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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g081170.1.1
Solyc01g109020.1.1
Solyc04g008430.1.1
Solyc04g028470.1.1
Solyc06g064960.2.1
Solyc06g064970.2.1
Solyc06g064980.2.1
Solyc06g064990.2.1
Solyc06g065010.2.1
Solyc11g021040.1.1
Solyc11g051060.1.1
Solyc11g051100.1.1
Solyc11g051120.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 Solyc04g008430.1.1 AT2G01950.1 19000166
AT1G54030.1 Solyc01g081170.1.1 AT1G52400.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc01g081170.1.1 AT3G09260.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc01g081170.1.1 AT3G21370.1 23155454
AT3G14220.1 Solyc04g008430.1.1 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g109020.1.1 Tomato extracellular 40.31 82.11
Solyc06g064960.2.1 Tomato extracellular 77.52 81.97
Solyc06g064980.2.1 Tomato extracellular 80.88 81.72
Solyc11g021040.1.1 Tomato extracellular 43.41 80.38
Solyc06g065010.2.1 Tomato nucleus 63.31 67.68
Solyc06g064970.2.1 Tomato extracellular, vacuole 58.91 63.69
Solyc11g051060.1.1 Tomato vacuole 56.59 60.83
KRG97291 Soybean extracellular 16.02 59.05
Solyc11g051100.1.1 Tomato cytosol, extracellular 10.08 54.93
VIT_09s0002g00510.t01 Wine grape extracellular 49.1 51.49
KRH69020 Soybean extracellular 46.51 51.43
VIT_09s0002g00530.t01 Wine grape cytosol 45.48 51.16
KRG97292 Soybean extracellular 48.06 50.82
KRG94370 Soybean extracellular 47.55 50.41
AT1G53970.2 Thale cress cytosol 12.4 49.48
KRH13794 Soybean nucleus 47.03 49.32
KRH07083 Soybean extracellular 34.88 49.09
KRH13793 Soybean nucleus 46.51 48.78
VIT_09s0002g00540.t01 Wine grape extracellular 49.35 48.48
Bra039701.1-P Field mustard extracellular, plasma membrane 40.05 48.29
Bra030917.1-P Field mustard extracellular, vacuole 45.74 47.71
CDY02490 Canola extracellular, vacuole 45.74 47.71
VIT_09s0002g00520.t01 Wine grape extracellular 39.28 47.65
VIT_09s0002g00500.t01 Wine grape cytosol 35.66 47.42
Solyc12g049550.1.1 Tomato extracellular 44.44 47.12
CDY24064 Canola plasma membrane 45.74 47.07
CDY30674 Canola extracellular, vacuole 44.96 46.77
Bra014375.1-P Field mustard extracellular, vacuole 44.44 46.24
CDY36617 Canola plasma membrane 41.09 45.95
KRH47690 Soybean extracellular, vacuole 43.15 45.63
CDY36619 Canola endoplasmic reticulum, plasma membrane 43.67 45.55
VIT_09s0002g00550.t01 Wine grape extracellular 42.64 45.33
Bra030916.1-P Field mustard plastid 42.12 44.9
KRH06260 Soybean cytosol, peroxisome 31.52 44.85
CDX98433 Canola extracellular, vacuole 43.15 44.65
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 42.12 44.54
CDX97558 Canola extracellular 42.89 44.38
Bra027356.1-P Field mustard extracellular 42.89 44.38
VIT_09s0002g00570.t01 Wine grape extracellular 42.38 44.2
AT1G53940.2 Thale cress plasma membrane 42.64 43.88
AT5G40990.1 Thale cress plasma membrane 42.38 43.85
Solyc04g028470.1.1 Tomato cytosol 35.92 43.44
AT1G53990.1 Thale cress extracellular, plasma membrane 41.09 43.32
AT3G14225.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 41.09 42.18
CDY69407 Canola extracellular 27.13 41.83
CDX98432 Canola extracellular 40.05 41.55
CDX97557 Canola extracellular 39.79 41.29
Bra027357.1-P Field mustard extracellular 39.53 41.02
CDY69208 Canola mitochondrion 32.04 39.74
CDY71922 Canola extracellular, plasma membrane 21.19 36.94
Solyc11g051120.1.1 Tomato cytosol 13.44 35.86
Solyc04g007570.1.1 Tomato extracellular, plasma membrane, vacuole 29.97 31.78
