Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g065010.2.1 | Tomato | nucleus | 91.71 | 91.71 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 70.44 | 69.48 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 69.06 | 68.12 |
| KRG97291 | Soybean | extracellular | 17.68 | 60.95 |
| PGSC0003DMT400016123 | Potato | cytosol | 13.81 | 57.47 |
| PGSC0003DMT400017106 | Potato | extracellular | 55.25 | 54.05 |
| KRG97292 | Soybean | extracellular | 53.04 | 52.46 |
| KRH69020 | Soybean | extracellular | 50.28 | 52.0 |
| VIT_09s0002g00540.t01 | Wine grape | extracellular | 55.8 | 51.27 |
| KRG94370 | Soybean | extracellular | 51.38 | 50.96 |
| VIT_09s0002g00530.t01 | Wine grape | cytosol | 48.34 | 50.87 |
| VIT_09s0002g00510.t01 | Wine grape | extracellular | 51.38 | 50.41 |
| VIT_09s0002g00520.t01 | Wine grape | extracellular | 44.2 | 50.16 |
| Bra039701.1-P | Field mustard | extracellular, plasma membrane | 44.48 | 50.16 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 49.72 | 49.18 |
| PGSC0003DMT400074252 | Potato | extracellular | 50.0 | 49.05 |
| CDY24064 | Canola | plasma membrane | 50.83 | 48.94 |
| KRH07083 | Soybean | extracellular | 37.02 | 48.73 |
| KRH13794 | Soybean | nucleus | 49.17 | 48.24 |
| KRH13793 | Soybean | nucleus | 49.17 | 48.24 |
| PGSC0003DMT400074599 | Potato | cytosol | 43.92 | 48.04 |
| Bra030917.1-P | Field mustard | extracellular, vacuole | 49.17 | 47.98 |
| CDY02490 | Canola | extracellular, vacuole | 49.17 | 47.98 |
| CDY36617 | Canola | plasma membrane | 45.86 | 47.98 |
| CDX98433 | Canola | extracellular, vacuole | 49.17 | 47.59 |
| Bra027356.1-P | Field mustard | extracellular | 48.9 | 47.33 |
| CDX97558 | Canola | extracellular | 48.9 | 47.33 |
| CDY30674 | Canola | extracellular, vacuole | 48.34 | 47.04 |
| KRH47690 | Soybean | extracellular, vacuole | 47.51 | 46.99 |
| Bra014375.1-P | Field mustard | extracellular, vacuole | 48.07 | 46.77 |
| AT5G40990.1 | Thale cress | plasma membrane | 48.07 | 46.52 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 46.69 | 46.43 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 47.51 | 46.36 |
| AT1G53940.2 | Thale cress | plasma membrane | 48.07 | 46.28 |
| Bra030916.1-P | Field mustard | plastid | 46.13 | 46.01 |
| VIT_09s0002g00500.t01 | Wine grape | cytosol | 36.74 | 45.7 |
| AT1G53970.2 | Thale cress | cytosol | 12.15 | 45.36 |
| KRH06260 | Soybean | cytosol, peroxisome | 33.98 | 45.22 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 46.13 | 45.01 |
| AT1G53990.1 | Thale cress | extracellular, plasma membrane | 44.75 | 44.14 |
| CDY69407 | Canola | extracellular | 30.39 | 43.82 |
| AT3G14225.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 43.65 | 41.91 |
| CDY69208 | Canola | mitochondrion | 35.91 | 41.67 |
| CDX97557 | Canola | extracellular | 41.71 | 40.48 |
| CDX98432 | Canola | extracellular | 41.71 | 40.48 |
| Bra027357.1-P | Field mustard | extracellular | 41.44 | 40.21 |
| CDY71922 | Canola | extracellular, plasma membrane | 24.03 | 39.19 |
| CDY54192 | Canola | extracellular | 10.5 | 28.36 |
| CDY61480 | Canola | extracellular, vacuole | 30.66 | 28.17 |
| CDY54197 | Canola | extracellular, vacuole | 30.66 | 28.1 |
| Bra030911.1-P | Field mustard | extracellular, vacuole | 30.66 | 28.1 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.9 | 27.98 |
| Bra037955.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 30.39 | 27.92 |
| Bra014371.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 28.45 | 26.48 |
| CDX75755 | Canola | plastid | 31.22 | 26.34 |
| AT3G14220.1 | Thale cress | vacuole | 26.24 | 26.17 |
| CDY30680 | Canola | mitochondrion | 29.01 | 25.99 |
