Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030918.1-P | Field mustard | plastid | 65.45 | 81.03 |
| CDY25680 | Canola | extracellular, plasma membrane | 34.81 | 80.24 |
| CDY02491 | Canola | plastid | 34.55 | 78.24 |
| VIT_09s0002g00490.t01 | Wine grape | vacuole | 58.7 | 59.95 |
| Solyc12g049550.1.1 | Tomato | extracellular | 52.73 | 55.62 |
| PGSC0003DMT400074252 | Potato | extracellular | 52.73 | 55.01 |
| KRH47692 | Soybean | extracellular, vacuole | 53.25 | 54.52 |
| KRH06261 | Soybean | extracellular, vacuole | 52.21 | 53.46 |
| AT1G53970.2 | Thale cress | cytosol | 12.47 | 49.48 |
| AT5G40990.1 | Thale cress | plasma membrane | 47.79 | 49.2 |
| AT1G53940.2 | Thale cress | plasma membrane | 47.27 | 48.4 |
| AT1G53990.1 | Thale cress | extracellular, plasma membrane | 44.94 | 47.14 |
| AT3G14225.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 42.6 | 43.5 |
| AT1G71120.1 | Thale cress | endoplasmic reticulum | 29.61 | 31.49 |
| AT3G14220.1 | Thale cress | vacuole | 26.75 | 28.37 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 30.65 | 28.3 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 26.23 | 27.15 |
| AT1G54010.1 | Thale cress | extracellular | 27.01 | 26.94 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 26.75 | 26.34 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 26.23 | 25.77 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:841830 | UniProt:A0A178WKF5 | ProteinID:AAF02864.1 | ProteinID:AEE33025.1 |
| ArrayExpress:AT1G53920 | EnsemblPlantsGene:AT1G53920 | RefSeq:AT1G53920 | TAIR:AT1G53920 | RefSeq:AT1G53920-TAIR-G | EnsemblPlants:AT1G53920.1 |
| TAIR:AT1G53920.1 | InterPro:GDSL | Symbol:GLIP5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 |
| GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 | RefSeq:NP_175795.2 | ProteinID:OAP17612.1 |
| PFAM:PF00657 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020003 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF461 | UniProt:Q9SSA7 | InterPro:SGNH_hydro_sf |
| InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | TMHMM:TMhelix | UniParc:UPI000019709B | SEG:seg | : |
Description
GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
Coordinates
chr1:+:20137537..20139716
Molecular Weight (calculated)
43460.1 Da
IEP (calculated)
9.635
GRAVY (calculated)
-0.212
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.