CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12620	Soybean	vacuole	83.63	82.38
KRH37563	Soybean	vacuole	81.11	79.12
KRH37561	Soybean	cytosol	57.68	68.15
VIT_11s0016g00430.t01	Wine grape	extracellular	64.74	65.73
KRH69020	Soybean	extracellular	43.32	49.14
KRG97291	Soybean	extracellular	12.85	48.57
KRG94370	Soybean	extracellular	43.58	47.4
KRG97292	Soybean	extracellular	43.58	47.27
KRH47690	Soybean	extracellular, vacuole	42.57	46.17
KRH13793	Soybean	nucleus	40.81	43.9
KRH13794	Soybean	nucleus	40.81	43.9
KRH06261	Soybean	extracellular, vacuole	40.55	42.82
KRH06260	Soybean	cytosol, peroxisome	29.22	42.65
KRH47692	Soybean	extracellular, vacuole	40.3	42.55
KRH07083	Soybean	extracellular	28.72	41.45

Protein Annotations

EMBL:ACUP02009353	EnsemblPlants:KRH12619	EnsemblPlantsGene:GLYMA_15G182900	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF247	PFAM:PF00657	ProteinID:KRH12619	ProteinID:KRH12619.1	SEG:seg
SUPFAM:SSF52266	UniParc:UPI000295839D	UniProt:K7MC78	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr15:-:18020785..18023088

Molecular Weight (calculated)

44359.4 Da

IEP (calculated)

6.310

GRAVY (calculated)

-0.304

Length

397 amino acids

Sequence
(BLAST)

001: MDCSFVCITL IQFIASMSFS KSQSLINETN TSTTTTTTKA FFIFGDSSVD SGNNNYINTI PENKADYKPY GQNGFFQKPT GRFSDGRVIV DFIAEYAKLP
101: QIPPFLQPNA DYSNGVNFAS GGAGVLAETN QGLAIDLQTQ LSHFEEVRKS LSEKLGEKKT KELISEAIYF ISIGSNDYMG YLGNPKMQES YNTEQYVWMV
201: IGNLIRAIQT LHEKGARKFG FLGLCPLGCL PALRALNPVA NKSGCFEAAS ALALAHNNAL KLFLPNLKPY LEGFMYSYSS FYNWLRDRID NPTKYGFKDG
301: VNACCGSGPY GGVFTCGGTK KVEEFSLCDN VEYHVWWDSF HPTEKIHEQF AKEMWNGSPC SVRPYTLEDF FSKNEMIKPT ISNVVDSPKT EHGQFHY

Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)

001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP

Arabidopsis Description

GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.