490.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g049550.1.1	Tomato	extracellular	58.89	60.82
PGSC0003DMT400074252	Potato	extracellular	58.89	60.16
KRH06261	Soybean	extracellular, vacuole	59.15	59.31
KRH47692	Soybean	extracellular, vacuole	58.89	59.04
VIT_09s0002g00510.t01	Wine grape	extracellular	57.56	58.81
VIT_09s0002g00530.t01	Wine grape	cytosol	53.58	58.72
AT1G53920.1	Thale cress	cytosol	59.95	58.7
Bra030918.1-P	Field mustard	plastid	46.42	56.27
VIT_09s0002g00520.t01	Wine grape	extracellular	47.48	56.11
CDY25680	Canola	extracellular, plasma membrane	23.87	53.89
VIT_09s0002g00500.t01	Wine grape	cytosol	41.38	53.61
VIT_09s0002g00540.t01	Wine grape	extracellular	55.7	53.3
CDY02491	Canola	plastid	23.87	52.94
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	48.81	50.27
VIT_09s0002g00550.t01	Wine grape	extracellular	46.68	48.35
VIT_11s0016g00430.t01	Wine grape	extracellular	49.87	48.08
VIT_09s0002g00570.t01	Wine grape	extracellular	44.83	45.55
VIT_01s0011g04540.t01	Wine grape	extracellular	29.71	31.2

Protein Annotations

EntrezGene:100253135	wikigene:100253135	Gene3D:3.40.50.1110	MapMan:35.1	ProteinID:CCB59249	ProteinID:CCB59249.1
UniProt:F6HXP2	EMBL:FN596494	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:IPR036514	EntrezGene:LOC100253135	wikigene:LOC100253135	PFAM:PF00657	PANTHER:PTHR22835
PANTHER:PTHR22835:SF461	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI00015C9076
ArrayExpress:VIT_09s0002g00490	EnsemblPlantsGene:VIT_09s0002g00490	EnsemblPlants:VIT_09s0002g00490.t01	RefSeq:XP_002271631	RefSeq:XP_002271631.1	SEG:seg

Description

No Description!

Coordinates

chr9:+:364360..366498

Molecular Weight (calculated)

42699.7 Da

IEP (calculated)

9.605

GRAVY (calculated)

-0.094

Length

377 amino acids

Sequence
(BLAST)

001: MARLISSLSC ILILTILLFP TICLSKTQNP ESQAAEASAA LFIFGDSFFD SGNNNYINTT TLDQANFWPY GETYFKFPTG RFSDGRLISD FIAQYAKLPM
101: IPPFLQPGVH QFYYGVNFAS AGAGALVETF QGAVIDLKTQ LKYYNKVVIW LRHKLGNFEA KMRLSRAVYL FSIGSNDYMS PFLTNSTILD SYSESEYVGM
201: VIGNLTTVIK KIYSRGGRKF GFLNLPPLGC FPGLRVLKPD KNGSCLEKVS MLAKLHNRAL SKLLVKLENQ LLGFKYSYYD FNSNLKQRMN RPAKYGFKEG
301: KTACCGTGQF RGVFSCGGRR IVKEFQLCEN PSEYVFWDSF HLTEKLYKQL ADEMWSGSPY SDVVRPYSLK NLFFPRV

Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)

001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP

Arabidopsis Description

GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.