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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400013272
PGSC0003DMT400016123
PGSC0003DMT400016126
PGSC0003DMT400017106
PGSC0003DMT400074599
PGSC0003DMT400075691
PGSC0003DMT400080416

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 PGSC0003DMT400075691 AT2G01950.1 19000166
AT1G54030.1 PGSC0003DMT400013272 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400016123 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400016126 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400017106 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400074599 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400080416 AT1G54000.1 23155454
AT1G54030.1 PGSC0003DMT400013272 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400016123 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400016126 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400017106 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400074599 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400080416 AT1G54010.1 23155454
AT1G54030.1 PGSC0003DMT400013272 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400016123 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400016126 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400017106 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400074599 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400080416 AT1G54020.2 23155454
AT1G54030.1 PGSC0003DMT400013272 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400016123 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400016126 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400017106 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400074599 AT3G14210.1 23155454
AT1G54030.1 PGSC0003DMT400080416 AT3G14210.1 23155454
AT3G14220.1 PGSC0003DMT400075691 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g051060.1.1 Tomato vacuole 91.28 93.06
PGSC0003DMT400080416 Potato golgi, vacuole 68.12 69.06
PGSC0003DMT400013272 Potato extracellular, vacuole 64.58 64.58
PGSC0003DMT400016123 Potato cytosol 14.44 60.92
PGSC0003DMT400017106 Potato extracellular 58.31 57.84
KRG97291 Soybean extracellular 15.26 53.33
VIT_09s0002g00530.t01 Wine grape cytosol 49.59 52.91
VIT_09s0002g00510.t01 Wine grape extracellular 52.86 52.57
KRG97292 Soybean extracellular 51.77 51.91
KRG94370 Soybean extracellular 51.23 51.51
VIT_09s0002g00540.t01 Wine grape extracellular 54.77 51.02
Bra039701.1-P Field mustard extracellular, plasma membrane 43.6 49.84
VIT_09s0002g00520.t01 Wine grape extracellular 43.32 49.84
KRH47690 Soybean extracellular, vacuole 49.59 49.73
KRH69020 Soybean extracellular 47.41 49.71
PGSC0003DMT400074252 Potato extracellular 49.86 49.59
KRH13794 Soybean nucleus 49.59 49.32
PGSC0003DMT400074599 Potato cytosol 44.41 49.24
VIT_09s0002g00500.t01 Wine grape cytosol 38.96 49.14
KRH13793 Soybean nucleus 49.32 49.05
KRH07083 Soybean extracellular 36.51 48.73
CDY24064 Canola plasma membrane 49.86 48.67
AT1G53940.2 Thale cress plasma membrane 49.05 47.87
KRH06260 Soybean cytosol, peroxisome 35.42 47.79
Bra030917.1-P Field mustard extracellular, vacuole 48.23 47.71
CDY02490 Canola extracellular, vacuole 48.23 47.71
CDY36617 Canola plasma membrane 44.96 47.69
AT5G40990.1 Thale cress plasma membrane 48.23 47.33
CDX98433 Canola extracellular, vacuole 47.96 47.06
CDY30674 Canola extracellular, vacuole 47.68 47.04
Bra027356.1-P Field mustard extracellular 47.41 46.52
CDX97558 Canola extracellular 47.41 46.52
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 46.32 46.45
CDY36619 Canola endoplasmic reticulum, plasma membrane 46.87 46.36
Bra014375.1-P Field mustard extracellular, vacuole 46.87 46.24
VIT_09s0002g00550.t01 Wine grape extracellular 45.78 46.15
Bra030916.1-P Field mustard plastid 45.5 46.01
VIT_09s0002g00570.t01 Wine grape extracellular 46.32 45.82
AT1G53990.1 Thale cress extracellular, plasma membrane 45.78 45.78
AT3G14225.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 46.32 45.09
CDX98432 Canola extracellular 45.5 44.77
CDX97557 Canola extracellular 45.5 44.77
