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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • extracellular 7
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 5
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:endoplasmic reticulum
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG94370
KRG97291
KRG97292
KRH06260
KRH07083
KRH13793
KRH13794
KRH25456
KRH29658
KRH29659
KRH42483
KRH43441
KRH47690
KRH58580
KRH68153
KRH69020

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 KRH42483 AT2G01950.1 19000166
AT1G54010.1 KRH58580 AT2G01950.1 19000166
AT1G54030.1 KRH25456 AT1G52400.1 23155454
AT1G54030.1 KRH29658 AT1G52400.1 23155454
AT1G54030.1 KRH29659 AT1G52400.1 23155454
AT1G54030.1 KRH43441 AT1G52400.1 23155454
AT1G54030.1 KRG94370 AT1G54000.1 23155454
AT1G54030.1 KRG97291 AT1G54000.1 23155454
AT1G54030.1 KRG97292 AT1G54000.1 23155454
AT1G54030.1 KRH06260 AT1G54000.1 23155454
AT1G54030.1 KRH07083 AT1G54000.1 23155454
AT1G54030.1 KRH13793 AT1G54000.1 23155454
AT1G54030.1 KRH13794 AT1G54000.1 23155454
AT1G54030.1 KRH47690 AT1G54000.1 23155454
AT1G54030.1 KRH69020 AT1G54000.1 23155454
AT1G54030.1 KRG94370 AT1G54010.1 23155454
AT1G54030.1 KRG97291 AT1G54010.1 23155454
AT1G54030.1 KRG97292 AT1G54010.1 23155454
AT1G54030.1 KRH06260 AT1G54010.1 23155454
AT1G54030.1 KRH07083 AT1G54010.1 23155454
AT1G54030.1 KRH13793 AT1G54010.1 23155454
AT1G54030.1 KRH13794 AT1G54010.1 23155454
AT1G54030.1 KRH47690 AT1G54010.1 23155454
AT1G54030.1 KRH69020 AT1G54010.1 23155454
AT1G54030.1 KRG94370 AT1G54020.2 23155454
AT1G54030.1 KRG97291 AT1G54020.2 23155454
AT1G54030.1 KRG97292 AT1G54020.2 23155454
AT1G54030.1 KRH06260 AT1G54020.2 23155454
AT1G54030.1 KRH07083 AT1G54020.2 23155454
AT1G54030.1 KRH13793 AT1G54020.2 23155454
AT1G54030.1 KRH13794 AT1G54020.2 23155454
AT1G54030.1 KRH47690 AT1G54020.2 23155454
AT1G54030.1 KRH69020 AT1G54020.2 23155454
AT1G54030.1 KRH68153 AT1G58270.1 23155454
AT1G54030.1 KRH25456 AT3G09260.1 23155454
AT1G54030.1 KRH29658 AT3G09260.1 23155454
AT1G54030.1 KRH29659 AT3G09260.1 23155454
AT1G54030.1 KRH43441 AT3G09260.1 23155454
AT1G54030.1 KRG94370 AT3G14210.1 23155454
AT1G54030.1 KRG97291 AT3G14210.1 23155454
AT1G54030.1 KRG97292 AT3G14210.1 23155454
AT1G54030.1 KRH06260 AT3G14210.1 23155454
AT1G54030.1 KRH07083 AT3G14210.1 23155454
AT1G54030.1 KRH13793 AT3G14210.1 23155454
AT1G54030.1 KRH13794 AT3G14210.1 23155454
AT1G54030.1 KRH47690 AT3G14210.1 23155454
AT1G54030.1 KRH69020 AT3G14210.1 23155454
AT1G54030.1 KRH68153 AT3G20370.1 23155454
AT1G54030.1 KRH25456 AT3G21370.1 23155454
AT1G54030.1 KRH29658 AT3G21370.1 23155454
AT1G54030.1 KRH29659 AT3G21370.1 23155454
AT1G54030.1 KRH43441 AT3G21370.1 23155454
AT3G14220.1 KRH42483 AT2G01950.1 19000166
AT3G14220.1 KRH58580 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH13793 Soybean nucleus 97.83 97.83
KRG97291 Soybean extracellular 17.07 60.0
VIT_09s0002g00510.t01 Wine grape extracellular 57.18 57.18
KRH47690 Soybean extracellular, vacuole 56.64 57.1
KRH69020 Soybean extracellular 53.12 56.0
KRG97292 Soybean extracellular 55.28 55.74
KRG94370 Soybean extracellular 54.47 55.07
VIT_09s0002g00530.t01 Wine grape cytosol 50.14 53.78
VIT_09s0002g00520.t01 Wine grape extracellular 44.72 51.72
KRH07083 Soybean extracellular 38.48 51.64
KRH06260 Soybean cytosol, peroxisome 37.67 51.1
Solyc11g051060.1.1 Tomato vacuole 49.32 50.56
VIT_09s0002g00540.t01 Wine grape extracellular 53.12 49.75
PGSC0003DMT400016126 Potato plasma membrane, vacuole 49.32 49.59
VIT_09s0002g00500.t01 Wine grape cytosol 39.02 49.48
PGSC0003DMT400080416 Potato golgi, vacuole 48.24 49.17
Solyc01g109020.1.1 Tomato extracellular 25.2 48.95
Solyc11g021040.1.1 Tomato extracellular 27.64 48.8
KRH06261 Soybean extracellular, vacuole 49.59 48.67
Solyc06g065010.2.1 Tomato nucleus 47.7 48.62
KRH47692 Soybean extracellular, vacuole 49.32 48.4
Solyc06g064960.2.1 Tomato extracellular 46.88 47.27
PGSC0003DMT400013272 Potato extracellular, vacuole 46.88 47.14
Solyc06g064990.2.1 Tomato extracellular 49.32 47.03
