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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g081170.1.1
Solyc01g109020.1.1
Solyc04g008430.1.1
Solyc04g028470.1.1
Solyc06g064960.2.1
Solyc06g064970.2.1
Solyc06g064980.2.1
Solyc06g064990.2.1
Solyc06g065010.2.1
Solyc11g021040.1.1
Solyc11g051060.1.1
Solyc11g051100.1.1
Solyc11g051120.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 Solyc04g008430.1.1 AT2G01950.1 19000166
AT1G54030.1 Solyc01g081170.1.1 AT1G52400.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54000.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54010.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc04g028470.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064960.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064970.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064980.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g064990.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc06g065010.2.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g021040.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051060.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051100.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc11g051120.1.1 AT1G54020.2 23155454
AT1G54030.1 Solyc01g081170.1.1 AT3G09260.1 23155454
AT1G54030.1 Solyc01g109020.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc04g028470.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064960.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064970.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064980.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g064990.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc06g065010.2.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g021040.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051060.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051100.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc11g051120.1.1 AT3G14210.1 23155454
AT1G54030.1 Solyc01g081170.1.1 AT3G21370.1 23155454
AT3G14220.1 Solyc04g008430.1.1 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g064990.2.1 Tomato extracellular 81.72 80.88
Solyc06g064960.2.1 Tomato extracellular 76.24 79.78
Solyc01g109020.1.1 Tomato extracellular 37.34 75.26
Solyc11g021040.1.1 Tomato extracellular 39.16 71.77
Solyc06g065010.2.1 Tomato nucleus 63.19 66.85
Solyc06g064970.2.1 Tomato extracellular, vacuole 59.53 63.69
Solyc11g051060.1.1 Tomato vacuole 56.4 60.0
Solyc11g051100.1.1 Tomato cytosol, extracellular 10.71 57.75
KRG97291 Soybean extracellular 15.14 55.24
VIT_09s0002g00530.t01 Wine grape cytosol 45.95 51.16
VIT_09s0002g00510.t01 Wine grape extracellular 49.09 50.95
KRH69020 Soybean extracellular 46.48 50.86
KRG97292 Soybean extracellular 47.52 49.73
KRG94370 Soybean extracellular 47.26 49.59
Solyc12g049550.1.1 Tomato extracellular 45.43 47.67
CDY02490 Canola extracellular, vacuole 45.95 47.44
Bra030917.1-P Field mustard extracellular, vacuole 45.95 47.44
VIT_09s0002g00500.t01 Wine grape cytosol 36.03 47.42
AT1G53970.2 Thale cress cytosol 12.01 47.42
KRH07083 Soybean extracellular 33.94 47.27
VIT_09s0002g00550.t01 Wine grape extracellular 44.91 47.25
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 44.91 46.99
VIT_09s0002g00520.t01 Wine grape extracellular 38.9 46.71
VIT_09s0002g00540.t01 Wine grape extracellular 48.04 46.7
KRH13794 Soybean nucleus 44.39 46.07
KRH13793 Soybean nucleus 43.6 45.26
KRH47690 Soybean extracellular, vacuole 43.08 45.08
Bra039701.1-P Field mustard extracellular, plasma membrane 37.34 44.55
CDY24064 Canola plasma membrane 43.6 44.41
Bra027356.1-P Field mustard extracellular 43.34 44.38
CDX98433 Canola extracellular, vacuole 43.34 44.38
CDX97558 Canola extracellular 43.34 44.38
CDY30674 Canola extracellular, vacuole 42.82 44.09
AT5G40990.1 Thale cress plasma membrane 42.82 43.85
VIT_09s0002g00570.t01 Wine grape extracellular 42.3 43.67
CDY36617 Canola plasma membrane 39.43 43.64
Bra014375.1-P Field mustard extracellular, vacuole 42.3 43.55
CDY36619 Canola endoplasmic reticulum, plasma membrane 42.04 43.4
KRH06260 Soybean cytosol, peroxisome 30.81 43.38
