Factsheet for Bra037954.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51412	Canola	cytosol	99.74	99.74
CDY36623	Canola	endoplasmic reticulum	94.52	94.52
Bra037957.1-P	Field mustard	extracellular	81.72	81.72
AT1G54020.2	Thale cress	endoplasmic reticulum	74.67	76.88
Bra030913.1-P	Field mustard	cytosol	52.22	71.43
Bra014372.1-P	Field mustard	extracellular	69.97	69.79
Bra030915.1-P	Field mustard	extracellular	68.67	68.13
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	64.75	64.42
Bra027359.1-P	Field mustard	extracellular	63.19	64.36
Bra027358.1-P	Field mustard	extracellular	64.23	63.4
Bra030912.1-P	Field mustard	extracellular	65.01	55.96
Bra021542.1-P	Field mustard	vacuole	41.78	44.57
Bra030911.1-P	Field mustard	extracellular, vacuole	34.46	33.42
KRG97291	Soybean	extracellular	9.14	33.33
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	33.16	32.65
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	33.16	32.23
VIT_09s0002g00550.t01	Wine grape	extracellular	28.46	29.95
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	28.46	29.78
KRH07083	Soybean	extracellular	20.89	29.09
Solyc11g051060.1.1	Tomato	vacuole	27.15	28.89
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	27.68	28.88
VIT_09s0002g00570.t01	Wine grape	extracellular	27.68	28.57
Bra027357.1-P	Field mustard	extracellular	27.68	28.42
KRH69020	Soybean	extracellular	25.85	28.29
Solyc11g051100.1.1	Tomato	cytosol, extracellular	5.22	28.17
KRH13794	Soybean	nucleus	26.89	27.91
PGSC0003DMT400016123	Potato	cytosol	6.27	27.59
KRG94370	Soybean	extracellular	26.11	27.4
KRH13793	Soybean	nucleus	26.37	27.37
Solyc06g065010.2.1	Tomato	nucleus	25.85	27.35
Bra027356.1-P	Field mustard	extracellular	26.63	27.27
Bra030917.1-P	Field mustard	extracellular, vacuole	26.37	27.22
Bra007962.1-P	Field mustard	extracellular, vacuole	24.8	26.84
Bra039701.1-P	Field mustard	extracellular, plasma membrane	22.45	26.79
KRH47690	Soybean	extracellular, vacuole	25.59	26.78
KRG97292	Soybean	extracellular	25.59	26.78
PGSC0003DMT400017106	Potato	extracellular	25.85	26.76
Bra030916.1-P	Field mustard	plastid	25.33	26.72
Solyc06g064980.2.1	Tomato	extracellular	26.63	26.63
PGSC0003DMT400013272	Potato	extracellular, vacuole	25.33	26.43
Solyc06g064960.2.1	Tomato	extracellular	25.07	26.23
PGSC0003DMT400080416	Potato	golgi, vacuole	24.28	25.69
PGSC0003DMT400074599	Potato	cytosol	21.93	25.38
Bra014375.1-P	Field mustard	extracellular, vacuole	24.54	25.27
Solyc01g109020.1.1	Tomato	extracellular	12.27	24.74
Solyc06g064990.2.1	Tomato	extracellular	24.8	24.55
Solyc04g028470.1.1	Tomato	cytosol	19.84	23.75
Bra030918.1-P	Field mustard	plastid	18.8	23.15
Solyc11g021040.1.1	Tomato	extracellular	12.53	22.97
Solyc06g064970.2.1	Tomato	extracellular, vacuole	21.15	22.63
KRH06260	Soybean	cytosol, peroxisome	15.67	22.06
Solyc11g051120.1.1	Tomato	cytosol	7.83	20.69

Protein Annotations

EnsemblPlants:Bra037954.1	EnsemblPlants:Bra037954.1-P	EnsemblPlantsGene:Bra037954	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF461	PFAM:PF00657	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000253E716
UniProt:M4FA40	MapMan:35.1	:	:	:	:

Description

AT1G54020 (E=3e-173) | myrosinase-associated protein, putative

Coordinates

chrA06:+:454289..456741

Molecular Weight (calculated)

42677.9 Da

IEP (calculated)

7.554

GRAVY (calculated)

-0.188

Length

383 amino acids

Sequence
(BLAST)

001: MAPNFSLASV LGVLLVFTLF HNPIIVAGQH IPAVALFTFG DSNFDAGNRK FITSGTLPQN FWPYGKSRDD PNGKLSDGKI VPDFIAKFMG ISHDLPPALK
101: PGADASRGAS FAVDSATILG TPKDSLNLNQ QVRKFDQMRS NWNDDYILKS LFMISMGMED YLNFTKSNPA ADGSAQEAFV TSVSSRLKYN IEMLYSFGAS
201: KFVVYTLPPL GCLPIVRQDF NTGNDCYEKL NDLAKLHNAK IGPMLNDLAT AKPGFQFTVF DFYNVILRRT QRNMNFRFSL TNVSCCGTGT HKAYGCGLPN
301: VHSKLCEYQR SYLYFDGRHN SEKAQESFAH LLFGADPNVI QPMNIRELIT YPVNTNMSEF WKEPVERNLS LVHDNVVSAS ESM

Best Arabidopsis Sequence Match ( AT1G54020.2 )
(BLAST)

001: MECSSVSVLG ILLVFPLLHN LVTISGQNLP AVGLFTFGDS NFDAGNKKFL TSAPLPQNFW PYGKSRDDPK GKFSDGKIVP DFIAKFMGIP HDLPPALKPG
101: TDVSRGASFA VGSASILGSP KDSLALNQQV RKFNQMISNW KVDYIQKSVF MISIGMEDYY NFTKNNPNAE VSAQQAFVTS VTNRFKSDIN LLYSSGASKF
201: VVHLLAPLGC LPIARQEFKT GNNCYEKLND LAKQHNAKIG PILNEMAETK PDFQFTVFDF YNVILRRTQR NMNYRFSVTN ISCCGVGTHY AYGCGLPNVH
301: SKLCEYQRSY LYFDARHNTE KAQEAFAHLI FGADPNVIQP MNVRELMVYP VNEPMREFWE DPMDEKLSLV QY

Arabidopsis Description

GDSL esterase/lipase At1g54020 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5N8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.