Solyc11g051100.1.1 Tomato cytosol, extracellular 8.94 46.48
Solyc06g064980.2.1 Tomato extracellular 46.07 44.39
PGSC0003DMT400016123 Potato cytosol 10.3 43.68
PGSC0003DMT400017106 Potato extracellular 43.09 42.97
PGSC0003DMT400074599 Potato cytosol 37.94 42.3
Solyc04g028470.1.1 Tomato cytosol 36.04 41.56
KRH12620 Soybean vacuole 45.26 41.44
KRH12619 Soybean endoplasmic reticulum, extracellular, vacuole 43.9 40.81
KRH37563 Soybean vacuole 44.44 40.29
KRH37561 Soybean cytosol 36.04 39.58
Solyc06g064970.2.1 Tomato extracellular, vacuole 36.59 37.71
Solyc11g051120.1.1 Tomato cytosol 13.01 33.1
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 30.08 30.75
CDY61480 Canola extracellular, vacuole 32.79 30.71
CDY54197 Canola extracellular, vacuole 32.79 30.63
Bra030911.1-P Field mustard extracellular, vacuole 32.79 30.63
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 32.25 30.2
CDY54192 Canola extracellular 10.84 29.85
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 30.89 29.31
CDY30680 Canola mitochondrion 31.98 29.21
CDY08214 Canola cytosol 21.41 28.62
Bra030915.1-P Field mustard extracellular 29.81 28.5
CDY36628 Canola cytosol 29.54 28.46
Bra027359.1-P Field mustard extracellular 29.0 28.46
CDY08211 Canola endoplasmic reticulum, vacuole 29.54 28.31
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 29.54 28.31
CDY30675 Canola endoplasmic reticulum, vacuole 29.54 28.31
CDX97555 Canola extracellular 29.54 28.24
AT1G54020.2 Thale cress endoplasmic reticulum 28.46 28.23
Bra037957.1-P Field mustard extracellular 29.27 28.2
CDY54591 Canola extracellular 29.27 27.91
AT3G14210.1 Thale cress extracellular, golgi 29.54 27.81
AT1G54010.1 Thale cress extracellular 29.0 27.72
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 31.17 27.58
AT3G14220.1 Thale cress vacuole 27.1 27.55
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 29.0 27.37
CDY39106 Canola vacuole 26.56 27.3
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 28.18 27.08
Bra014372.1-P Field mustard extracellular 28.18 27.08
CDX98428 Canola extracellular, plasma membrane, vacuole 28.46 27.06
Bra021542.1-P Field mustard vacuole 26.29 27.02
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 27.91 26.89
CDY51412 Canola cytosol 27.91 26.89
CDY33240 Canola vacuole 26.02 26.74
CDY54588 Canola extracellular 27.91 26.68
CDX97556 Canola extracellular 27.91 26.55
Bra027358.1-P Field mustard extracellular 27.91 26.55
CDY54196 Canola extracellular 27.91 26.48
CDY30676 Canola cytosol 18.16 26.38
CDY36623 Canola endoplasmic reticulum 27.1 26.11
CDY36625 Canola extracellular 9.49 25.74
Bra030913.1-P Field mustard cytosol 19.24 25.36
CDY54194 Canola cytosol 19.24 25.36
CDY51410 Canola mitochondrion, plastid 8.94 23.57
Bra030912.1-P Field mustard extracellular 27.91 23.15
CDY54198 Canola cytosol 7.32 20.3
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EMBL:ACUP02009788InterPro:GDSLEnsemblPlantsGene:GLYMA_15G264300GO:GO:0003674
GO:GO:0003824GO:GO:0016787GO:GO:0016788UniProt:I1MJF0InterPro:IPR036514EnsemblPlants:KRH13794
ProteinID:KRH13794ProteinID:KRH13794.1PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF262InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266SignalP:SignalP-noTMUniParc:UPI000233BE7A::
Description
hypothetical protein
Coordinates
chr15:-:49856796..49861158
Molecular Weight (calculated)
40715.5 Da
IEP (calculated)
6.665
GRAVY (calculated)
-0.040
Length
369 amino acids
Sequence
(BLAST)
001: MAGSISLLGF ALVIFIQIMT QCHSSITTCL PEKHAALFIL GDSLFDNGNN NYINTTTSYQ ANYPPYGETF FKYPSGRFSD GRMIPDAVAE LAKLPILPPY
101: LHPGNVEYVY GVNFASGGAG ALRETSQGMV IDLKTQVSYL KNVKNLFSQR FGHAIAEEIL SKSVYLFNIG ANDYGSLLDP NSTSVLLPVD HQGFVDIVIG
201: NLTDAIKEIY NVGGKKFGFL NVPPIGCSPA VRILVNNGST CFEEFSAIAR LHNNALSKRL HELEKQLKGF KYSVMDFYSA FSQVFNNPTK YGFKVASVAC
301: CGSGPFRGVD SCGGNKGIKE YELCDNVNEH LFFDSHHLTD RASEYFAELI WNANRTVTSP YNLKQLFEL
Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)
001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP
Arabidopsis Description
GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.