Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G54010.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT1G54010.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54196 | Canola | extracellular | 96.89 | 96.14 |
| CDY54192 | Canola | extracellular | 28.76 | 82.84 |
| CDY54591 | Canola | extracellular | 82.38 | 82.17 |
| Bra030912.1-P | Field mustard | extracellular | 94.3 | 81.8 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 81.35 | 81.77 |
| CDY30676 | Canola | cytosol | 51.81 | 78.74 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 76.94 | 77.14 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 76.68 | 76.88 |
| AT1G54010.1 | Thale cress | extracellular | 75.91 | 75.91 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 74.87 | 73.91 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 66.06 | 65.72 |
| CDY51412 | Canola | cytosol | 64.77 | 65.27 |
| CDY36623 | Canola | endoplasmic reticulum | 64.25 | 64.75 |
| CDX97556 | Canola | extracellular | 64.77 | 64.43 |
| CDX97555 | Canola | extracellular | 63.21 | 63.21 |
| CDY36628 | Canola | cytosol | 62.44 | 62.92 |
| CDY51410 | Canola | mitochondrion, plastid | 22.8 | 62.86 |
| CDY54194 | Canola | cytosol | 41.71 | 57.5 |
| CDY54198 | Canola | cytosol | 17.36 | 50.38 |
| CDY39106 | Canola | vacuole | 42.23 | 45.4 |
| CDY33240 | Canola | vacuole | 41.45 | 44.57 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 33.68 | 36.01 |
| CDY61480 | Canola | extracellular, vacuole | 35.75 | 35.03 |
| CDY54197 | Canola | extracellular, vacuole | 35.75 | 34.94 |
| CDY30680 | Canola | mitochondrion | 34.97 | 33.42 |
| CDY08214 | Canola | cytosol | 22.54 | 31.52 |
| KRG97291 | Soybean | extracellular | 8.55 | 31.43 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 28.76 | 30.33 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 28.5 | 29.65 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 27.46 | 29.12 |
| KRH47690 | Soybean | extracellular, vacuole | 26.94 | 28.42 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 26.94 | 28.34 |
| KRH69020 | Soybean | extracellular | 25.65 | 28.29 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 9.59 | 28.24 |
| CDX97557 | Canola | extracellular | 27.2 | 28.15 |
| CDY25680 | Canola | extracellular, plasma membrane | 12.18 | 28.14 |
| KRH07083 | Soybean | extracellular | 19.95 | 28.0 |
| KRH13794 | Soybean | nucleus | 26.68 | 27.91 |
| CDX98432 | Canola | extracellular | 26.94 | 27.88 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 26.68 | 27.76 |
| CDY02491 | Canola | plastid | 12.18 | 27.65 |
| Solyc11g051060.1.1 | Tomato | vacuole | 25.65 | 27.5 |
| KRH13793 | Soybean | nucleus | 26.17 | 27.37 |
| CDX97558 | Canola | extracellular | 26.42 | 27.27 |
| CDX98433 | Canola | extracellular, vacuole | 26.42 | 27.27 |
| CDY36625 | Canola | extracellular | 9.33 | 26.47 |
| CDY02490 | Canola | extracellular, vacuole | 25.39 | 26.42 |
| KRG94370 | Soybean | extracellular | 24.87 | 26.3 |
| CDY24064 | Canola | plasma membrane | 25.39 | 26.06 |
| PGSC0003DMT400017106 | Potato | extracellular | 24.61 | 25.68 |
| CDY30674 | Canola | extracellular, vacuole | 24.61 | 25.54 |
| CDY36617 | Canola | plasma membrane | 22.8 | 25.43 |
| Solyc06g065010.2.1 | Tomato | nucleus | 23.83 | 25.41 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 4.66 | 25.35 |
| Solyc06g064960.2.1 | Tomato | extracellular | 23.83 | 25.14 |
