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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • extracellular 2
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:extracellular, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX73966
CDX82246
CDX82248
CDX82249
CDX82251
CDX82402
CDX83143
CDX89595
CDX97555
CDY07912
CDY08211
CDY08213
CDY25415
CDY29822
CDY30675
CDY30676
CDY34004
CDY36039
CDY36040
CDY36623
CDY36628
CDY37297
CDY39666
CDY40155
CDY43080
CDY43081
CDY45300
CDY49904
CDY50083
CDY50084
CDY50282
CDY51410
CDY51412
CDY52969
CDY53521
CDY53522
CDY54192
CDY54194
CDY54196
CDY54198
CDY54588
CDY54591
CDY59555

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54030.1 CDY40155 AT1G52400.1 23155454
AT1G54030.1 CDY49904 AT1G52400.1 23155454
AT1G54030.1 CDY52969 AT1G52400.1 23155454
AT1G54030.1 CDY08211 AT1G54000.1 23155454
AT1G54030.1 CDY08213 AT1G54000.1 23155454
AT1G54030.1 CDY30675 AT1G54000.1 23155454
AT1G54030.1 CDY30676 AT1G54000.1 23155454
AT1G54030.1 CDY54192 AT1G54000.1 23155454
AT1G54030.1 CDY54196 AT1G54000.1 23155454
AT1G54030.1 CDY54588 AT1G54000.1 23155454
AT1G54030.1 CDY54591 AT1G54000.1 23155454
AT1G54030.1 CDY08211 AT1G54010.1 23155454
AT1G54030.1 CDY08213 AT1G54010.1 23155454
AT1G54030.1 CDY30675 AT1G54010.1 23155454
AT1G54030.1 CDY30676 AT1G54010.1 23155454
AT1G54030.1 CDY54192 AT1G54010.1 23155454
AT1G54030.1 CDY54196 AT1G54010.1 23155454
AT1G54030.1 CDY54588 AT1G54010.1 23155454
AT1G54030.1 CDY54591 AT1G54010.1 23155454
AT1G54030.1 CDY36623 AT1G54020.2 23155454
AT1G54030.1 CDY36628 AT1G54020.2 23155454
AT1G54030.1 CDY51410 AT1G54020.2 23155454
AT1G54030.1 CDY51412 AT1G54020.2 23155454
AT1G54030.1 CDY54194 AT1G54020.2 23155454
AT1G54030.1 CDY54198 AT1G54020.2 23155454
AT1G54030.1 CDX73966 AT3G09260.1 23155454
AT1G54030.1 CDY07912 AT3G09260.1 23155454
AT1G54030.1 CDX97555 AT3G14210.1 23155454
AT1G54030.1 CDX82402 AT3G16420.1 23155454
AT1G54030.1 CDX82246 AT3G20370.1 23155454
AT1G54030.1 CDX82248 AT3G20370.1 23155454
AT1G54030.1 CDX82249 AT3G20370.1 23155454
AT1G54030.1 CDX82251 AT3G20370.1 23155454
AT1G54030.1 CDX83143 AT3G20370.1 23155454
AT1G54030.1 CDX89595 AT3G20370.1 23155454
AT1G54030.1 CDY25415 AT3G20370.1 23155454
AT1G54030.1 CDY29822 AT3G20370.1 23155454
AT1G54030.1 CDY34004 AT3G20370.1 23155454
AT1G54030.1 CDY36039 AT3G20370.1 23155454
AT1G54030.1 CDY36040 AT3G20370.1 23155454
AT1G54030.1 CDY39666 AT3G20370.1 23155454
AT1G54030.1 CDY43080 AT3G20370.1 23155454
AT1G54030.1 CDY43081 AT3G20370.1 23155454
AT1G54030.1 CDY50083 AT3G20370.1 23155454
AT1G54030.1 CDY50084 AT3G20370.1 23155454
AT1G54030.1 CDY50282 AT3G20370.1 23155454
AT1G54030.1 CDY37297 AT3G21370.1 23155454
AT1G54030.1 CDY45300 AT3G21370.1 23155454
AT1G54030.1 CDY53521 AT3G21370.1 23155454
AT1G54030.1 CDY53522 AT3G21370.1 23155454
AT1G54030.1 CDY59555 AT3G21370.1 23155454
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08214 Canola cytosol 65.59 96.01
CDY36625 Canola extracellular 29.21 86.76
CDY61480 Canola extracellular, vacuole 84.41 86.55
CDY54197 Canola extracellular, vacuole 84.41 86.33
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 76.49 85.6
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 79.7 77.22
CDY54192 Canola extracellular 13.37 40.3
CDY33240 Canola vacuole 33.91 38.16
CDY39106 Canola vacuole 33.91 38.16
CDY08211 Canola endoplasmic reticulum, vacuole 36.14 37.92
CDY30675 Canola endoplasmic reticulum, vacuole 35.89 37.66
PGSC0003DMT400016123 Potato cytosol 7.92 36.78
CDY54591 Canola extracellular 35.15 36.69
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 34.65 36.46
CDY54196 Canola extracellular 33.91 35.22
CDX98428 Canola extracellular, plasma membrane, vacuole 33.66 35.05
CDY54588 Canola extracellular 33.42 34.97
CDX97555 Canola extracellular 32.92 34.46
CDX97556 Canola extracellular 32.92 34.28
CDY51412 Canola cytosol 31.93 33.68
CDY30676 Canola cytosol 21.04 33.46
CDY36623 Canola endoplasmic reticulum 31.68 33.42
