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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • extracellular 6
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 5
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG94370
KRG97291
KRG97292
KRH06260
KRH07083
KRH13793
KRH13794
KRH25456
KRH29658
KRH29659
KRH42483
KRH43441
KRH47690
KRH58580
KRH68153
KRH69020

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 KRH42483 AT2G01950.1 19000166
AT1G54010.1 KRH58580 AT2G01950.1 19000166
AT1G54030.1 KRH25456 AT1G52400.1 23155454
AT1G54030.1 KRH29658 AT1G52400.1 23155454
AT1G54030.1 KRH29659 AT1G52400.1 23155454
AT1G54030.1 KRH43441 AT1G52400.1 23155454
AT1G54030.1 KRG94370 AT1G54000.1 23155454
AT1G54030.1 KRG97291 AT1G54000.1 23155454
AT1G54030.1 KRG97292 AT1G54000.1 23155454
AT1G54030.1 KRH06260 AT1G54000.1 23155454
AT1G54030.1 KRH07083 AT1G54000.1 23155454
AT1G54030.1 KRH13793 AT1G54000.1 23155454
AT1G54030.1 KRH13794 AT1G54000.1 23155454
AT1G54030.1 KRH47690 AT1G54000.1 23155454
AT1G54030.1 KRH69020 AT1G54000.1 23155454
AT1G54030.1 KRG94370 AT1G54010.1 23155454
AT1G54030.1 KRG97291 AT1G54010.1 23155454
AT1G54030.1 KRG97292 AT1G54010.1 23155454
AT1G54030.1 KRH06260 AT1G54010.1 23155454
AT1G54030.1 KRH07083 AT1G54010.1 23155454
AT1G54030.1 KRH13793 AT1G54010.1 23155454
AT1G54030.1 KRH13794 AT1G54010.1 23155454
AT1G54030.1 KRH47690 AT1G54010.1 23155454
AT1G54030.1 KRH69020 AT1G54010.1 23155454
AT1G54030.1 KRG94370 AT1G54020.2 23155454
AT1G54030.1 KRG97291 AT1G54020.2 23155454
AT1G54030.1 KRG97292 AT1G54020.2 23155454
AT1G54030.1 KRH06260 AT1G54020.2 23155454
AT1G54030.1 KRH07083 AT1G54020.2 23155454
AT1G54030.1 KRH13793 AT1G54020.2 23155454
AT1G54030.1 KRH13794 AT1G54020.2 23155454
AT1G54030.1 KRH47690 AT1G54020.2 23155454
AT1G54030.1 KRH69020 AT1G54020.2 23155454
AT1G54030.1 KRH68153 AT1G58270.1 23155454
AT1G54030.1 KRH25456 AT3G09260.1 23155454
AT1G54030.1 KRH29658 AT3G09260.1 23155454
AT1G54030.1 KRH29659 AT3G09260.1 23155454
AT1G54030.1 KRH43441 AT3G09260.1 23155454
AT1G54030.1 KRG94370 AT3G14210.1 23155454
AT1G54030.1 KRG97291 AT3G14210.1 23155454
AT1G54030.1 KRG97292 AT3G14210.1 23155454
AT1G54030.1 KRH06260 AT3G14210.1 23155454
AT1G54030.1 KRH07083 AT3G14210.1 23155454
AT1G54030.1 KRH13793 AT3G14210.1 23155454
AT1G54030.1 KRH13794 AT3G14210.1 23155454
AT1G54030.1 KRH47690 AT3G14210.1 23155454
AT1G54030.1 KRH69020 AT3G14210.1 23155454
AT1G54030.1 KRH68153 AT3G20370.1 23155454
AT1G54030.1 KRH25456 AT3G21370.1 23155454
AT1G54030.1 KRH29658 AT3G21370.1 23155454
AT1G54030.1 KRH29659 AT3G21370.1 23155454
AT1G54030.1 KRH43441 AT3G21370.1 23155454
AT3G14220.1 KRH42483 AT2G01950.1 19000166
AT3G14220.1 KRH58580 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH13794 Soybean nucleus 97.83 97.83
KRG97291 Soybean extracellular 17.07 60.0
KRH47690 Soybean extracellular, vacuole 56.64 57.1
VIT_09s0002g00510.t01 Wine grape extracellular 56.37 56.37
KRH69020 Soybean extracellular 52.57 55.43
KRG97292 Soybean extracellular 54.74 55.19
KRG94370 Soybean extracellular 54.2 54.79
VIT_09s0002g00530.t01 Wine grape cytosol 50.14 53.78
VIT_09s0002g00520.t01 Wine grape extracellular 44.72 51.72
KRH07083 Soybean extracellular 38.21 51.27
KRH06260 Soybean cytosol, peroxisome 37.67 51.1
Solyc11g051060.1.1 Tomato vacuole 49.05 50.28
VIT_09s0002g00540.t01 Wine grape extracellular 53.12 49.75
PGSC0003DMT400016126 Potato plasma membrane, vacuole 49.05 49.32
PGSC0003DMT400080416 Potato golgi, vacuole 48.24 49.17
VIT_09s0002g00500.t01 Wine grape cytosol 38.75 49.14
Solyc01g109020.1.1 Tomato extracellular 24.93 48.42
Solyc06g065010.2.1 Tomato nucleus 47.43 48.34
Solyc11g021040.1.1 Tomato extracellular 27.37 48.33
KRH06261 Soybean extracellular, vacuole 48.78 47.87
KRH47692 Soybean extracellular, vacuole 48.51 47.61
PGSC0003DMT400013272 Potato extracellular, vacuole 46.88 47.14
Solyc06g064990.2.1 Tomato extracellular 48.78 46.51
Solyc06g064960.2.1 Tomato extracellular 46.07 46.45
Solyc11g051100.1.1 Tomato cytosol, extracellular 8.4 43.66
Solyc06g064980.2.1 Tomato extracellular 45.26 43.6
PGSC0003DMT400074599 Potato cytosol 38.21 42.6
