Factsheet for Solyc06g064960.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g081170.1.1
Solyc01g109020.1.1
Solyc04g008430.1.1
Solyc04g028470.1.1
Solyc06g064960.2.1
Solyc06g064970.2.1
Solyc06g064980.2.1
Solyc06g064990.2.1
Solyc06g065010.2.1
Solyc11g021040.1.1
Solyc11g051060.1.1
Solyc11g051100.1.1
Solyc11g051120.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54010.1	Solyc04g008430.1.1	AT2G01950.1	19000166
AT1G54030.1	Solyc01g081170.1.1	AT1G52400.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc01g081170.1.1	AT3G09260.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc01g081170.1.1	AT3G21370.1	23155454
AT3G14220.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g021040.1.1	Tomato	extracellular	49.45	86.6
Solyc01g109020.1.1	Tomato	extracellular	44.26	85.26
Solyc06g064990.2.1	Tomato	extracellular	81.97	77.52
Solyc06g064980.2.1	Tomato	extracellular	79.78	76.24
Solyc06g065010.2.1	Tomato	nucleus	70.22	70.99
Solyc06g064970.2.1	Tomato	extracellular, vacuole	65.3	66.76
Solyc11g051060.1.1	Tomato	vacuole	61.48	62.5
KRG97291	Soybean	extracellular	16.67	58.1
Solyc11g051100.1.1	Tomato	cytosol, extracellular	10.66	54.93
KRG97292	Soybean	extracellular	50.82	50.82
KRG94370	Soybean	extracellular	50.27	50.41
VIT_09s0002g00510.t01	Wine grape	extracellular	50.82	50.41
KRH69020	Soybean	extracellular	48.09	50.29
VIT_09s0002g00530.t01	Wine grape	cytosol	46.72	49.71
VIT_09s0002g00520.t01	Wine grape	extracellular	42.9	49.22
VIT_09s0002g00500.t01	Wine grape	cytosol	39.07	49.14
VIT_09s0002g00540.t01	Wine grape	extracellular	52.19	48.48
AT1G53970.2	Thale cress	cytosol	12.84	48.45
KRH07083	Soybean	extracellular	36.34	48.36
Solyc12g049550.1.1	Tomato	extracellular	47.27	47.4
Bra039701.1-P	Field mustard	extracellular, plasma membrane	41.53	47.35
KRH13794	Soybean	nucleus	47.27	46.88
CDY02490	Canola	extracellular, vacuole	46.72	46.09
Bra030917.1-P	Field mustard	extracellular, vacuole	46.72	46.09
KRH13793	Soybean	nucleus	46.45	46.07
KRH06260	Soybean	cytosol, peroxisome	34.15	45.96
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	45.9	45.9
CDY24064	Canola	plasma membrane	46.99	45.74
KRH47690	Soybean	extracellular, vacuole	45.63	45.63
VIT_09s0002g00550.t01	Wine grape	extracellular	45.08	45.33
CDY36617	Canola	plasma membrane	42.62	45.09
CDX98433	Canola	extracellular, vacuole	45.63	44.65
Bra027356.1-P	Field mustard	extracellular	45.36	44.38
CDX97558	Canola	extracellular	45.36	44.38
CDY30674	Canola	extracellular, vacuole	45.08	44.35
VIT_09s0002g00570.t01	Wine grape	extracellular	44.54	43.94
Bra014375.1-P	Field mustard	extracellular, vacuole	44.26	43.55
Solyc04g028470.1.1	Tomato	cytosol	37.7	43.12
CDY36619	Canola	endoplasmic reticulum, plasma membrane	43.44	42.86
Bra030916.1-P	Field mustard	plastid	42.35	42.7
AT5G40990.1	Thale cress	plasma membrane	43.17	42.25
AT1G53940.2	Thale cress	plasma membrane	43.17	42.02
AT1G53990.1	Thale cress	extracellular, plasma membrane	41.26	41.14
AT3G14225.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	42.35	41.11
Solyc11g051120.1.1	Tomato	cytosol	16.12	40.69
CDY69407	Canola	extracellular	27.6	40.24
CDX98432	Canola	extracellular	40.71	39.95
CDX97557	Canola	extracellular	40.44	39.68
Bra027357.1-P	Field mustard	extracellular	40.16	39.41
CDY69208	Canola	mitochondrion	33.06	38.78
CDY71922	Canola	extracellular, plasma membrane	21.04	34.68
Solyc04g007570.1.1	Tomato	extracellular, plasma membrane, vacuole	31.42	31.51
CDY33240	Canola	vacuole	27.6	28.13
CDY61480	Canola	extracellular, vacuole	30.05	27.92
CDY39106	Canola	vacuole	27.32	27.86
Bra021542.1-P	Field mustard	vacuole	27.32	27.86
Bra030911.1-P	Field mustard	extracellular, vacuole	29.78	27.59
CDY54197	Canola	extracellular, vacuole	29.78	27.59
AT3G14220.1	Thale cress	vacuole	27.32	27.55
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	29.23	27.16
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	26.5	26.87
CDY54192	Canola	extracellular	9.84	26.87
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	28.42	26.74
Bra037957.1-P	Field mustard	extracellular	27.32	26.11
CDY30680	Canola	mitochondrion	28.42	25.74
CDY08214	Canola	cytosol	19.4	25.72
CDY36628	Canola	cytosol	26.78	25.59
AT3G14210.1	Thale cress	extracellular, golgi	27.32	25.51
CDY30675	Canola	endoplasmic reticulum, vacuole	26.78	25.45
CDX75755	Canola	plastid	29.78	25.41
Bra030915.1-P	Field mustard	extracellular	26.78	25.39
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	26.5	25.19
CDY08211	Canola	endoplasmic reticulum, vacuole	26.5	25.19
CDY51412	Canola	cytosol	26.23	25.07
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	26.23	25.07
CDY54591	Canola	extracellular	26.5	25.06
AT1G54000.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	26.78	25.06
AT1G54010.1	Thale cress	extracellular	26.23	24.87
AT1G54020.2	Thale cress	endoplasmic reticulum	25.14	24.73
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	25.68	24.48
CDY36623	Canola	endoplasmic reticulum	25.41	24.28
Bra014372.1-P	Field mustard	extracellular	25.41	24.22
CDX97555	Canola	extracellular	25.41	24.09
Bra027359.1-P	Field mustard	extracellular	24.59	23.94
CDY54588	Canola	extracellular	25.14	23.83
CDX98428	Canola	extracellular, plasma membrane, vacuole	25.14	23.71
CDY54196	Canola	extracellular	25.14	23.65
CDY30676	Canola	cytosol	16.39	23.62
CDY51410	Canola	mitochondrion, plastid	9.02	23.57
Bra027358.1-P	Field mustard	extracellular	24.86	23.45
CDX97556	Canola	extracellular	24.86	23.45
CDY54194	Canola	cytosol	17.76	23.21
Bra030913.1-P	Field mustard	cytosol	17.76	23.21
AT1G54030.1	Thale cress	endoplasmic reticulum, nucleus, vacuole	26.23	23.02
CDY36625	Canola	extracellular	8.2	22.06
Bra030912.1-P	Field mustard	extracellular	25.14	20.67
CDY54198	Canola	cytosol	6.56	18.05

