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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_01s0011g06410.t01
VIT_09s0002g00550.t01
VIT_09s0002g00570.t01
VIT_09s0002g00580.t01
VIT_13s0064g00520.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 VIT_01s0011g06410.t01 AT2G01950.1 19000166
AT1G54030.1 VIT_13s0064g00520.t01 AT1G52400.1 23155454
AT1G54030.1 VIT_09s0002g00550.t01 AT1G54000.1 23155454
AT1G54030.1 VIT_09s0002g00570.t01 AT1G54000.1 23155454
AT1G54030.1 VIT_09s0002g00580.t01 AT1G54000.1 23155454
AT1G54030.1 VIT_09s0002g00550.t01 AT1G54010.1 23155454
AT1G54030.1 VIT_09s0002g00570.t01 AT1G54010.1 23155454
AT1G54030.1 VIT_09s0002g00580.t01 AT1G54010.1 23155454
AT1G54030.1 VIT_09s0002g00550.t01 AT1G54020.2 23155454
AT1G54030.1 VIT_09s0002g00570.t01 AT1G54020.2 23155454
AT1G54030.1 VIT_09s0002g00580.t01 AT1G54020.2 23155454
AT1G54030.1 VIT_13s0064g00520.t01 AT3G09260.1 23155454
AT1G54030.1 VIT_09s0002g00550.t01 AT3G14210.1 23155454
AT1G54030.1 VIT_09s0002g00570.t01 AT3G14210.1 23155454
AT1G54030.1 VIT_09s0002g00580.t01 AT3G14210.1 23155454
AT1G54030.1 VIT_13s0064g00520.t01 AT3G21370.1 23155454
AT3G14220.1 VIT_01s0011g06410.t01 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_09s0002g00550.t01 Wine grape extracellular 65.85 66.21
VIT_09s0002g00570.t01 Wine grape extracellular 66.39 65.5
VIT_09s0002g00530.t01 Wine grape cytosol 49.45 52.62
VIT_09s0002g00510.t01 Wine grape extracellular 51.91 51.49
VIT_09s0002g00520.t01 Wine grape extracellular 43.44 49.84
PGSC0003DMT400080416 Potato golgi, vacuole 49.18 49.72
Solyc06g065010.2.1 Tomato nucleus 49.18 49.72
VIT_09s0002g00540.t01 Wine grape extracellular 53.01 49.24
VIT_09s0002g00500.t01 Wine grape cytosol 39.07 49.14
VIT_09s0002g00490.t01 Wine grape vacuole 50.27 48.81
Solyc11g051060.1.1 Tomato vacuole 46.45 47.22
Solyc01g109020.1.1 Tomato extracellular 24.32 46.84
PGSC0003DMT400016126 Potato plasma membrane, vacuole 46.45 46.32
Solyc11g021040.1.1 Tomato extracellular 26.23 45.93
Solyc06g064960.2.1 Tomato extracellular 45.9 45.9
PGSC0003DMT400013272 Potato extracellular, vacuole 45.9 45.78
Solyc06g064980.2.1 Tomato extracellular 46.99 44.91
Solyc11g051100.1.1 Tomato cytosol, extracellular 8.47 43.66
PGSC0003DMT400074599 Potato cytosol 38.52 42.6
Solyc06g064990.2.1 Tomato extracellular 44.54 42.12
PGSC0003DMT400017106 Potato extracellular 41.8 41.35
PGSC0003DMT400016123 Potato cytosol 9.56 40.23
VIT_11s0016g00430.t01 Wine grape extracellular 42.62 39.9
Solyc04g028470.1.1 Tomato cytosol 34.43 39.38
Solyc06g064970.2.1 Tomato extracellular, vacuole 38.25 39.11
CDY54192 Canola extracellular 12.3 33.58
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 34.43 31.98
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 33.88 31.88
Solyc11g051120.1.1 Tomato cytosol 12.57 31.72
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 31.15 31.58
CDY61480 Canola extracellular, vacuole 33.33 30.96
Bra030911.1-P Field mustard extracellular, vacuole 33.33 30.89
CDY54197 Canola extracellular, vacuole 33.33 30.89
AT1G54010.1 Thale cress extracellular 32.24 30.57
CDY30675 Canola endoplasmic reticulum, vacuole 31.97 30.39
Bra030915.1-P Field mustard extracellular 31.97 30.31
CDY08211 Canola endoplasmic reticulum, vacuole 31.69 30.13
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 31.69 30.13
CDY33240 Canola vacuole 29.51 30.08
CDY08214 Canola cytosol 22.68 30.07
