CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98432	Canola	extracellular	53.85	61.93
CDX97557	Canola	extracellular	53.61	61.66
AT3G14225.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	50.58	57.56
CDY36619	Canola	endoplasmic reticulum, plasma membrane	40.33	46.63
CDY24064	Canola	plasma membrane	40.33	46.01
CDY02490	Canola	extracellular, vacuole	39.16	45.28
CDY36617	Canola	plasma membrane	35.9	44.51
CDY30674	Canola	extracellular, vacuole	38.46	44.35
CDY71922	Canola	extracellular, plasma membrane	21.21	40.99
CDX97558	Canola	extracellular	34.97	40.11
CDX98433	Canola	extracellular, vacuole	34.73	39.84
Solyc11g051100.1.1	Tomato	cytosol, extracellular	6.53	39.44
CDY69208	Canola	mitochondrion	28.21	38.78
CDY69407	Canola	extracellular	21.45	36.65
CDY25680	Canola	extracellular, plasma membrane	13.52	34.73
Solyc01g109020.1.1	Tomato	extracellular	15.15	34.21
CDY02491	Canola	plastid	13.52	34.12
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	28.67	33.52
Solyc11g051060.1.1	Tomato	vacuole	27.97	33.33
Solyc11g021040.1.1	Tomato	extracellular	16.08	33.01
Solyc06g064980.2.1	Tomato	extracellular	27.97	31.33
PGSC0003DMT400080416	Potato	golgi, vacuole	26.34	31.22
Solyc06g065010.2.1	Tomato	nucleus	26.34	31.22
PGSC0003DMT400013272	Potato	extracellular, vacuole	26.34	30.79
Solyc06g064990.2.1	Tomato	extracellular	27.27	30.23
Solyc06g064960.2.1	Tomato	extracellular	25.41	29.78
PGSC0003DMT400074599	Potato	cytosol	22.61	29.31
CDY09515	Canola	endoplasmic reticulum, extracellular, golgi	8.62	28.24
Solyc06g064970.2.1	Tomato	extracellular, vacuole	23.08	27.65
PGSC0003DMT400017106	Potato	extracellular	23.78	27.57
Solyc04g028470.1.1	Tomato	cytosol	20.51	27.5
CDY54192	Canola	extracellular	8.39	26.87
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	18.41	21.88
PGSC0003DMT400016123	Potato	cytosol	4.43	21.84
CDY39106	Canola	vacuole	18.18	21.73
CDY33240	Canola	vacuole	18.18	21.73
CDY61480	Canola	extracellular, vacuole	19.35	21.07
CDY54197	Canola	extracellular, vacuole	19.35	21.01
CDY30675	Canola	endoplasmic reticulum, vacuole	18.65	20.78
CDY08211	Canola	endoplasmic reticulum, vacuole	18.65	20.78
CDY54591	Canola	extracellular	18.65	20.67
CDX97555	Canola	extracellular	18.41	20.47
CDY30680	Canola	mitochondrion	18.88	20.05
CDX97556	Canola	extracellular	17.95	19.85
CDX98428	Canola	extracellular, plasma membrane, vacuole	17.95	19.85
CDY51412	Canola	cytosol	17.72	19.84
CDY36628	Canola	cytosol	17.72	19.84
CDY36623	Canola	endoplasmic reticulum	17.72	19.84
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	17.25	19.27
CDY36625	Canola	extracellular	6.06	19.12
Solyc11g051120.1.1	Tomato	cytosol	6.29	18.62
CDY54588	Canola	extracellular	16.55	18.39
CDY54196	Canola	extracellular	16.55	18.25
CDY08214	Canola	cytosol	11.42	17.75
CDY30676	Canola	cytosol	9.32	15.75
CDY54194	Canola	cytosol	10.26	15.71
CDY51410	Canola	mitochondrion, plastid	4.43	13.57
CDY54198	Canola	cytosol	2.33	7.52

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	GO:A0A078CFW2	EnsemblPlants:CDX75755	ProteinID:CDX75755	ProteinID:CDX75755.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016298
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00123685001	InterPro:IPR036514	InterPro:Lipase_GDSL_AS	ScanProsite:PS01098	PANTHER:PTHR22835
PANTHER:PTHR22835:SF461	InterPro:SGNH_hydro_sf	UniParc:UPI0004EDDDBE	:	:	:

Description

BnaC03g38380D

Coordinates

chrLK031805:-:357172..359851

Molecular Weight (calculated)

48066.1 Da

IEP (calculated)

9.906

GRAVY (calculated)

-0.449

Length

429 amino acids

Sequence
(BLAST)

001: MSRHVSITPF SVTRSDAGNR GVTSSISCKT VTNQAALFVF GDSLFEAGNN NYVDSLPGFR SNCWPNGKST FQFSTGRVSD GRIMIDFIAE HAWLPLLPPN
101: LQPGYSKSQL TYGLNFATTA VGVLAGTFPG VSKYLGTQQN RFKNATQVLR SKLGDGETRR VILKAVYLFH IGANDYQYIS SQTRHLLVPR PKRGSWTSLS
201: VTQRTSSSRV NIILKKMKFG FLSLDCQIQL TQQFTDGLPV TLSTFEVDKN YEEVVPKKKG RTLGIGSVND VPRATSSYGQ RRDDEVTELR NELAATKSRM
301: GGVEGFLDVI AATNPEWESM LRNMRQQHPI RGESSDTHNE ADINEYFTRK YFLFRKVLRR LERQLLGFKY SLHDFHISLL QRINDPSRYG FKQGKMACCG
401: SGPLRGVDTC GFRNGPSQGY ELCENSGDY

Best Arabidopsis Sequence Match ( AT1G53940.1 )
(BLAST)

001: MENSRSTLII FFAYTTIILI GSINCRDNNN NNLVTNQSAL FVFGDSVFDA GNNNYIDTLP SFRSNYWPYG QTTFKFPTGR VSDGRTIPDF IAEYAWLPLI
101: PAYLQPSNGK NQFPYGVSFA SAGAGALVGT FPGMVINLKS QLNNFKKVEK LLRSTLGEAQ GKMVISRAVY LFHIGVNDYQ YPFSTNSSIF QSSPQEIYVD
201: FVVGNTTAVI KEVYKIGGRK FGFLNMGAYD CAPASLIIDQ TKIGTCFKPV TELINLHNEK LESGLRRLER ELSGFKYALH DYHTSLSVRM NNPSKYGNKT
301: FCNFM

Arabidopsis Description

GLIP2GDSL esterase/lipase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF0]
SUBAcon: [plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.