Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 72.21 | 74.02 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 69.48 | 70.44 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 64.58 | 64.58 |
| PGSC0003DMT400016123 | Potato | cytosol | 14.44 | 60.92 |
| KRG97291 | Soybean | extracellular | 15.8 | 55.24 |
| PGSC0003DMT400017106 | Potato | extracellular | 54.5 | 54.05 |
| VIT_09s0002g00510.t01 | Wine grape | extracellular | 52.86 | 52.57 |
| VIT_09s0002g00530.t01 | Wine grape | cytosol | 48.77 | 52.03 |
| KRH69020 | Soybean | extracellular | 47.14 | 49.43 |
| KRG97292 | Soybean | extracellular | 48.77 | 48.91 |
| VIT_09s0002g00540.t01 | Wine grape | extracellular | 51.77 | 48.22 |
| VIT_09s0002g00520.t01 | Wine grape | extracellular | 41.69 | 47.96 |
| VIT_09s0002g00500.t01 | Wine grape | cytosol | 37.87 | 47.77 |
| KRG94370 | Soybean | extracellular | 47.41 | 47.67 |
| Bra039701.1-P | Field mustard | extracellular, plasma membrane | 41.14 | 47.04 |
| CDY02490 | Canola | extracellular, vacuole | 47.41 | 46.9 |
| Bra030917.1-P | Field mustard | extracellular, vacuole | 47.41 | 46.9 |
| KRH13793 | Soybean | nucleus | 47.14 | 46.88 |
| KRH13794 | Soybean | nucleus | 47.14 | 46.88 |
| PGSC0003DMT400074599 | Potato | cytosol | 42.23 | 46.83 |
| AT1G53970.2 | Thale cress | cytosol | 12.26 | 46.39 |
| KRH47690 | Soybean | extracellular, vacuole | 46.05 | 46.17 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 45.78 | 46.15 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 45.78 | 45.9 |
| CDY24064 | Canola | plasma membrane | 46.59 | 45.48 |
| KRH07083 | Soybean | extracellular | 34.06 | 45.45 |
| PGSC0003DMT400074252 | Potato | extracellular | 45.5 | 45.26 |
| KRH06260 | Soybean | cytosol, peroxisome | 33.52 | 45.22 |
| Bra030916.1-P | Field mustard | plastid | 44.69 | 45.18 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 45.5 | 45.01 |
| CDY36617 | Canola | plasma membrane | 41.96 | 44.51 |
| Bra027356.1-P | Field mustard | extracellular | 45.23 | 44.38 |
| CDX97558 | Canola | extracellular | 45.23 | 44.38 |
| CDX98433 | Canola | extracellular, vacuole | 45.23 | 44.38 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 43.87 | 43.4 |
| CDY30674 | Canola | extracellular, vacuole | 43.6 | 43.01 |
| AT5G40990.1 | Thale cress | plasma membrane | 43.6 | 42.78 |
| Bra014375.1-P | Field mustard | extracellular, vacuole | 43.32 | 42.74 |
| AT1G53940.2 | Thale cress | plasma membrane | 42.78 | 41.76 |
| CDY69407 | Canola | extracellular | 28.34 | 41.43 |
| AT3G14225.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 41.96 | 40.85 |
| AT1G53990.1 | Thale cress | extracellular, plasma membrane | 40.6 | 40.6 |
| CDX98432 | Canola | extracellular | 40.87 | 40.21 |
| CDX97557 | Canola | extracellular | 40.6 | 39.95 |
| Bra027357.1-P | Field mustard | extracellular | 40.33 | 39.68 |
| CDY69208 | Canola | mitochondrion | 33.52 | 39.42 |
| CDY71922 | Canola | extracellular, plasma membrane | 22.62 | 37.39 |
| CDY54192 | Canola | extracellular | 10.35 | 28.36 |
| CDY33240 | Canola | vacuole | 26.98 | 27.58 |
| AT3G14220.1 | Thale cress | vacuole | 27.25 | 27.55 |
| CDY61480 | Canola | extracellular, vacuole | 29.43 | 27.41 |
| Bra030911.1-P | Field mustard | extracellular, vacuole | 29.43 | 27.34 |
| CDY54197 | Canola | extracellular, vacuole | 29.43 | 27.34 |
| CDY39106 | Canola | vacuole | 26.7 | 27.3 |
| Bra021542.1-P | Field mustard | vacuole | 26.7 | 27.3 |
| Bra014371.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 28.88 | 27.25 |
| Bra037955.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 29.16 | 27.16 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.7 | 27.15 |
| CDX75755 | Canola | plastid | 30.79 | 26.34 |
| CDY30680 | Canola | mitochondrion | 28.61 | 25.99 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 27.52 | 25.77 |
| Bra037957.1-P | Field mustard | extracellular | 26.7 | 25.59 |
| Bra030915.1-P | Field mustard | extracellular | 26.7 | 25.39 |
| Bra037954.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 26.43 | 25.33 |
