Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98432 | Canola | extracellular | 83.02 | 83.91 |
| CDX97557 | Canola | extracellular | 83.02 | 83.91 |
| Bra027357.1-P | Field mustard | extracellular | 83.02 | 83.91 |
| AT1G53990.1 | Thale cress | extracellular, plasma membrane | 67.37 | 69.21 |
| AT5G40990.1 | Thale cress | plasma membrane | 64.99 | 65.51 |
| AT1G53940.2 | Thale cress | plasma membrane | 65.25 | 65.43 |
| AT1G53970.2 | Thale cress | cytosol | 15.12 | 58.76 |
| CDX75755 | Canola | plastid | 57.56 | 50.58 |
| PGSC0003DMT400016123 | Potato | cytosol | 10.88 | 47.13 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 45.09 | 46.32 |
| Solyc11g051060.1.1 | Tomato | vacuole | 43.5 | 45.56 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 41.91 | 43.65 |
| Solyc06g065010.2.1 | Tomato | nucleus | 41.38 | 43.09 |
| AT1G53920.1 | Thale cress | cytosol | 43.5 | 42.6 |
| Solyc06g064960.2.1 | Tomato | extracellular | 41.11 | 42.35 |
| Solyc01g109020.1.1 | Tomato | extracellular | 21.22 | 42.11 |
| Solyc11g021040.1.1 | Tomato | extracellular | 23.34 | 42.11 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 40.85 | 41.96 |
| Solyc06g064990.2.1 | Tomato | extracellular | 42.18 | 41.09 |
| Solyc06g064980.2.1 | Tomato | extracellular | 41.64 | 40.99 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 7.69 | 40.85 |
| PGSC0003DMT400017106 | Potato | extracellular | 39.79 | 40.54 |
| PGSC0003DMT400074599 | Potato | cytosol | 33.16 | 37.76 |
| Solyc04g028470.1.1 | Tomato | cytosol | 30.77 | 36.25 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 31.83 | 33.52 |
| AT3G14220.1 | Thale cress | vacuole | 29.18 | 30.3 |
| Solyc11g051120.1.1 | Tomato | cytosol | 11.41 | 29.66 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 28.38 | 28.76 |
| AT1G71120.1 | Thale cress | endoplasmic reticulum | 27.59 | 28.73 |
| AT1G54010.1 | Thale cress | extracellular | 27.85 | 27.2 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 27.85 | 26.79 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 29.18 | 26.38 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 27.06 | 26.09 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:820641 | ProteinID:AEE75489.1 | ArrayExpress:AT3G14225 | EnsemblPlantsGene:AT3G14225 |
| RefSeq:AT3G14225 | TAIR:AT3G14225 | RefSeq:AT3G14225-TAIR-G | EnsemblPlants:AT3G14225.1 | TAIR:AT3G14225.1 | Unigene:At.53307 |
| ProteinID:BAB01436.1 | InterPro:GDSL | Symbol:GLIP4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 |
| GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | InterPro:Lipase_GDSL_AS | RefSeq:NP_001325624.1 |
| RefSeq:NP_188039.1 | PFAM:PF00657 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001081 | PO:PO:0007064 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | ScanProsite:PS01098 | PFscan:PS51257 |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF301 | UniProt:Q9LJP1 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00001633C7 | SEG:seg | : | : |
Description
GLIP4GDSL esterase/lipase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJP1]
Coordinates
chr3:-:4734616..4735993
Molecular Weight (calculated)
42031.0 Da
IEP (calculated)
8.530
GRAVY (calculated)
-0.128
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPRFNSII IILFICTISL SIVSISCKED LKTNQAALFA FGDSLFEAGN NNYFDSISSF RSNFWPYGKT TFKFPTGRVS DGRIMIDFIA EYAWLPLIPP
101: NLQPGYSNSQ LTYGLNFATT AAGVFAGTFP GSVTNLSKDL GTQLNNFKNV EKTLRSNLGD AEARRVISKA VYLFHIGAND YQYPFFANTS TFSNTTKERF
201: IDFVIGNTTT VIEELYKLGA RKFGFLSLGP FGCTPSALII NSTKIGSCFE PVTELINLHN QEFPKVLRRL ERRLSGFKYA LHDFHTSLSQ RINNPSRYGF
301: KEGEMACCGS GPLRGINTCG FRNGPSQGYK LCENADDYVF FDPSHLTETA HQQIAELIWS GPPNVTAPYN LKTLFRL
101: NLQPGYSNSQ LTYGLNFATT AAGVFAGTFP GSVTNLSKDL GTQLNNFKNV EKTLRSNLGD AEARRVISKA VYLFHIGAND YQYPFFANTS TFSNTTKERF
201: IDFVIGNTTT VIEELYKLGA RKFGFLSLGP FGCTPSALII NSTKIGSCFE PVTELINLHN QEFPKVLRRL ERRLSGFKYA LHDFHTSLSQ RINNPSRYGF
301: KEGEMACCGS GPLRGINTCG FRNGPSQGYK LCENADDYVF FDPSHLTETA HQQIAELIWS GPPNVTAPYN LKTLFRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.