Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G54010.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT1G54010.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 99.22 | 99.22 |
| CDY54591 | Canola | extracellular | 85.45 | 85.01 |
| AT1G54010.1 | Thale cress | extracellular | 83.38 | 83.16 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 82.86 | 83.07 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 81.82 | 80.56 |
| CDY30676 | Canola | cytosol | 52.73 | 79.92 |
| CDY54192 | Canola | extracellular | 27.27 | 78.36 |
| CDY54196 | Canola | extracellular | 77.92 | 77.12 |
| CDY54588 | Canola | extracellular | 76.88 | 76.68 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 68.31 | 67.78 |
| CDX97555 | Canola | extracellular | 67.01 | 66.84 |
| CDX97556 | Canola | extracellular | 67.27 | 66.75 |
| CDY51412 | Canola | cytosol | 64.68 | 65.01 |
| CDY36623 | Canola | endoplasmic reticulum | 64.42 | 64.75 |
| CDY36628 | Canola | cytosol | 62.34 | 62.66 |
| CDY51410 | Canola | mitochondrion, plastid | 21.3 | 58.57 |
| CDY54194 | Canola | cytosol | 41.56 | 57.14 |
| CDY54198 | Canola | cytosol | 17.14 | 49.62 |
| CDY39106 | Canola | vacuole | 42.34 | 45.4 |
| CDY33240 | Canola | vacuole | 42.08 | 45.13 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.58 | 37.95 |
| CDY61480 | Canola | extracellular, vacuole | 37.92 | 37.06 |
| CDY54197 | Canola | extracellular, vacuole | 37.66 | 36.71 |
| CDY30680 | Canola | mitochondrion | 37.66 | 35.89 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 11.17 | 32.82 |
| CDY08214 | Canola | cytosol | 23.38 | 32.61 |
| KRG97291 | Soybean | extracellular | 8.83 | 32.38 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 30.39 | 31.97 |
| CDX98432 | Canola | extracellular | 29.35 | 30.29 |
| CDX97557 | Canola | extracellular | 29.35 | 30.29 |
| KRH13794 | Soybean | nucleus | 28.31 | 29.54 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 28.31 | 29.38 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 27.79 | 29.16 |
| CDX97558 | Canola | extracellular | 28.31 | 29.14 |
| KRH07083 | Soybean | extracellular | 20.78 | 29.09 |
| KRH13793 | Soybean | nucleus | 27.79 | 29.0 |
| KRH47690 | Soybean | extracellular, vacuole | 27.53 | 28.96 |
| KRH69020 | Soybean | extracellular | 26.23 | 28.86 |
| Solyc11g051060.1.1 | Tomato | vacuole | 26.75 | 28.61 |
| CDX98433 | Canola | extracellular, vacuole | 27.79 | 28.61 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 27.01 | 28.57 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 27.53 | 28.57 |
| CDY25680 | Canola | extracellular, plasma membrane | 12.21 | 28.14 |
| KRG94370 | Soybean | extracellular | 26.49 | 27.95 |
| CDY24064 | Canola | plasma membrane | 27.01 | 27.66 |
| CDY02491 | Canola | plastid | 12.21 | 27.65 |
| CDY02490 | Canola | extracellular, vacuole | 26.49 | 27.49 |
| PGSC0003DMT400074599 | Potato | cytosol | 23.64 | 27.49 |
| CDY30674 | Canola | extracellular, vacuole | 26.49 | 27.42 |
| Solyc06g065010.2.1 | Tomato | nucleus | 25.71 | 27.35 |
| CDY36617 | Canola | plasma membrane | 24.16 | 26.88 |
| Solyc06g064960.2.1 | Tomato | extracellular | 25.45 | 26.78 |
| Solyc04g028470.1.1 | Tomato | cytosol | 22.08 | 26.56 |
| KRG97292 | Soybean | extracellular | 25.19 | 26.5 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 25.19 | 26.43 |
| Solyc06g064980.2.1 | Tomato | extracellular | 25.97 | 26.11 |