CDY36628 Canola cytosol 31.44 33.16
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 29.95 33.06
VIT_09s0002g00550.t01 Wine grape extracellular 29.46 32.69
KRH13794 Soybean nucleus 29.21 31.98
KRH69020 Soybean extracellular 27.48 31.71
CDY36619 Canola endoplasmic reticulum, plasma membrane 28.96 31.54
KRH13793 Soybean nucleus 28.47 31.17
KRH47690 Soybean extracellular, vacuole 28.22 31.15
Solyc11g051060.1.1 Tomato vacuole 27.72 31.11
CDY24064 Canola plasma membrane 28.71 30.85
KRG94370 Soybean extracellular 27.72 30.68
CDY30674 Canola extracellular, vacuole 28.22 30.65
CDX97557 Canola extracellular 28.22 30.56
CDX98432 Canola extracellular 28.22 30.56
PGSC0003DMT400016126 Potato plasma membrane, vacuole 27.72 30.52
CDY36617 Canola plasma membrane 25.99 30.35
CDY69407 Canola extracellular 18.81 30.28
CDY02490 Canola extracellular, vacuole 27.72 30.19
CDY51410 Canola mitochondrion, plastid 10.4 30.0
CDY54194 Canola cytosol 20.79 30.0
VIT_09s0002g00570.t01 Wine grape extracellular 27.48 29.92
Solyc11g051100.1.1 Tomato cytosol, extracellular 5.2 29.58
KRG97291 Soybean extracellular 7.67 29.52
CDY09515 Canola endoplasmic reticulum, extracellular, golgi 9.41 29.01
PGSC0003DMT400080416 Potato golgi, vacuole 25.99 29.01
KRG97292 Soybean extracellular 26.24 28.96
CDY69208 Canola mitochondrion 22.28 28.85
Solyc04g028470.1.1 Tomato cytosol 22.77 28.75
PGSC0003DMT400074599 Potato cytosol 23.51 28.7
PGSC0003DMT400013272 Potato extracellular, vacuole 25.99 28.61
Solyc06g065010.2.1 Tomato nucleus 25.5 28.45
Solyc06g064960.2.1 Tomato extracellular 25.74 28.42
PGSC0003DMT400017106 Potato extracellular 25.99 28.38
KRH07083 Soybean extracellular 19.31 28.36
CDX97558 Canola extracellular 26.24 28.34
CDX98433 Canola extracellular, vacuole 26.24 28.34
Solyc06g064990.2.1 Tomato extracellular 26.98 28.17
Solyc06g064980.2.1 Tomato extracellular 25.74 27.15
Solyc01g109020.1.1 Tomato extracellular 12.38 26.32
CDY25680 Canola extracellular, plasma membrane 10.64 25.75
KRH06260 Soybean cytosol, peroxisome 17.33 25.74
CDY02491 Canola plastid 10.64 25.29
CDY71922 Canola extracellular, plasma membrane 13.86 25.23
CDY54198 Canola cytosol 8.17 24.81
Solyc11g021040.1.1 Tomato extracellular 12.62 24.4
Solyc06g064970.2.1 Tomato extracellular, vacuole 21.04 23.74
Solyc11g051120.1.1 Tomato cytosol 8.42 23.45
CDX75755 Canola plastid 20.05 18.88
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1GO:A0A078GW30UniProt:A0A078GW30EnsemblPlants:CDY30680ProteinID:CDY30680
ProteinID:CDY30680.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788
EnsemblPlantsGene:GSBRNA2T00046009001InterPro:IPR036514PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF461InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_likeSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EB576BSEG:seg:
Description
BnaC06g10440DBnaC06g10440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GW30]
Coordinates
chrLK032257:+:471185..473572
Molecular Weight (calculated)
44966.7 Da
IEP (calculated)
6.174
GRAVY (calculated)
-0.125
Length
404 amino acids
Sequence
(BLAST)
001: MWFMANQTRR RRFTIMANPK SHLFSLLLLH FSTVSLAQTL FVFGDGLYDA GNKQFVSSNR VDASFPPYGI TLGEATGRWS DGRIVPDYLA SFMGISQIPP
101: ILHGTADFSH GANFAIADAT ALGSPPETMT LSQQVIKFSE NKNKWTPQAR SEAIYLFYIA SDDYLNYAKN NPNPSDDQKQ AFVGRVIAAI EAELKVIYGS
201: GARKFAFQNL APLGCLPAVK QANGNVQECV RLPSEMAELH NKKLLQLLVE LSRQLSGFQY SFYDFFSSIQ NRVIKSKTYT FETGMAACCG TGSVNGTSCS
301: TSNVCAKPED YLFFDGKHLT QEGNLQVGHL IWGSDPEVVG PNNLRELLFL PLDITVTLAD IQEAMVATMP RQIKIESLYD IKKMEAEMEN QWLYEVDKAT
401: SFLI
Best Arabidopsis Sequence Match ( AT1G54030.1 )
(BLAST)
001: MLLIPSFTAN SNEPPPSKLS LSDLSMAILK SHFFLLFPLL LLHFHTVSFA QTLFVFGDGL YDAGNKQFLS QNRVDASFPP YGVTVGQATG RWSDGSIVPD
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
Arabidopsis Description
MVP1Inactive GDSL esterase/lipase-like protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA74]
SUBAcon: [nucleus,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.