Factsheet for Bra030918.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
extracellular 3
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02491	Canola	plastid	49.2	90.0
CDY25680	Canola	extracellular, plasma membrane	47.91	89.22
AT1G53920.1	Thale cress	cytosol	81.03	65.45
VIT_09s0002g00490.t01	Wine grape	vacuole	56.27	46.42
Solyc12g049550.1.1	Tomato	extracellular	50.8	43.29
PGSC0003DMT400074252	Potato	extracellular	51.13	43.09
KRH06261	Soybean	extracellular, vacuole	49.52	40.96
KRH47692	Soybean	extracellular, vacuole	49.2	40.69
Bra030917.1-P	Field mustard	extracellular, vacuole	45.98	38.54
Bra027356.1-P	Field mustard	extracellular	44.69	37.17
Bra014375.1-P	Field mustard	extracellular, vacuole	43.73	36.56
Bra030916.1-P	Field mustard	plastid	41.16	35.26
Bra039701.1-P	Field mustard	extracellular, plasma membrane	36.33	35.2
Bra027357.1-P	Field mustard	extracellular	36.66	30.56
Bra007962.1-P	Field mustard	extracellular, vacuole	27.01	23.73
Bra030911.1-P	Field mustard	extracellular, vacuole	28.94	22.78
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	28.3	22.34
Bra037957.1-P	Field mustard	extracellular	26.05	21.15
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.05	20.82
Bra021542.1-P	Field mustard	vacuole	23.47	20.33
Bra027359.1-P	Field mustard	extracellular	24.12	19.95
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	24.12	19.48
Bra030915.1-P	Field mustard	extracellular	23.47	18.91
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	23.15	18.8
Bra027358.1-P	Field mustard	extracellular	23.15	18.56
Bra014372.1-P	Field mustard	extracellular	22.83	18.49
Bra030912.1-P	Field mustard	extracellular	23.15	16.18
Bra030913.1-P	Field mustard	cytosol	13.83	15.36

Protein Annotations

EnsemblPlants:Bra030918.1	EnsemblPlants:Bra030918.1-P	EnsemblPlantsGene:Bra030918	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016788	InterPro:GDSL
InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835	PANTHER:PTHR22835:SF461	PFAM:PF00657
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002545624	UniProt:M4EQ47	MapMan:35.1	:

Description

AT1G53920 (E=3e-126) GLIP5 | GLIP5; carboxylesterase/ lipase

Coordinates

chrA08:-:779302..781380

Molecular Weight (calculated)

34443.3 Da

IEP (calculated)

9.704

GRAVY (calculated)

-0.121

Length

311 amino acids

Sequence
(BLAST)

001: MRKSTLMEKV TQRTISSSSS TTFFLCFFIF SSSILFLAGK SAAKVSYDGD NDDNVTALFI FGDSFLDAGN NNYINTTTLD QANFPPYGQT FFGLPTGRFS
101: DGRLISDFIA EYAKLPLIPP FLEPGDSQKK LCGVNFASAG AGALVETFQG SVISLRTQLD HYKKVERLWR IKFGKEESKK RISRAVYLIS IGSNDYSSPF
201: LTNQSLSVSM SQHVDIVIGN LTTFIHEIYK IGGRKFGFLN VPDLGCFPAL RILKQKNDSC LRDASILASI HNKALSNLLF KMQRQVLKKG KKHVVGQGSG
301: EEYSAVEGRE L

Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)

001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP

Arabidopsis Description

GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.