| PGSC0003DMT400017106 | Potato | extracellular | 24.94 | 25.95 |
| CDY36625 | Canola | extracellular | 9.09 | 25.74 |
| CDY71922 | Canola | extracellular, plasma membrane | 14.81 | 25.68 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 23.9 | 25.41 |
| KRH06260 | Soybean | cytosol, peroxisome | 17.92 | 25.37 |
| PGSC0003DMT400016123 | Potato | cytosol | 5.71 | 25.29 |
| Solyc06g064990.2.1 | Tomato | extracellular | 25.19 | 25.06 |
| CDY69208 | Canola | mitochondrion | 20.0 | 24.68 |
| CDY69407 | Canola | extracellular | 15.84 | 24.3 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 4.42 | 23.94 |
| Solyc01g109020.1.1 | Tomato | extracellular | 11.69 | 23.68 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 21.3 | 22.91 |
| Solyc11g021040.1.1 | Tomato | extracellular | 12.21 | 22.49 |
| Solyc11g051120.1.1 | Tomato | cytosol | 8.05 | 21.38 |
| CDX75755 | Canola | plastid | 20.78 | 18.65 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078GW25 | UniProt:A0A078GW25 | EnsemblPlants:CDY30675 | ProteinID:CDY30675 |
| ProteinID:CDY30675.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | GO:GO:0016788 |
| EnsemblPlantsGene:GSBRNA2T00046001001 | InterPro:IPR036514 | PFAM:PF00657 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF485 | InterPro:SGNH_hydro_sf |
| InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EBD27B | SEG:seg |
Description
BnaC06g10390DBnaC06g10390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GW25]
Coordinates
chrLK032257:-:408992..411053
Molecular Weight (calculated)
42605.6 Da
IEP (calculated)
7.526
GRAVY (calculated)
-0.216
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNSNLVSV LGLLLVLTLI HNPVTVAGQR NSGAALFTFG DSNFDAGNKQ TLTKTNVAQS FWPYGKSRDD PNGKFSDGFI APDFLAKFMG IPIEIPPALV
101: PNVNVSRGAS FAVADATLLG APVESLTLNQ QVRKFNQMKA NWNDDFIKKS AFLIYIGAND YLNFSKNNPN ADASAQQAFV TSVTNKLKND ISLLYSSGAS
201: KFVIQTLAPL GCLPIVRQEY NTGMEKCHEP LNDLAKQHNE KIGPMLNEMA RTTPGFQFTV FDFYDAIIRR TQKPSSYRFF MTNSSCCGIG THDAYGCGLP
301: NVHVRLCEYQ RSYLFFDGRH NTEKAQEMFA HLLIGADKNV IQPMNVRELV VYPVDEPMTE VWVPTTSATV QARESRSSSH GYESY
101: PNVNVSRGAS FAVADATLLG APVESLTLNQ QVRKFNQMKA NWNDDFIKKS AFLIYIGAND YLNFSKNNPN ADASAQQAFV TSVTNKLKND ISLLYSSGAS
201: KFVIQTLAPL GCLPIVRQEY NTGMEKCHEP LNDLAKQHNE KIGPMLNEMA RTTPGFQFTV FDFYDAIIRR TQKPSSYRFF MTNSSCCGIG THDAYGCGLP
301: NVHVRLCEYQ RSYLFFDGRH NTEKAQEMFA HLLIGADKNV IQPMNVRELV VYPVDEPMTE VWVPTTSATV QARESRSSSH GYESY
001: MMAKNCNLVS VLCVFLVLTL FNKPITVAGQ NIPAVGLFTF GDSNFDAGNK QTLTKTLLPQ TFWPYGKSRD DPNGKFSDGL IAPDFLAKFM RIPIVIPPAL
101: QPNVNVSRGA SFAVADATLL GAPVESLTLN QQVRKFNQMK AANWNDDFVK KSVFMIYIGA NDYLNFTKNN PNADASTQQA FVTSVTNKLK NDISLLYSSG
201: ASKFVIQTLA PLGCLPIVRQ EFNTGMDQCY EKLNDLAKQH NEKIGPMLNE LARTAPASAP FQFTVFDFYN AILTRTQRNQ NFRFFVTNAS CCGVGTHDAY
301: GCGFPNVHSR LCEYQRSYLF FDGRHNTEKA QEMFGHLLFG ADTNVIQPMN IRELVVYPAD EPMRESWVPP TSATVQLRES RGYEYY
101: QPNVNVSRGA SFAVADATLL GAPVESLTLN QQVRKFNQMK AANWNDDFVK KSVFMIYIGA NDYLNFTKNN PNADASTQQA FVTSVTNKLK NDISLLYSSG
201: ASKFVIQTLA PLGCLPIVRQ EFNTGMDQCY EKLNDLAKQH NEKIGPMLNE LARTAPASAP FQFTVFDFYN AILTRTQRNQ NFRFFVTNAS CCGVGTHDAY
301: GCGFPNVHSR LCEYQRSYLF FDGRHNTEKA QEMFGHLLFG ADTNVIQPMN IRELVVYPAD EPMRESWVPP TSATVQLRES RGYEYY
Arabidopsis Description
GLL23Inactive GDSL esterase/lipase-like protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4H8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.