CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97557	Canola	extracellular	98.93	98.93
AT3G14225.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	83.91	83.02
CDY02490	Canola	extracellular, vacuole	64.88	65.23
CDY36619	Canola	endoplasmic reticulum, plasma membrane	63.81	64.15
CDY69407	Canola	extracellular	42.63	63.35
CDY24064	Canola	plasma membrane	63.81	63.3
CDY36617	Canola	plasma membrane	58.18	62.72
CDY69208	Canola	mitochondrion	50.4	60.26
CDY30674	Canola	extracellular, vacuole	60.05	60.22
CDX75755	Canola	plastid	61.93	53.85
CDX97558	Canola	extracellular	53.89	53.74
CDX98433	Canola	extracellular, vacuole	53.35	53.21
Solyc11g051060.1.1	Tomato	vacuole	43.97	45.56
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	44.77	45.5
CDY71922	Canola	extracellular, plasma membrane	27.08	45.5
PGSC0003DMT400016123	Potato	cytosol	10.19	43.68
PGSC0003DMT400080416	Potato	golgi, vacuole	40.48	41.71
Solyc01g109020.1.1	Tomato	extracellular	21.18	41.58
Solyc06g065010.2.1	Tomato	nucleus	39.95	41.16
PGSC0003DMT400013272	Potato	extracellular, vacuole	40.21	40.87
Solyc11g051100.1.1	Tomato	cytosol, extracellular	7.77	40.85
Solyc06g064960.2.1	Tomato	extracellular	39.95	40.71
Solyc11g021040.1.1	Tomato	extracellular	22.79	40.67
Solyc06g064990.2.1	Tomato	extracellular	41.55	40.05
Solyc06g064980.2.1	Tomato	extracellular	40.75	39.69
PGSC0003DMT400017106	Potato	extracellular	38.61	38.92
CDY25680	Canola	extracellular, plasma membrane	16.89	37.72
CDY02491	Canola	plastid	16.89	37.06
PGSC0003DMT400074599	Potato	cytosol	31.64	35.65
Solyc04g028470.1.1	Tomato	cytosol	29.22	34.06
Solyc06g064970.2.1	Tomato	extracellular, vacuole	31.9	33.24
CDY33240	Canola	vacuole	29.49	30.64
CDY09515	Canola	endoplasmic reticulum, extracellular, golgi	10.72	30.53
CDY39106	Canola	vacuole	29.22	30.36
Solyc11g051120.1.1	Tomato	cytosol	11.8	30.34
CDY61480	Canola	extracellular, vacuole	31.64	29.95
CDY54197	Canola	extracellular, vacuole	31.64	29.87
CDY54192	Canola	extracellular	10.72	29.85
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	28.42	29.36
CDY30675	Canola	endoplasmic reticulum, vacuole	30.29	29.35
CDY08211	Canola	endoplasmic reticulum, vacuole	30.03	29.09
CDY36628	Canola	cytosol	29.49	28.72
CDY54591	Canola	extracellular	29.76	28.68
CDY08214	Canola	cytosol	20.91	28.26
CDY30680	Canola	mitochondrion	30.56	28.22
CDX97555	Canola	extracellular	28.95	27.98
CDY51412	Canola	cytosol	28.42	27.68
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	28.42	27.6
CDX97556	Canola	extracellular	28.69	27.58
CDX98428	Canola	extracellular, plasma membrane, vacuole	28.42	27.32
CDY36623	Canola	endoplasmic reticulum	27.88	27.15
CDY54588	Canola	extracellular	27.88	26.94
CDY54196	Canola	extracellular	27.88	26.74
CDY30676	Canola	cytosol	17.69	25.98
CDY36625	Canola	extracellular	9.38	25.74
CDY51410	Canola	mitochondrion, plastid	9.12	24.29
CDY54194	Canola	cytosol	17.96	23.93
CDY54198	Canola	cytosol	8.04	22.56

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	GO:A0A078EBP1	EnsemblPlants:CDX98432	ProteinID:CDX98432	ProteinID:CDX98432.1
InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016298	GO:GO:0016787	GO:GO:0016788	EnsemblPlantsGene:GSBRNA2T00106034001	InterPro:IPR036514	InterPro:Lipase_GDSL_AS
PFAM:PF00657	ScanProsite:PS01098	PFscan:PS51257	PANTHER:PTHR22835	PANTHER:PTHR22835:SF301	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	UniParc:UPI0004EDD351	SEG:seg	:

Description

BnaC05g39430D

Coordinates

chrLK031905:-:47578..49017

Molecular Weight (calculated)

41272.0 Da

IEP (calculated)

7.982

GRAVY (calculated)

-0.123

Length

373 amino acids

Sequence
(BLAST)

001: MASSKFSSMI TILFICTLSL SFGSISCKND FVTNQAALFV FGDSLFEAGN NNYFDSLPGF RSNYWPYGKT TFQFPTGRVS DGRIMIDFIA EDAWLPLLPP
101: NLQPGYSSSQ LTYGLNFATT AAGVFAATFP GVSKDLGTQL SSFKNATQVL RSKLGDAEAR RVISKAVYLF HIGANDYQYP FFANTTTITT TTKERFVDFV
201: IGNTTNVIEE LYKMGARKFG FLSLGPYGCT PSMSITDPTK IGSCFEPVSE LINLHNQEFP KVLRRLERQL SGFKYSLHDF HTSLLQRINN PSQYGFKQGK
301: MACCGSGPLR GVNTCGFRNG PSQTYQLCEN ADDYIFFDPG HLTEKAHGQI AELIWSGSSD VTAPYNLKTL FGL

Best Arabidopsis Sequence Match ( AT3G14225.2 )
(BLAST)

001: MASPRFNSII IILFICTISL SIVSISCKED LKTNQAALFA FGDSLFEAGN NNYFDSISSF RSNFWPYGKT TFKFPTGRVS DGRIMIDFIA EYAWLPLIPP
101: NLQPGYSNSQ LTYGLNFATT AAGVFAGTFP GSSKDLGTQL NNFKNVEKTL RSNLGDAEAR RVISKAVYLF HIGANDYQYP FFANTSTFSN TTKERFIDFV
201: IGNTTTVIEE LYKLGARKFG FLSLGPFGCT PSALIINSTK IGSCFEPVTE LINLHNQEFP KVLRRLERRL SGFKYALHDF HTSLSQRINN PSRYGFKEGE
301: MACCGSGPLR GINTCGFRNG PSQGYKLCEN ADDYVFFDPS HLTETAHQQI AELIWSGPPN VTAPYNLKTL FRL

Arabidopsis Description

GLIP4GDSL esterase/lipase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJP1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.