Bra027357.1-P Field mustard extracellular 45.5 44.77
AT1G53970.2 Thale cress cytosol 11.72 44.33
CDY69407 Canola extracellular 29.97 43.82
CDY69208 Canola mitochondrion 35.97 42.31
CDY71922 Canola extracellular, plasma membrane 22.34 36.94
CDY61480 Canola extracellular, vacuole 32.15 29.95
Bra030911.1-P Field mustard extracellular, vacuole 32.15 29.87
CDY54197 Canola extracellular, vacuole 32.15 29.87
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 31.88 29.7
CDY33240 Canola vacuole 28.88 29.53
Bra021542.1-P Field mustard vacuole 28.61 29.25
CDY39106 Canola vacuole 28.61 29.25
AT3G14220.1 Thale cress vacuole 28.88 29.2
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 28.61 29.09
Bra037957.1-P Field mustard extracellular 29.97 28.72
CDX75755 Canola plastid 33.52 28.67
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 29.97 28.28
Bra030915.1-P Field mustard extracellular 29.7 28.24
AT1G54020.2 Thale cress endoplasmic reticulum 28.61 28.23
CDY36628 Canola cytosol 29.43 28.2
CDY08211 Canola endoplasmic reticulum, vacuole 29.16 27.79
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 29.16 27.79
CDY30675 Canola endoplasmic reticulum, vacuole 29.16 27.79
CDY30680 Canola mitochondrion 30.52 27.72
CDY51412 Canola cytosol 28.88 27.68
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 28.88 27.68
CDY54591 Canola extracellular 29.16 27.65
CDY54192 Canola extracellular 10.08 27.61
AT3G14210.1 Thale cress extracellular, golgi 29.43 27.55
CDY08214 Canola cytosol 20.71 27.54
CDY30676 Canola cytosol 18.8 27.17
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 28.34 27.08
Bra014372.1-P Field mustard extracellular 28.34 27.08
CDY54588 Canola extracellular 28.34 26.94
AT1G54010.1 Thale cress extracellular 28.34 26.94
CDY54196 Canola extracellular 28.34 26.74
CDY36623 Canola endoplasmic reticulum 27.79 26.63
Bra027359.1-P Field mustard extracellular 27.25 26.6
CDX98428 Canola extracellular, plasma membrane, vacuole 28.07 26.55
CDY36625 Canola extracellular 9.81 26.47
CDY51410 Canola mitochondrion, plastid 10.08 26.43
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 28.07 26.34
CDX97556 Canola extracellular 27.79 26.29
Bra027358.1-P Field mustard extracellular 27.79 26.29
CDX97555 Canola extracellular 27.52 26.17
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 29.43 25.9
CDY54194 Canola cytosol 18.53 24.29
Bra030913.1-P Field mustard cytosol 18.53 24.29
PGSC0003DMT400096676 Potato mitochondrion 26.98 23.46
Bra030912.1-P Field mustard extracellular 28.34 23.37
CDY54198 Canola cytosol 7.9 21.8
Protein Annotations
EnsemblPlants:PGSC0003DMT400016126EnsemblPlantsGene:PGSC0003DMG400006303Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF262PFAM:PF00657PGSC:PGSC0003DMG400006303SEG:segSUPFAM:SSF52266TMHMM:TMhelix
UniParc:UPI000295918FUniProt:M1A754MapMan:35.1:::
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006303]
Coordinates
chr11:-:15344630..15347016
Molecular Weight (calculated)
41302.0 Da
IEP (calculated)
9.762
GRAVY (calculated)
-0.146
Length
367 amino acids
Sequence
(BLAST)
001: MGLIILIIWF SLIIGIPFGC FGSYERTLLS VQKQKALFVF GDSLFDPGNN NYINTTTQFQ ANWSPYGESF FNPPTGRFCD GRIIPDFIAE YAELPLVPSY
101: FEIGKDHFVH GVNFASGGAG CLVETFRGFV IDLKTQLKYF KKVTKDLKNK FGRKKSKQLL SNAVYIFSAG NNDYFNFDAT YPKHEYANMV IGNLTSVIKG
201: IYKEGGRKFV ILSLGPLGCT PGSRALNFQQ GNKSGNCIQQ LTTLAKIHNS ALPKMLKQLE QKLPGFKYSL FDFFKVASER INNPSKYGFK TSKTACCGTG
301: PFRGIYSCGG KRQVKEYKLC KNVKDYLFFD SGHLTEMVYK QVAELLWNGT VDVIQPYNLK SFFHLPA
Best Arabidopsis Sequence Match ( AT1G53940.2 )
(BLAST)
001: MENSRSTLII FFAYTTIILI GSINCRDNNN NNLVTNQSAL FVFGDSVFDA GNNNYIDTLP SFRSNYWPYG QTTFKFPTGR VSDGRTIPDF IAEYAWLPLI
101: PAYLQPSNGK NQFPYGVSFA SAGAGALVGT FPGMVINLKS QLNNFKKVEK LLRSTLGEAQ GKMVISRAVY LFHIGVNDYQ YPFSTNSSIF QSSPQEIYVD
201: FVVGNTTAVI KEVYKIGGRK FGFLNMGAYD CAPASLIIDQ TKIGTCFKPV TELINLHNEK LESGLRRLER ELSGFKYALH DYHTSLSVRM NNPSKYGFKE
301: GKMACCGTGP LRGINTCGGR MGVSQSYELC EKVTDYLFFD HFHLTEKAHQ QIAELIWSGP TNVTKPYNLQ ALFELN
Arabidopsis Description
GLIP2GDSL esterase/lipase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.