Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36625 | Canola | extracellular | 35.73 | 94.85 |
| Bra037955.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 98.89 | 90.61 |
| CDY61480 | Canola | extracellular, vacuole | 85.6 | 78.43 |
| CDY54197 | Canola | extracellular, vacuole | 84.21 | 76.96 |
| CDY08214 | Canola | cytosol | 58.73 | 76.81 |
| CDY30680 | Canola | mitochondrion | 85.6 | 76.49 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 80.61 | 69.78 |
| CDY54192 | Canola | extracellular | 14.68 | 39.55 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 38.23 | 35.84 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 37.95 | 35.58 |
| CDY54591 | Canola | extracellular | 37.4 | 34.88 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 36.84 | 34.64 |
| CDY33240 | Canola | vacuole | 34.07 | 34.26 |
| CDY39106 | Canola | vacuole | 34.07 | 34.26 |
| CDY54588 | Canola | extracellular | 36.01 | 33.68 |
| CDY54196 | Canola | extracellular | 36.29 | 33.68 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 34.35 | 31.96 |
| CDX97555 | Canola | extracellular | 34.07 | 31.87 |
| KRH69020 | Soybean | extracellular | 30.75 | 31.71 |
| CDY51412 | Canola | cytosol | 33.52 | 31.59 |
| KRG97291 | Soybean | extracellular | 9.14 | 31.43 |
| CDX97556 | Canola | extracellular | 33.52 | 31.19 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 31.58 | 31.15 |
| KRH47690 | Soybean | extracellular, vacuole | 31.3 | 30.87 |
| CDY36623 | Canola | endoplasmic reticulum | 32.41 | 30.55 |
| CDY30676 | Canola | cytosol | 21.33 | 30.32 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 30.47 | 30.22 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 31.02 | 30.19 |
| KRH13794 | Soybean | nucleus | 30.75 | 30.08 |
| CDY36628 | Canola | cytosol | 31.86 | 30.03 |
| KRG94370 | Soybean | extracellular | 30.19 | 29.86 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 5.82 | 29.58 |
| CDY02490 | Canola | extracellular, vacuole | 30.19 | 29.38 |
| CDY30674 | Canola | extracellular, vacuole | 30.19 | 29.3 |
| KRH13793 | Soybean | nucleus | 29.92 | 29.27 |
| CDY24064 | Canola | plasma membrane | 30.47 | 29.26 |
| Solyc11g051060.1.1 | Tomato | vacuole | 29.09 | 29.17 |
| Solyc04g028470.1.1 | Tomato | cytosol | 25.48 | 28.75 |
| CDY36617 | Canola | plasma membrane | 27.42 | 28.61 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 29.09 | 28.61 |
| Solyc01g109020.1.1 | Tomato | extracellular | 14.96 | 28.42 |
| CDX97557 | Canola | extracellular | 29.36 | 28.42 |
| CDX98432 | Canola | extracellular | 29.36 | 28.42 |
| PGSC0003DMT400074599 | Potato | cytosol | 26.04 | 28.4 |
| CDX97558 | Canola | extracellular | 29.09 | 28.07 |
| CDX98433 | Canola | extracellular, vacuole | 29.09 | 28.07 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 27.98 | 27.9 |
| Solyc06g065010.2.1 | Tomato | nucleus | 27.98 | 27.9 |
| KRG97292 | Soybean | extracellular | 28.25 | 27.87 |
| CDY54194 | Canola | cytosol | 21.61 | 27.86 |
| KRH07083 | Soybean | extracellular | 20.78 | 27.27 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 27.98 | 27.22 |
| CDY69407 | Canola | extracellular | 18.84 | 27.09 |
| PGSC0003DMT400017106 | Potato | extracellular | 27.7 | 27.03 |
| CDY25680 | Canola | extracellular, plasma membrane | 12.47 | 26.95 |
| CDY69208 | Canola | mitochondrion | 23.27 | 26.92 |
| Solyc11g021040.1.1 | Tomato | extracellular | 15.51 | 26.79 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 27.15 | 26.7 |
| Solyc06g064960.2.1 | Tomato | extracellular | 26.87 | 26.5 |
| CDY02491 | Canola | plastid | 12.47 | 26.47 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 9.42 | 25.95 |
| Solyc06g064990.2.1 | Tomato | extracellular | 27.42 | 25.58 |
| Solyc06g064980.2.1 | Tomato | extracellular | 26.87 | 25.33 |
| CDY71922 | Canola | extracellular, plasma membrane | 14.96 | 24.32 |
| CDY51410 | Canola | mitochondrion, plastid | 9.42 | 24.29 |
| KRH06260 | Soybean | cytosol, peroxisome | 18.28 | 24.26 |
| Solyc11g051120.1.1 | Tomato | cytosol | 9.7 | 24.14 |
| PGSC0003DMT400016123 | Potato | cytosol | 5.54 | 22.99 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 22.71 | 22.91 |
| CDX75755 | Canola | plastid | 21.88 | 18.41 |
| CDY54198 | Canola | cytosol | 6.37 | 17.29 |
Protein Annotations
| EnsemblPlants:CDY51411 | EnsemblPlantsGene:GSBRNA2T00003345001 | Gene3D:3.40.50.1110 | GO:A0A078IN56 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF461 | PFAM:PF00657 | ProteinID:CDY51411 | ProteinID:CDY51411.1 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEBC49 | UniProt:A0A078IN56 | MapMan:35.1 | : |
Description
BnaA06g01420DBnaA06g01420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN56]
Coordinates
chrLK032992:-:78817..81070
Molecular Weight (calculated)
39919.7 Da
IEP (calculated)
6.669
GRAVY (calculated)
-0.075
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPKSHLFS LSFFSFLLLH FPTVSLAQTL FVFGDGLYDT GNKQIISSNR VDASFPPYGN TLGEATGRWS DGLIIPDYLA GFMNIPQIPP VLRSTSDFSH
101: GANFAIADAT VLGSPPETLT LSQQVMKFSE NKNKWTIQAR SEAIYLFYIG SNDYLNYAKN NPNPSADQKE AFVDRVITSI EAELKVIYGS GGRKFALQNL
201: APLGCLPAVK QASGNVQECV RLPSEMAALH NKKLLQLLVE LSRELSGFQY SFYDFFSSIQ NRVIKSKTYT FETGIAACCG TGSVNGSSCS TYNAGHLMWG
301: SDPVVIGPNN LRELLFLPLD TMAATRPRQI KIESIYDIKK IESEMETQWL YQVDKASSFL I
101: GANFAIADAT VLGSPPETLT LSQQVMKFSE NKNKWTIQAR SEAIYLFYIG SNDYLNYAKN NPNPSADQKE AFVDRVITSI EAELKVIYGS GGRKFALQNL
201: APLGCLPAVK QASGNVQECV RLPSEMAALH NKKLLQLLVE LSRELSGFQY SFYDFFSSIQ NRVIKSKTYT FETGIAACCG TGSVNGSSCS TYNAGHLMWG
301: SDPVVIGPNN LRELLFLPLD TMAATRPRQI KIESIYDIKK IESEMETQWL YQVDKASSFL I
001: MLLIPSFTAN SNEPPPSKLS LSDLSMAILK SHFFLLFPLL LLHFHTVSFA QTLFVFGDGL YDAGNKQFLS QNRVDASFPP YGVTVGQATG RWSDGSIVPD
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
Arabidopsis Description
MVP1Inactive GDSL esterase/lipase-like protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA74]
SUBAcon: [vacuole,endoplasmic reticulum,nucleus]
SUBAcon: [vacuole,endoplasmic reticulum,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.