| CDY51412 | Canola | cytosol | 26.43 | 25.33 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 26.43 | 25.19 |
| CDY36628 | Canola | cytosol | 26.16 | 25.07 |
| CDY54591 | Canola | extracellular | 26.43 | 25.06 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 25.34 | 25.0 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.16 | 25.0 |
| CDY08214 | Canola | cytosol | 18.8 | 25.0 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 26.16 | 24.94 |
| Bra014374.1-P | Field mustard | endoplasmic reticulum, vacuole | 26.16 | 24.94 |
| Bra014372.1-P | Field mustard | extracellular | 25.89 | 24.74 |
| CDY36623 | Canola | endoplasmic reticulum | 25.61 | 24.54 |
| CDX97555 | Canola | extracellular | 25.61 | 24.35 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 25.61 | 24.23 |
| Bra027359.1-P | Field mustard | extracellular | 24.52 | 23.94 |
| AT1G54010.1 | Thale cress | extracellular | 25.07 | 23.83 |
| Bra027358.1-P | Field mustard | extracellular | 25.07 | 23.71 |
| CDX97556 | Canola | extracellular | 25.07 | 23.71 |
| CDY54588 | Canola | extracellular | 24.8 | 23.58 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 25.07 | 23.53 |
| CDY54196 | Canola | extracellular | 24.8 | 23.39 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 26.43 | 23.26 |
| CDY30676 | Canola | cytosol | 16.08 | 23.23 |
| PGSC0003DMT400096676 | Potato | mitochondrion | 25.89 | 22.51 |
| CDY54194 | Canola | cytosol | 16.89 | 22.14 |
| Bra030913.1-P | Field mustard | cytosol | 16.89 | 22.14 |
| CDY51410 | Canola | mitochondrion, plastid | 8.17 | 21.43 |
| CDY36625 | Canola | extracellular | 7.63 | 20.59 |
| Bra030912.1-P | Field mustard | extracellular | 24.8 | 20.45 |
| CDY54198 | Canola | cytosol | 6.54 | 18.05 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400013272 | EnsemblPlantsGene:PGSC0003DMG400005182 | EntrezGene:102587742 | Gene3D:3.40.50.1110 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF262 | PFAM:PF00657 | PGSC:PGSC0003DMG400005182 | SignalP:SignalP-noTM | SUPFAM:SSF52266 |
| UniParc:UPI000294AF5C | UniProt:M1A2L6 | MapMan:35.1 | : | : | : |
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005182]
Coordinates
chr6:-:47120766..47128341
Molecular Weight (calculated)
41050.7 Da
IEP (calculated)
9.128
GRAVY (calculated)
-0.061
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MALISSLCIF VLVAHFSTPI VCHKRPHQAA LFVFGDSIFD PGNNKYINPN TSSQGSNNFP YGESFFKYPT GRASDGRLIP DFIAEYANLP FIPPYFEIGK
101: EHFIHGVNFA SGGSGCLTET SRGFAIDLKT QLKLFLNVTQ LLKNKVCEIE SKQILSNAVY IFSTASNDFL FPLLANFTSP YSDTEYLQMV MGNLTSVLKG
201: IYKEGGRKFV MFNLGPLGCI PSIRALNLQK GVTNGSCMEE ATNKAKMFNS ALPRMFKQLE KQLPGFKYTI FNFFKVFADN IHNPTKYGFK ISKTACCGTG
301: PFRGILSCGG TMQGKEYELC KNVKEYLFFD SLHPTELAYQ QYAKLLWNGT PDMVAPYKLK SFFKLST
101: EHFIHGVNFA SGGSGCLTET SRGFAIDLKT QLKLFLNVTQ LLKNKVCEIE SKQILSNAVY IFSTASNDFL FPLLANFTSP YSDTEYLQMV MGNLTSVLKG
201: IYKEGGRKFV MFNLGPLGCI PSIRALNLQK GVTNGSCMEE ATNKAKMFNS ALPRMFKQLE KQLPGFKYTI FNFFKVFADN IHNPTKYGFK ISKTACCGTG
301: PFRGILSCGG TMQGKEYELC KNVKEYLFFD SLHPTELAYQ QYAKLLWNGT PDMVAPYKLK SFFKLST
001: MASPRFNSII IILFICTISL SIVSISCKED LKTNQAALFA FGDSLFEAGN NNYFDSISSF RSNFWPYGKT TFKFPTGRVS DGRIMIDFIA EYAWLPLIPP
101: NLQPGYSNSQ LTYGLNFATT AAGVFAGTFP GSSKDLGTQL NNFKNVEKTL RSNLGDAEAR RVISKAVYLF HIGANDYQYP FFANTSTFSN TTKERFIDFV
201: IGNTTTVIEE LYKLGARKFG FLSLGPFGCT PSALIINSTK IGSCFEPVTE LINLHNQEFP KVLRRLERRL SGFKYALHDF HTSLSQRINN PSRYGFKEGE
301: MACCGSGPLR GINTCGFRNG PSQGYKLCEN ADDYVFFDPS HLTETAHQQI AELIWSGPPN VTAPYNLKTL FRL
101: NLQPGYSNSQ LTYGLNFATT AAGVFAGTFP GSSKDLGTQL NNFKNVEKTL RSNLGDAEAR RVISKAVYLF HIGANDYQYP FFANTSTFSN TTKERFIDFV
201: IGNTTTVIEE LYKLGARKFG FLSLGPFGCT PSALIINSTK IGSCFEPVTE LINLHNQEFP KVLRRLERRL SGFKYALHDF HTSLSQRINN PSRYGFKEGE
301: MACCGSGPLR GINTCGFRNG PSQGYKLCEN ADDYVFFDPS HLTETAHQQI AELIWSGPPN VTAPYNLKTL FRL
Arabidopsis Description
GLIP4GDSL esterase/lipase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJP1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.