Protein Annotations

EnsemblPlants:Solyc06g064960.2.1	EnsemblPlantsGene:Solyc06g064960.2	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF262	PFAM:PF00657	SignalP:SignalP-noTM	UniParc:UPI00027670EF	UniProt:K4C7C5	MapMan:35.1

Description

No Description!

Coordinates

chr6:+:40508018..40509700

Molecular Weight (calculated)

40936.6 Da

IEP (calculated)

8.709

GRAVY (calculated)

0.036

Length

366 amino acids

Sequence
(BLAST)

001: MALMSNLCIF VLVAHFATTV VCHERPHQAA LFVFGDSIFD PGNNNYINTI ASFQANYFPY GESFFKYPTG RNSNGRLIPD FIAEYANLPF ILPYFEIGKK
101: HLVNGVNFAS GGSGCLAETA RGFVIDLQTQ LKYFQNVGKL LQKKVGETES KQILSNAVYI FSTVSNDMFA PLFANSSFPY SDTEYLQMIM GNLTSVLKGI
201: YKEGGRKFVM FNLAPLGCLP LMRALNLQIG VTNGSCMEKA TNLAKMFNSA LPTMFKKLEK QLPGFKYTIF NFFKVIADSI HNPTKYGLKI SETACCGTGS
301: FRGILSCGGK RQVKEYELCK NVKDYLFFDS VHPSEQAYLK YTELLWNGTL DVVAPYNLKS FFELST

Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)

001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP

Arabidopsis Description

GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.