CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02490	Canola	extracellular, vacuole	80.86	80.86
CDY69407	Canola	extracellular	54.45	80.48
AT1G53990.1	Thale cress	extracellular, plasma membrane	77.9	78.75
CDY30674	Canola	extracellular, vacuole	77.9	77.69
CDY69208	Canola	mitochondrion	64.42	76.6
CDY24064	Canola	plasma membrane	77.09	76.06
CDY36617	Canola	plasma membrane	69.54	74.57
CDX97557	Canola	extracellular	64.15	63.81
CDX98432	Canola	extracellular	64.15	63.81
CDX98433	Canola	extracellular, vacuole	61.99	61.5
CDX97558	Canola	extracellular	61.19	60.7
CDY71922	Canola	extracellular, plasma membrane	34.5	57.66
Solyc01g109020.1.1	Tomato	extracellular	25.07	48.95
Solyc11g021040.1.1	Tomato	extracellular	27.49	48.8
PGSC0003DMT400080416	Potato	golgi, vacuole	46.36	47.51
CDY25680	Canola	extracellular, plasma membrane	21.29	47.31
Solyc11g051060.1.1	Tomato	vacuole	45.82	47.22
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	46.36	46.87
CDY02491	Canola	plastid	21.29	46.47
Solyc06g065010.2.1	Tomato	nucleus	45.28	46.41
PGSC0003DMT400016123	Potato	cytosol	10.51	44.83
PGSC0003DMT400013272	Potato	extracellular, vacuole	43.4	43.87
Solyc06g064990.2.1	Tomato	extracellular	45.55	43.67
Solyc06g064960.2.1	Tomato	extracellular	42.86	43.44
Solyc06g064980.2.1	Tomato	extracellular	43.4	42.04
PGSC0003DMT400017106	Potato	extracellular	40.7	40.81
CDX75755	Canola	plastid	46.63	40.33
PGSC0003DMT400074599	Potato	cytosol	35.58	39.88
Solyc11g051100.1.1	Tomato	cytosol, extracellular	7.55	39.44
Solyc04g028470.1.1	Tomato	cytosol	32.88	38.12
Solyc06g064970.2.1	Tomato	extracellular, vacuole	34.77	36.03
CDY09515	Canola	endoplasmic reticulum, extracellular, golgi	12.13	34.35
CDY54192	Canola	extracellular	12.13	33.58
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	30.19	31.02
CDY54197	Canola	extracellular, vacuole	32.88	30.89
CDY61480	Canola	extracellular, vacuole	32.61	30.71
CDY33240	Canola	vacuole	28.3	29.25
CDY30680	Canola	mitochondrion	31.54	28.96
CDY30675	Canola	endoplasmic reticulum, vacuole	29.38	28.31
CDY36628	Canola	cytosol	29.11	28.2
CDY39106	Canola	vacuole	27.22	28.13
CDY08211	Canola	endoplasmic reticulum, vacuole	29.11	28.05
CDY54591	Canola	extracellular	29.11	27.91
CDY08214	Canola	cytosol	20.49	27.54
CDX97555	Canola	extracellular	28.03	26.94
CDY51412	Canola	cytosol	27.76	26.89
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	27.76	26.82
CDY54588	Canola	extracellular	27.76	26.68
CDY54196	Canola	extracellular	27.76	26.48
CDY36623	Canola	endoplasmic reticulum	27.22	26.37
CDX98428	Canola	extracellular, plasma membrane, vacuole	27.22	26.03
CDX97556	Canola	extracellular	27.22	26.03
CDY51410	Canola	mitochondrion, plastid	9.7	25.71
Solyc11g051120.1.1	Tomato	cytosol	9.97	25.52
CDY36625	Canola	extracellular	8.89	24.26
CDY30676	Canola	cytosol	15.9	23.23
CDY54194	Canola	cytosol	17.52	23.21
CDY54198	Canola	cytosol	8.09	22.56

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	GO:A0A078HGU3	UniProt:A0A078HGU3	EnsemblPlants:CDY36619	ProteinID:CDY36619
ProteinID:CDY36619.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016298	GO:GO:0016787	GO:GO:0016788	EnsemblPlantsGene:GSBRNA2T00062333001	InterPro:IPR036514
InterPro:Lipase_GDSL_AS	PFAM:PF00657	ScanProsite:PS01098	PANTHER:PTHR22835	PANTHER:PTHR22835:SF301	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI0004EDD83E	SEG:seg	:

Description

BnaC06g06720DBnaC06g06720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGU3]

Coordinates

chrLK032379:+:196773..198907

Molecular Weight (calculated)

41217.9 Da

IEP (calculated)

8.260

GRAVY (calculated)

-0.138

Length

371 amino acids

Sequence
(BLAST)

001: MASSRSISII FFIYTIILSS SSINCKGNNN NLVTNQTALF VFGDSLFDAG NNNYIDTTFR SNFWPYGQTT FKFPTGRISD GRLIPDFIAE NAWLPLIPPN
101: LQPSNSNNQF TYGVSFASAG AGSLVETFPG TVINLGTQLN SFMNVERMLR SELGNAEVKK IFSRAVYLFH IGGNDLFYPF SANSSLFQSN SIEKFVDFVI
201: GNTTSVIKQV YKMGGRKFGF LNVGAYDCAP GASILDRTNI GSCFKPVTEL VDLHNKKFAD ALSRLQRELS GFRYALHDYH TSLLERINNP SIYGFKEGKK
301: GCCGSGPLRG INTCGNRMGQ SFELCENVTD YLFFDSTHLT EKAHRQIAEL IWNGPPNVTG PYNLKALFEF N

Best Arabidopsis Sequence Match ( AT1G53990.1 )
(BLAST)

001: MVRLVLIIFF VYTIILSIGS INCIDNNNLV TNQAALFVFG DSLFDAGNNN YINTVSSFRS NIWPYGQTNF KFPTGRLSDG PEKAWLPSIP PNLQPNNGNN
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT

Arabidopsis Description

GLIP3GDSL esterase/lipase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.