CDY61480 Canola extracellular, vacuole 29.46 28.93
Bra030911.1-P Field mustard extracellular, vacuole 29.2 28.61
CDY54197 Canola extracellular, vacuole 29.2 28.61
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 28.42 28.28
CDY33240 Canola vacuole 26.1 28.13
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 28.42 27.92
CDY39106 Canola vacuole 25.84 27.86
Bra021542.1-P Field mustard vacuole 25.84 27.86
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 25.58 27.42
CDX75755 Canola plastid 30.23 27.27
AT3G14220.1 Thale cress vacuole 25.58 27.27
CDY30680 Canola mitochondrion 28.17 26.98
CDY54192 Canola extracellular 9.3 26.87
Bra037957.1-P Field mustard extracellular 25.84 26.11
CDY08214 Canola cytosol 18.6 26.09
CDY36628 Canola cytosol 25.06 25.33
CDY30675 Canola endoplasmic reticulum, vacuole 25.06 25.19
AT3G14210.1 Thale cress extracellular, golgi 25.32 25.0
CDY51410 Canola mitochondrion, plastid 9.04 25.0
CDY08211 Canola endoplasmic reticulum, vacuole 24.81 24.94
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 24.81 24.94
Bra030915.1-P Field mustard extracellular 24.81 24.87
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 24.55 24.8
CDY51412 Canola cytosol 24.55 24.8
AT1G54020.2 Thale cress endoplasmic reticulum 23.77 24.73
CDX97555 Canola extracellular 24.55 24.61
CDY54591 Canola extracellular 24.55 24.55
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 26.36 24.46
AT1G54010.1 Thale cress extracellular 24.29 24.35
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 24.55 24.3
CDX98428 Canola extracellular, plasma membrane, vacuole 24.29 24.23
Bra014372.1-P Field mustard extracellular 24.03 24.22
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 24.03 24.22
Bra027359.1-P Field mustard extracellular 23.51 24.2
CDY36623 Canola endoplasmic reticulum 23.51 23.76
Bra027358.1-P Field mustard extracellular 23.77 23.71
CDX97556 Canola extracellular 23.77 23.71
CDY54588 Canola extracellular 23.26 23.32
Bra030913.1-P Field mustard cytosol 16.8 23.21
CDY54194 Canola cytosol 16.8 23.21
CDY54196 Canola extracellular 23.26 23.14
CDY30676 Canola cytosol 14.99 22.83
CDY54198 Canola cytosol 7.75 22.56
CDY36625 Canola extracellular 7.75 22.06
Bra030912.1-P Field mustard extracellular 23.51 20.45
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0016298GO:GO:0016787GO:GO:0016788InterPro:IPR036514
UniProt:K4C7C8InterPro:Lipase_GDSL_ASPFAM:PF00657ScanProsite:PS01098PANTHER:PTHR22835PANTHER:PTHR22835:SF262
InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266SignalP:SignalP-noTMEnsemblPlantsGene:Solyc06g064990.2EnsemblPlants:Solyc06g064990.2.1
UniParc:UPI00027670F2:::::
Description
No Description!
Coordinates
chr6:+:40529550..40531185
Molecular Weight (calculated)
43463.3 Da
IEP (calculated)
8.329
GRAVY (calculated)
-0.073
Length
387 amino acids
Sequence
(BLAST)
001: MALISSLCIF FLVAHFTTPI VCHKRSHQAA LFVFGDSLFD AGNNNYINTT ASFQANYFPY GESFFKYPTG RNSNGRLIPD FIAEYANLPF IPPYFEIRNK
101: HLVHGVNFAS GGSGCLAETA RGAVMDLKTQ LKLFQNVTQL LRNEVGETES KEILSNAVYI FSTGSNDIFS ALFANSSFPH SDTEYVQMIM GNLTSVLKGI
201: YKEGGRKFVM LNVGPIGCIP TIKAFNFQMG VTNGSCMEEI TNMTKMFNSA LPQMFKKLEK QLRGFKYTIF NFFKVFGDSI DNPTKYGFKI SETACCGTGP
301: FRGILSCGEK RQVKEYELCK NVKDYLFFDA VHPTELAYQQ FAALLWNGTT DVVAPHNLKS FFESSNSRCP SSLQFLLYMK NKQQCEI
Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)
001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP
Arabidopsis Description
GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.