Factsheet for Solyc12g049550.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074252	Potato	extracellular	93.15	92.14
VIT_09s0002g00490.t01	Wine grape	vacuole	60.82	58.89
KRH06261	Soybean	extracellular, vacuole	56.44	54.79
KRH47692	Soybean	extracellular, vacuole	56.44	54.79
AT1G53920.1	Thale cress	cytosol	55.62	52.73
Bra030918.1-P	Field mustard	plastid	43.29	50.8
CDY25680	Canola	extracellular, plasma membrane	23.01	50.3
Solyc01g109020.1.1	Tomato	extracellular	26.03	50.0
CDY02491	Canola	plastid	23.29	50.0
Solyc11g021040.1.1	Tomato	extracellular	28.49	49.76
Solyc11g051060.1.1	Tomato	vacuole	49.04	49.72
Solyc06g065010.2.1	Tomato	nucleus	49.04	49.45
Solyc06g064960.2.1	Tomato	extracellular	47.4	47.27
Solyc11g051100.1.1	Tomato	cytosol, extracellular	9.04	46.48
Solyc06g064980.2.1	Tomato	extracellular	47.67	45.43
Solyc06g064990.2.1	Tomato	extracellular	47.12	44.44
Solyc04g028470.1.1	Tomato	cytosol	37.53	42.81
Solyc06g064970.2.1	Tomato	extracellular, vacuole	36.99	37.71
Solyc11g051120.1.1	Tomato	cytosol	12.88	32.41
Solyc04g007570.1.1	Tomato	extracellular, plasma membrane, vacuole	31.23	31.23

Protein Annotations

EnsemblPlants:Solyc12g049550.1.1	EnsemblPlantsGene:Solyc12g049550.1	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF461	PFAM:PF00657	PFscan:PS51257	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
TMHMM:TMhelix	UniParc:UPI0002769B7C	UniProt:K4DFN5	MapMan:35.1	:	:

Description

GDSL esterase/lipase 5 [Source:Projected from Arabidopsis thaliana (AT1G53920) UniProtKB/Swiss-Prot;Acc:Q9SSA7]

Coordinates

chr12:+:36684736..36691278

Molecular Weight (calculated)

41010.7 Da

IEP (calculated)

9.875

GRAVY (calculated)

-0.219

Length

365 amino acids

Sequence
(BLAST)

001: MSKPLGTSNF TLVLLIIACC FHIPIVECKC QKTKEKASLF IFGDSFFDVG NNNYINTTTL DQANFKPYGE TYFKFPTGRF SDGRLISDLI AEYAKLPLLP
101: PFLQPGSQHT YYNGANFASA GAGSLVTTFQ GFVIDMETQL KNFKKVKSWL RNKLGKGKSQ NILSNAVYLF SIGSNDYLSL FVTNSSIPIS PQYQQMVVGN
201: LTTIVNEIYK IGGRKFGFLN LGDLGCLPGL RMLNSSNKNG CLEKASNMAK LHNVELYNTL FKLKKKLKGF KYSLYDFNSS LRKRIDHPSK YGLKEGKIAC
301: CGIGRFRGIH SCGGKRPVGH KFELCQNPNM HVFWDSYHLT ETTYHQMAAE MWNGPSTFKS LFRCS

Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)

001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP

Arabidopsis Description

GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.