| KRG97292 | Soybean | extracellular | 23.58 | 24.86 |
| Solyc06g064980.2.1 | Tomato | extracellular | 24.61 | 24.8 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 23.58 | 24.8 |
| CDY71922 | Canola | extracellular, plasma membrane | 14.25 | 24.77 |
| PGSC0003DMT400074599 | Potato | cytosol | 20.98 | 24.47 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 22.8 | 24.31 |
| KRH06260 | Soybean | cytosol, peroxisome | 17.1 | 24.26 |
| PGSC0003DMT400016123 | Potato | cytosol | 5.44 | 24.14 |
| Solyc04g028470.1.1 | Tomato | cytosol | 19.69 | 23.75 |
| CDY69208 | Canola | mitochondrion | 18.91 | 23.4 |
| Solyc06g064990.2.1 | Tomato | extracellular | 23.32 | 23.26 |
| CDY69407 | Canola | extracellular | 15.03 | 23.11 |
| Solyc11g051120.1.1 | Tomato | cytosol | 8.55 | 22.76 |
| Solyc01g109020.1.1 | Tomato | extracellular | 11.14 | 22.63 |
| Solyc11g021040.1.1 | Tomato | extracellular | 11.66 | 21.53 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 19.17 | 20.67 |
| CDX75755 | Canola | plastid | 18.39 | 16.55 |
Protein Annotations
| EnsemblPlants:CDY54588 | EnsemblPlantsGene:GSBRNA2T00014325001 | Gene3D:3.40.50.1110 | GO:A0A078IX31 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF485 | PFAM:PF00657 | ProteinID:CDY54588 | ProteinID:CDY54588.1 | SignalP:SignalP-noTM | SUPFAM:SSF52266 |
| TMHMM:TMhelix | UniParc:UPI0004EDE64B | UniProt:A0A078IX31 | MapMan:35.1 | : | : |
Description
BnaCnng27390DBnaCnng27390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IX31]
Coordinates
chrLK033332:+:20645..23497
Molecular Weight (calculated)
42703.1 Da
IEP (calculated)
6.982
GRAVY (calculated)
-0.073
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKCTLASV LGLLLVFTLF QNPLTVCGQS IPAVALFTFG DSNFDAGNKQ TLTQVNVAQG FWPYGKSRDD PNGKFSDGFI APDFVATFME IPIPIPAALK
101: PGVNVSRGAS FAVADATLLG APVQSLTLYQ QIAKFNEMKA ANWNDDFIKQ SLFMIYIGAN DYFNFTKNNP NADASAQQAF VISVTNQLKN EISFLYASGA
201: RKLMIQTLAP LGCLPIVRQD YRTGMEQCYE PLNNLALQHN EKIGPMLNEM ALNAPDFQFT VFDFYNVILR RITPQRSLGY RFLRTNVSCC GIGTHTAYGC
301: GLPNVHSKLC SYQRSYLFFD GRHNTEKAQE SFGHLMFGAD PNVIQPMNIR ELVTYPVGEP MREAWLPTTS ATVQASDSST SNRELY
101: PGVNVSRGAS FAVADATLLG APVQSLTLYQ QIAKFNEMKA ANWNDDFIKQ SLFMIYIGAN DYFNFTKNNP NADASAQQAF VISVTNQLKN EISFLYASGA
201: RKLMIQTLAP LGCLPIVRQD YRTGMEQCYE PLNNLALQHN EKIGPMLNEM ALNAPDFQFT VFDFYNVILR RITPQRSLGY RFLRTNVSCC GIGTHTAYGC
301: GLPNVHSKLC SYQRSYLFFD GRHNTEKAQE SFGHLMFGAD PNVIQPMNIR ELVTYPVGEP MREAWLPTTS ATVQASDSST SNRELY
001: MMANNCNLVS VLCVILVLTL FHNPITVAGQ NSPVVALFTF GDSNFDAGNK QTLTKTLVAQ GFWPYGKSRD DPNGKFSDGL ITPDFLAKFM KIPLAIAPAL
101: QPNVNVSRGA SFAVEGATLL GAPVESMTLN QQVKKFNQMK AANWNDDFVA KSVFMIYIGA NDYLNFTKNN PTADASAQQA FVTSVTNKLK NDISALYSSG
201: ASKFVIQTLA PLGCLPIVRQ EYNTGMDQCY EKLNDLAKQH NEKIGPMLNE MARNSPASAP FQFTVFDFYN AVLTRTQRNQ NFRFFVTNAS CCGVGSHDAY
301: GCGLPNVHSK LCEYQRSFLF FDGRHNSEKA QEMFAHLLFG ADTNVVQPMN VRELTVYPVD EPMREFWVPP TPATVHASDS SSSTSRGYEY Y
101: QPNVNVSRGA SFAVEGATLL GAPVESMTLN QQVKKFNQMK AANWNDDFVA KSVFMIYIGA NDYLNFTKNN PTADASAQQA FVTSVTNKLK NDISALYSSG
201: ASKFVIQTLA PLGCLPIVRQ EYNTGMDQCY EKLNDLAKQH NEKIGPMLNE MARNSPASAP FQFTVFDFYN AVLTRTQRNQ NFRFFVTNAS CCGVGSHDAY
301: GCGLPNVHSK LCEYQRSFLF FDGRHNSEKA QEMFAHLLFG ADTNVVQPMN VRELTVYPVD EPMREFWVPP TPATVHASDS SSSTSRGYEY Y
Arabidopsis Description
GLL22GDSL esterase/lipase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q1H583]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.