Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 5
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037954.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 76.88 | 74.67 |
| CDY51412 | Canola | cytosol | 76.88 | 74.67 |
| CDY36623 | Canola | endoplasmic reticulum | 75.27 | 73.11 |
| Bra037957.1-P | Field mustard | extracellular | 73.66 | 71.54 |
| CDY36628 | Canola | cytosol | 73.39 | 71.28 |
| AT1G54010.1 | Thale cress | extracellular | 72.04 | 69.43 |
| CDY54194 | Canola | cytosol | 52.15 | 69.29 |
| Bra030913.1-P | Field mustard | cytosol | 52.15 | 69.29 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 70.16 | 66.75 |
| CDY51410 | Canola | mitochondrion, plastid | 25.0 | 66.43 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 68.55 | 65.05 |
| CDY54198 | Canola | cytosol | 20.7 | 57.89 |
| AT3G14220.1 | Thale cress | vacuole | 41.94 | 42.98 |
| AT1G53970.2 | Thale cress | cytosol | 8.87 | 34.02 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 35.75 | 31.89 |
| KRG97291 | Soybean | extracellular | 8.6 | 30.48 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 29.03 | 29.67 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 29.03 | 29.51 |
| Solyc11g051060.1.1 | Tomato | vacuole | 27.69 | 28.61 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 28.23 | 28.61 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 28.49 | 28.57 |
| KRH13794 | Soybean | nucleus | 28.23 | 28.46 |
| AT3G14225.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 28.76 | 28.38 |
| KRH13793 | Soybean | nucleus | 27.96 | 28.18 |
| KRH07083 | Soybean | extracellular | 20.7 | 28.0 |
| AT5G40990.1 | Thale cress | plasma membrane | 27.69 | 27.54 |
| KRH47690 | Soybean | extracellular, vacuole | 26.88 | 27.32 |
| AT1G53940.2 | Thale cress | plasma membrane | 27.42 | 27.13 |
| Solyc06g065010.2.1 | Tomato | nucleus | 26.08 | 26.8 |
| KRH69020 | Soybean | extracellular | 25.0 | 26.57 |
| PGSC0003DMT400016123 | Potato | cytosol | 6.18 | 26.44 |
| KRG94370 | Soybean | extracellular | 25.81 | 26.3 |
| AT1G53920.1 | Thale cress | cytosol | 27.15 | 26.23 |
| AT1G53990.1 | Thale cress | extracellular, plasma membrane | 25.81 | 26.16 |
| PGSC0003DMT400074599 | Potato | cytosol | 23.12 | 25.98 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 25.0 | 25.69 |
| AT1G71120.1 | Thale cress | endoplasmic reticulum | 25.0 | 25.69 |
| KRG97292 | Soybean | extracellular | 25.27 | 25.68 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 4.84 | 25.35 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 25.0 | 25.34 |
| Solyc06g064980.2.1 | Tomato | extracellular | 26.08 | 25.33 |
| Solyc06g064960.2.1 | Tomato | extracellular | 24.73 | 25.14 |
| PGSC0003DMT400017106 | Potato | extracellular | 24.73 | 24.86 |
| KRH06260 | Soybean | cytosol, peroxisome | 17.74 | 24.26 |
| Solyc01g109020.1.1 | Tomato | extracellular | 12.37 | 24.21 |
| Solyc06g064990.2.1 | Tomato | extracellular | 24.73 | 23.77 |
| Solyc04g028470.1.1 | Tomato | cytosol | 20.43 | 23.75 |
| Solyc11g021040.1.1 | Tomato | extracellular | 12.63 | 22.49 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 21.24 | 22.07 |
| Solyc11g051120.1.1 | Tomato | cytosol | 7.8 | 20.0 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:841840 | ProteinID:AAD25774.1 | ProteinID:AEE33035.1 | ProteinID:AEE33036.1 |
| ProteinID:AEE33037.1 | EMBL:AF348585 | ProteinID:ANM58998.1 | ArrayExpress:AT1G54020 | EnsemblPlantsGene:AT1G54020 | RefSeq:AT1G54020 |
| TAIR:AT1G54020 | RefSeq:AT1G54020-TAIR-G | EnsemblPlants:AT1G54020.2 | TAIR:AT1G54020.2 | EMBL:AY054258 | EMBL:AY132004 |
| Unigene:At.20006 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 |
| RefSeq:NP_001077719.1 | RefSeq:NP_001319222.1 | RefSeq:NP_175804.1 | RefSeq:NP_849805.1 | PFAM:PF00657 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF485 | UniProt:Q9C5N8 | InterPro:SGNH_hydro_sf |
| InterPro:SGNH_plant_lipase_like | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000009D8AF | : | : |
Description
GDSL esterase/lipase At1g54020 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5N8]
Coordinates
chr1:-:20161555..20163750
Molecular Weight (calculated)
41803.1 Da
IEP (calculated)
8.049
GRAVY (calculated)
-0.218
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MECSSVSVLG ILLVFPLLHN LVTISGQNLP AVGLFTFGDS NFDAGNKKFL TSAPLPQNFW PYGKSRDDPK GKFSDGKIVP DFIAKFMGIP HDLPPALKPG
101: TDVSRGASFA VGSASILGSP KDSLALNQQV RKFNQMISNW KVDYIQKSVF MISIGMEDYY NFTKNNPNAE VSAQQAFVTS VTNRFKSDIN LLYSSGASKF
201: VVHLLAPLGC LPIARQEFKT GNNCYEKLND LAKQHNAKIG PILNEMAETK PDFQFTVFDF YNVILRRTQR NMNYRFSVTN ISCCGVGTHY AYGCGLPNVH
301: SKLCEYQRSY LYFDARHNTE KAQEAFAHLI FGADPNVIQP MNVRELMVYP VNEPMREFWE DPMDEKLSLV QY
101: TDVSRGASFA VGSASILGSP KDSLALNQQV RKFNQMISNW KVDYIQKSVF MISIGMEDYY NFTKNNPNAE VSAQQAFVTS VTNRFKSDIN LLYSSGASKF
201: VVHLLAPLGC LPIARQEFKT GNNCYEKLND LAKQHNAKIG PILNEMAETK PDFQFTVFDF YNVILRRTQR NMNYRFSVTN ISCCGVGTHY AYGCGLPNVH
301: SKLCEYQRSY LYFDARHNTE KAQEAFAHLI FGADPNVIQP MNVRELMVYP VNEPMREFWE DPMDEKLSLV QY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.