Bra030916.1-P Field mustard plastid 40.99 43.25
AT1G53940.2 Thale cress plasma membrane 42.3 43.09
Solyc04g028470.1.1 Tomato cytosol 35.51 42.5
AT3G14225.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 40.99 41.64
AT1G53990.1 Thale cress extracellular, plasma membrane 39.16 40.87
CDX98432 Canola extracellular 39.69 40.75
CDX97557 Canola extracellular 39.43 40.48
CDY69407 Canola extracellular 26.37 40.24
Bra027357.1-P Field mustard extracellular 39.16 40.21
CDY69208 Canola mitochondrion 30.81 37.82
CDY71922 Canola extracellular, plasma membrane 20.89 36.04
Solyc11g051120.1.1 Tomato cytosol 13.58 35.86
Solyc04g007570.1.1 Tomato extracellular, plasma membrane, vacuole 29.77 31.23
CDY54192 Canola extracellular 10.18 29.1
CDY33240 Canola vacuole 26.63 28.41
AT3G14220.1 Thale cress vacuole 26.89 28.37
CDY39106 Canola vacuole 26.37 28.13
Bra021542.1-P Field mustard vacuole 26.37 28.13
CDX75755 Canola plastid 31.33 27.97
CDY61480 Canola extracellular, vacuole 28.46 27.66
Bra030911.1-P Field mustard extracellular, vacuole 28.46 27.59
CDY54197 Canola extracellular, vacuole 28.46 27.59
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 27.94 27.51
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 27.94 27.16
Bra037957.1-P Field mustard extracellular 27.15 27.15
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 25.33 26.87
CDY51412 Canola cytosol 26.63 26.63
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 26.63 26.63
CDY36628 Canola cytosol 26.37 26.37
Bra030915.1-P Field mustard extracellular 26.37 26.17
CDX97555 Canola extracellular 26.37 26.17
CDY08214 Canola cytosol 18.8 26.09
AT1G54020.2 Thale cress endoplasmic reticulum 25.33 26.08
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 26.11 26.04
AT3G14210.1 Thale cress extracellular, golgi 26.63 26.02
CDY30675 Canola endoplasmic reticulum, vacuole 26.11 25.97
Bra027359.1-P Field mustard extracellular 25.33 25.8
Bra014372.1-P Field mustard extracellular 25.85 25.78
CDX98428 Canola extracellular, plasma membrane, vacuole 26.11 25.77
CDY30680 Canola mitochondrion 27.15 25.74
CDY51410 Canola mitochondrion, plastid 9.4 25.71
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 25.85 25.71
CDY08211 Canola endoplasmic reticulum, vacuole 25.85 25.71
CDY54591 Canola extracellular 25.85 25.58
CDY36623 Canola endoplasmic reticulum 25.33 25.33
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 25.85 25.32
CDX97556 Canola extracellular 25.59 25.26
Bra027358.1-P Field mustard extracellular 25.59 25.26
AT1G54010.1 Thale cress extracellular 25.33 25.13
CDY54588 Canola extracellular 24.8 24.61
CDY54196 Canola extracellular 24.8 24.42
CDY30676 Canola cytosol 16.19 24.41
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 25.59 23.5
Bra030913.1-P Field mustard cytosol 16.97 23.21
CDY54194 Canola cytosol 16.97 23.21
CDY36625 Canola extracellular 7.83 22.06
Bra030912.1-P Field mustard extracellular 25.07 21.57
CDY54198 Canola cytosol 7.05 20.3
Protein Annotations
EnsemblPlants:Solyc06g064980.2.1EnsemblPlantsGene:Solyc06g064980.2Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likencoils:Coil
PANTHER:PTHR22835PANTHER:PTHR22835:SF262PFAM:PF00657SignalP:SignalP-noTMSUPFAM:SSF52266UniParc:UPI00027670F1
UniProt:K4C7C7MapMan:35.1::::
Description
No Description!
Coordinates
chr6:+:40524850..40526562
Molecular Weight (calculated)
42614.7 Da
IEP (calculated)
9.357
GRAVY (calculated)
-0.045
Length
383 amino acids
Sequence
(BLAST)
001: MALISSLCIF VLVTHFATPI VCHERAALFV FGDSVFDSGN NKYINATADL QGSNYFPYGE SFFKHPTGRV SNGRLIPDFI AEYANLPFIP PYFEIGKKQL
101: IHGVNFASAG SGCLAETSGA IVLKTQLKNF ENVIQLLKRK MGKTESHKIL ANAVYIFSTG SNDMFASLVP NSTFPYSDRE YLQMIMGNLT SVLKGVYKGG
201: GRKFVMLNLG PLGCLPSTRV LNLRIGVKNG SCLEEATNKA KMFNSALPKM LKQLEKQLPG FKYTIFNFFK VFADSIHNPT KYGFKISETA CCGTGPFRGI
301: LSCGGKRQVK EYELCKNVKD YLFFDSVHPS ELAYQQYAAL LWNGTTDVVA PHNLKSFFES SNSRCPSSLQ FLLYMKNKQQ CEI
Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)
001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP
Arabidopsis Description
GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.