AT3G14220.1 Thale cress vacuole 29.78 30.03
CDY30680 Canola mitochondrion 33.06 29.95
VIT_01s0011g04540.t01 Wine grape extracellular 29.23 29.8
CDY54591 Canola extracellular 31.42 29.72
CDY39106 Canola vacuole 28.96 29.53
Bra021542.1-P Field mustard vacuole 28.96 29.53
AT3G14210.1 Thale cress extracellular, golgi 31.15 29.08
AT1G54020.2 Thale cress endoplasmic reticulum 29.51 29.03
CDX97555 Canola extracellular 30.6 29.02
Bra027359.1-P Field mustard extracellular 29.78 28.99
Bra014372.1-P Field mustard extracellular 30.33 28.91
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 30.33 28.91
CDX98428 Canola extracellular, plasma membrane, vacuole 30.6 28.87
CDX97556 Canola extracellular 30.6 28.87
Bra027358.1-P Field mustard extracellular 30.6 28.87
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 32.79 28.78
CDY54588 Canola extracellular 30.33 28.76
CDY36628 Canola cytosol 30.05 28.72
Bra037957.1-P Field mustard extracellular 30.05 28.72
CDY54196 Canola extracellular 30.33 28.53
CDY51412 Canola cytosol 29.78 28.46
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 29.78 28.46
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 30.05 28.13
CDY36623 Canola endoplasmic reticulum 28.96 27.68
Bra030913.1-P Field mustard cytosol 20.77 27.14
CDY54194 Canola cytosol 20.77 27.14
CDY30676 Canola cytosol 18.58 26.77
CDY51410 Canola mitochondrion, plastid 9.56 25.0
Bra030912.1-P Field mustard extracellular 30.33 24.94
CDY36625 Canola extracellular 8.74 23.53
CDY54198 Canola cytosol 6.83 18.8
Protein Annotations
EntrezGene:100259984wikigene:100259984Gene3D:3.40.50.1110MapMan:35.1EMBL:AM439509ProteinID:CAN69490
ProteinID:CAN69490.1ProteinID:CBI35814ProteinID:CBI35814.3UniProt:D7TZL8EMBL:FN596494InterPro:GDSL
GO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788InterPro:IPR036514EntrezGene:LOC100259984
wikigene:LOC100259984PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF301InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
SignalP:SignalP-noTMTIGR:TC63650UniParc:UPI0001983EE7ArrayExpress:VIT_09s0002g00580EnsemblPlantsGene:VIT_09s0002g00580EnsemblPlants:VIT_09s0002g00580.t01
unigene:Vvi.1890RefSeq:XP_002268194RefSeq:XP_002268194.1:::
Description
No Description!
Coordinates
chr9:+:402340..404568
Molecular Weight (calculated)
40535.9 Da
IEP (calculated)
8.954
GRAVY (calculated)
-0.227
Length
366 amino acids
Sequence
(BLAST)
001: MASLSFHFCV LMVMFAGLIS PPICHARFQE PKKHVPLFIL GDSLFDPGNN LYLNTTPESS AFWPYGETFF KRATGRFSDG RLVPDFIAEY MNLPMIPPYL
101: QPGPQRFIDG SNFASAGAGV LPETNFEVIS LPQQLMYFKG MVKVLKHQLD DAEAKKLLKR AVYLFSIGGN DYLHFYDENT NASQSEKREY VGIIIGNLTI
201: ALKEIYGLGG RKIAFQNAGL LGCLPSSRSG TKNGACAEKP SALARLHNMA LAKALKELES SLPGFKYAIF DYYKAISQRT DNPSKYGFKE AKTACCGSGP
301: YRASNCGGER GRKKFELCRI PGDYLWFDGG HGTERANRQL SELLWGGGPS STAPRNLKQL VELEIM
Best Arabidopsis Sequence Match ( AT1G53940.2 )
(BLAST)
001: MENSRSTLII FFAYTTIILI GSINCRDNNN NNLVTNQSAL FVFGDSVFDA GNNNYIDTLP SFRSNYWPYG QTTFKFPTGR VSDGRTIPDF IAEYAWLPLI
101: PAYLQPSNGK NQFPYGVSFA SAGAGALVGT FPGMVINLKS QLNNFKKVEK LLRSTLGEAQ GKMVISRAVY LFHIGVNDYQ YPFSTNSSIF QSSPQEIYVD
201: FVVGNTTAVI KEVYKIGGRK FGFLNMGAYD CAPASLIIDQ TKIGTCFKPV TELINLHNEK LESGLRRLER ELSGFKYALH DYHTSLSVRM NNPSKYGFKE
301: GKMACCGTGP LRGINTCGGR MGVSQSYELC EKVTDYLFFD HFHLTEKAHQ QIAELIWSGP TNVTKPYNLQ ALFELN
Arabidopsis Description
GLIP2GDSL esterase/lipase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.