PGSC0003DMT400017106 Potato extracellular 42.55 42.43
Solyc04g028470.1.1 Tomato cytosol 36.31 41.88
KRH12620 Soybean vacuole 45.26 41.44
PGSC0003DMT400016123 Potato cytosol 9.76 41.38
KRH12619 Soybean endoplasmic reticulum, extracellular, vacuole 43.9 40.81
KRH37563 Soybean vacuole 44.44 40.29
KRH37561 Soybean cytosol 35.5 38.99
Solyc06g064970.2.1 Tomato extracellular, vacuole 36.31 37.43
Solyc11g051120.1.1 Tomato cytosol 13.01 33.1
CDY61480 Canola extracellular, vacuole 31.98 29.95
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 29.27 29.92
CDY54197 Canola extracellular, vacuole 31.98 29.87
Bra030911.1-P Field mustard extracellular, vacuole 31.98 29.87
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 31.44 29.44
CDY54192 Canola extracellular 10.57 29.1
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 30.08 28.53
CDY30680 Canola mitochondrion 31.17 28.47
Bra030915.1-P Field mustard extracellular 29.27 27.98
AT1G54020.2 Thale cress endoplasmic reticulum 28.18 27.96
CDY36628 Canola cytosol 29.0 27.94
Bra027359.1-P Field mustard extracellular 28.46 27.93
CDY08214 Canola cytosol 20.87 27.9
CDY08211 Canola endoplasmic reticulum, vacuole 29.0 27.79
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 29.0 27.79
CDY30675 Canola endoplasmic reticulum, vacuole 29.0 27.79
CDX97555 Canola extracellular 29.0 27.72
Bra037957.1-P Field mustard extracellular 28.73 27.68
AT3G14210.1 Thale cress extracellular, golgi 29.27 27.55
CDY54591 Canola extracellular 28.73 27.39
AT1G54010.1 Thale cress extracellular 28.46 27.2
AT3G14220.1 Thale cress vacuole 26.56 27.0
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 30.35 26.86
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 28.46 26.85
CDY39106 Canola vacuole 26.02 26.74
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 27.64 26.56
Bra014372.1-P Field mustard extracellular 27.64 26.56
CDX98428 Canola extracellular, plasma membrane, vacuole 27.91 26.55
CDX97556 Canola extracellular 27.91 26.55
Bra027358.1-P Field mustard extracellular 27.91 26.55
Bra021542.1-P Field mustard vacuole 25.75 26.46
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 27.37 26.37
CDY51412 Canola cytosol 27.37 26.37
CDY33240 Canola vacuole 25.47 26.18
CDY54588 Canola extracellular 27.37 26.17
CDY30676 Canola cytosol 17.89 25.98
CDY54196 Canola extracellular 27.37 25.96
CDY36623 Canola endoplasmic reticulum 26.56 25.59
CDY36625 Canola extracellular 9.21 25.0
CDY54194 Canola cytosol 18.97 25.0
Bra030913.1-P Field mustard cytosol 18.97 25.0
CDY51410 Canola mitochondrion, plastid 8.94 23.57
Bra030912.1-P Field mustard extracellular 27.37 22.7
CDY54198 Canola cytosol 7.32 20.3
Protein Annotations
EntrezGene:100808852Gene3D:3.40.50.1110MapMan:35.1EMBL:ACUP02009788InterPro:GDSLEnsemblPlantsGene:GLYMA_15G264200
GO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788UniProt:I1MJE9InterPro:IPR036514
EnsemblPlants:KRH13793ProteinID:KRH13793ProteinID:KRH13793.1PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF262
InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266SignalP:SignalP-noTMUniParc:UPI000233BE79:
Description
hypothetical protein
Coordinates
chr15:-:49844076..49848069
Molecular Weight (calculated)
40865.7 Da
IEP (calculated)
6.639
GRAVY (calculated)
-0.069
Length
369 amino acids
Sequence
(BLAST)
001: MAGSISLLEF SLVIFIQIMT HCHSSITTCL PEKHAALFIL GDSLFDNGNN NYINTTTSYQ ANYPPYGETF FKYPSGRFSD GRMIPDAVAE LAKLPILPPY
101: LHPGHVEYVY GVNFASGGAG ALRETSQGMV IDLKTQVSYL KNVKNLFSQR FGHAIAEEIL SKSVYLFNIG ANDYGSLLDP NSTSVLLPVD HQGFVDIVIG
201: NLTDAIKEIY NIGGKKFGFL NVPPIGCSPA IRILVNNGST CFEEFSAIAR LHNNALSKRL HELEKQLKGF KYSVMDFYSA FSQVFNNPTK YGFKVASVGC
301: CGSGPYRGVD SCGGNKGIKE YELCDNVNEH LFFDSHHLTD RASEYFAELI WNANRTVTSP YNLKQLFEL
Best Arabidopsis Sequence Match ( AT5G40990.1 )
(BLAST)
001: MENSQLVSIT FLAYTIIISI GSINCIDNNN LVTNQSALFV FGDSVFDAGN NNYIDTLSSV RSNYWPYGQT TFKSPTGRVS DGRLIPDFIA EYAWLPLIPP
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN
Arabidopsis Description
GLIP1GDSL esterase/lipase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLN0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.