CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54198	Canola	cytosol	51.43	54.14
Bra037957.1-P	Field mustard	extracellular	98.57	36.03
CDY30676	Canola	cytosol	64.29	35.43
CDY54194	Canola	cytosol	70.71	35.36
CDY36628	Canola	cytosol	95.71	34.99
CDY51412	Canola	cytosol	85.71	31.33
CDY36623	Canola	endoplasmic reticulum	81.43	29.77
PGSC0003DMT400016123	Potato	cytosol	15.71	25.29
AT1G54020.2	Thale cress	endoplasmic reticulum	66.43	25.0
Solyc11g051100.1.1	Tomato	cytosol, extracellular	12.14	23.94
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	65.0	23.7
CDY36625	Canola	extracellular	22.86	23.53
CDY54591	Canola	extracellular	64.29	23.26
CDY54588	Canola	extracellular	62.86	22.8
CDY54196	Canola	extracellular	62.14	22.36
CDY08211	Canola	endoplasmic reticulum, vacuole	58.57	21.3
CDY30675	Canola	endoplasmic reticulum, vacuole	58.57	21.3
CDX98428	Canola	extracellular, plasma membrane, vacuole	57.86	20.88
CDX97556	Canola	extracellular	57.86	20.88
CDX97555	Canola	extracellular	55.0	19.95
CDY08214	Canola	cytosol	30.0	15.22
CDY33240	Canola	vacuole	36.43	14.21
CDY39106	Canola	vacuole	36.43	14.21
CDY69407	Canola	extracellular	25.0	13.94
CDY61480	Canola	extracellular, vacuole	32.14	11.42
CDY54197	Canola	extracellular, vacuole	32.14	11.39
CDY69208	Canola	mitochondrion	25.0	11.22
KRH06260	Soybean	cytosol, peroxisome	20.71	10.66
Solyc11g051060.1.1	Tomato	vacuole	27.14	10.56
CDY30680	Canola	mitochondrion	30.0	10.4
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	26.43	10.08
CDY02490	Canola	extracellular, vacuole	26.43	9.97
CDY30674	Canola	extracellular, vacuole	26.43	9.95
CDY36619	Canola	endoplasmic reticulum, plasma membrane	25.71	9.7
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	25.0	9.56
CDY36617	Canola	plasma membrane	23.57	9.54
PGSC0003DMT400017106	Potato	extracellular	25.0	9.46
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	24.29	9.42
Solyc06g064980.2.1	Tomato	extracellular	25.71	9.4
Solyc06g065010.2.1	Tomato	nucleus	24.29	9.39
KRH47690	Soybean	extracellular, vacuole	24.29	9.29
CDX98432	Canola	extracellular	24.29	9.12
CDX97557	Canola	extracellular	24.29	9.12
Solyc06g064990.2.1	Tomato	extracellular	25.0	9.04
Solyc06g064960.2.1	Tomato	extracellular	23.57	9.02
KRH13793	Soybean	nucleus	23.57	8.94
KRH13794	Soybean	nucleus	23.57	8.94
VIT_09s0002g00570.t01	Wine grape	extracellular	23.57	8.89
CDX98433	Canola	extracellular, vacuole	23.57	8.82
VIT_09s0002g00550.t01	Wine grape	extracellular	22.86	8.79
CDY24064	Canola	plasma membrane	23.57	8.78
PGSC0003DMT400080416	Potato	golgi, vacuole	22.14	8.56
CDX97558	Canola	extracellular	22.86	8.56
PGSC0003DMT400013272	Potato	extracellular, vacuole	21.43	8.17
KRH69020	Soybean	extracellular	20.0	8.0
Solyc04g028470.1.1	Tomato	cytosol	17.86	7.81
KRG94370	Soybean	extracellular	20.0	7.67
PGSC0003DMT400074599	Potato	cytosol	17.14	7.25
KRG97292	Soybean	extracellular	17.86	6.83
KRH07083	Soybean	extracellular	12.86	6.55
CDX75755	Canola	plastid	13.57	4.43
KRG97291	Soybean	extracellular	2.14	2.86
Solyc06g064970.2.1	Tomato	extracellular, vacuole	7.14	2.79
CDY71922	Canola	extracellular, plasma membrane	2.86	1.8
CDY54192	Canola	extracellular	1.43	1.49
CDY25680	Canola	extracellular, plasma membrane	1.43	1.2
CDY02491	Canola	plastid	1.43	1.18
Solyc11g051120.1.1	Tomato	cytosol	0.71	0.69
Solyc01g109020.1.1	Tomato	extracellular	0.0	0.0
Solyc11g021040.1.1	Tomato	extracellular	0.0	0.0
CDY09515	Canola	endoplasmic reticulum, extracellular, golgi	0.0	0.0

Protein Annotations

EnsemblPlants:CDY51410	EnsemblPlantsGene:GSBRNA2T00003343001	PANTHER:PTHR22835	PANTHER:PTHR22835:SF301	ProteinID:CDY51410	ProteinID:CDY51410.1
UniParc:UPI0004EEF781	UniProt:A0A078IK33	MapMan:35.1	:	:	:

Description

BnaA06g01410DBnaA06g01410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK33]

Coordinates

chrLK032992:+:63569..64356

Molecular Weight (calculated)

16239.3 Da

IEP (calculated)

8.631

GRAVY (calculated)

-0.366

Length

140 amino acids

Sequence
(BLAST)

001: MLNDLARARS GFQFTVFDFY NVILRRTQRN MNFRYSFTNV SCCGIGSHNA FGCGRPNVHS KLCEYQRSYL FFDGRHNSEK AQEQFAHLLF GANPNVIQPM
101: NIRELITYPV NTNMSEFWKE PVGRNLLLVH EYDVNASVST

Best Arabidopsis Sequence Match ( AT1G54020.1 )
(BLAST)

001: MGIPHDLPPA LKPGTDVSRG ASFAVGSASI LGSPKDSLAL NQQVRKFNQM ISNWKVDYIQ KSVFMISIGM EDYYNFTKNN PNAEVSAQQA FVTSVTNRFK
101: SDINLLYSSG ASKFVVHLLA PLGCLPIARQ EFKTGNNCYE KLNDLAKQHN AKIGPILNEM AETKPDFQFT VFDFYNVILR RTQRNMNYRF SVTNISCCGV
201: GTHYAYGCGL PNVHSKLCEY QRSYLYFDAR HNTEKAQEAF AHLIFGADPN VIQPMNVREL MVYPVNEPMR EFWEDPMDEK LSLVQY

Arabidopsis Description

GDSL esterase/lipase At1g54020 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5N8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.