| CDY33240 | Canola | vacuole | 25.69 | 25.91 |
| CDY39106 | Canola | vacuole | 25.14 | 25.35 |
| Bra021542.1-P | Field mustard | vacuole | 25.14 | 25.35 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 25.69 | 25.0 |
| Bra037957.1-P | Field mustard | extracellular | 26.24 | 24.8 |
| CDY36628 | Canola | cytosol | 25.97 | 24.54 |
| CDY51412 | Canola | cytosol | 25.69 | 24.28 |
| Bra037954.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 25.69 | 24.28 |
| Bra030915.1-P | Field mustard | extracellular | 25.69 | 24.09 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 25.97 | 23.98 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 25.41 | 23.9 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 27.35 | 23.74 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 25.14 | 23.64 |
| Bra014374.1-P | Field mustard | endoplasmic reticulum, vacuole | 25.14 | 23.64 |
| CDX97555 | Canola | extracellular | 25.14 | 23.58 |
| CDY08214 | Canola | cytosol | 17.96 | 23.55 |
| CDY54591 | Canola | extracellular | 25.14 | 23.51 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 24.86 | 23.44 |
| Bra014372.1-P | Field mustard | extracellular | 24.86 | 23.44 |
| AT1G54010.1 | Thale cress | extracellular | 24.86 | 23.32 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 25.14 | 23.27 |
| CDY36623 | Canola | endoplasmic reticulum | 24.59 | 23.24 |
| Bra027359.1-P | Field mustard | extracellular | 24.03 | 23.14 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 24.59 | 22.94 |
| CDY54588 | Canola | extracellular | 24.31 | 22.8 |
| CDY36625 | Canola | extracellular | 8.56 | 22.79 |
| PGSC0003DMT400096676 | Potato | mitochondrion | 26.52 | 22.75 |
| Bra027358.1-P | Field mustard | extracellular | 24.31 | 22.68 |
| CDX97556 | Canola | extracellular | 24.31 | 22.68 |
| CDY54196 | Canola | extracellular | 24.31 | 22.62 |
| CDY51410 | Canola | mitochondrion, plastid | 8.56 | 22.14 |
| CDY54194 | Canola | cytosol | 16.3 | 21.07 |
| Bra030913.1-P | Field mustard | cytosol | 16.3 | 21.07 |
| CDY30676 | Canola | cytosol | 14.64 | 20.87 |
| Bra030912.1-P | Field mustard | extracellular | 24.31 | 19.78 |
| CDY54198 | Canola | cytosol | 6.63 | 18.05 |
Protein Annotations
| EntrezGene:102597571 | Gene3D:3.40.50.1110 | MapMan:35.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 |
| UniProt:M1D3H2 | PFAM:PF00657 | EnsemblPlantsGene:PGSC0003DMG400031313 | PGSC:PGSC0003DMG400031313 | EnsemblPlants:PGSC0003DMT400080416 | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF262 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0002962A0C | RefSeq:XP_006356505.1 | SEG:seg | : | : | : |
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400031313]
Coordinates
chr6:-:47054937..47057941
Molecular Weight (calculated)
40591.1 Da
IEP (calculated)
9.597
GRAVY (calculated)
-0.134
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSSSLFNF YIFILVVCFI HPILCISSHG RPQAGLFVFG DSLFDPGNNN YINTTTEYQA NWRPYGESFF KYPTGRFSDG RLIPDFIAEY ADLPLIPSYF
101: EIGKQHFVHG VNFASGGAGC LVETHRGFVI DLQTQLKYFK KVVKLLKKKV GKTESKQILS NAVYIFSAGG NDYLAPLSTN SSYPEREYLE MIMGNLTSVL
201: KGIYKEGGRK FGMLNMVPIG RLPNIIALNG NSIGKITNLV KMHNSALPNT LKQLEKQLPG FKYTLFNLFK VFSDSVDNPT KYGFKTSKTA CCGDGPLRGI
301: YSCGGKRQAK KYKLCKNVKD YLFFDSFHPS ELASKQYAEV MWNGTPDVVA PYNLKSFFEL ST
101: EIGKQHFVHG VNFASGGAGC LVETHRGFVI DLQTQLKYFK KVVKLLKKKV GKTESKQILS NAVYIFSAGG NDYLAPLSTN SSYPEREYLE MIMGNLTSVL
201: KGIYKEGGRK FGMLNMVPIG RLPNIIALNG NSIGKITNLV KMHNSALPNT LKQLEKQLPG FKYTLFNLFK VFSDSVDNPT KYGFKTSKTA CCGDGPLRGI
301: YSCGGKRQAK KYKLCKNVKD YLFFDSFHPS ELASKQYAEV MWNGTPDVVA PYNLKSFFEL ST
001: MENSQLVSIT FLAYTIIISI GSINCIDNNN LVTNQSALFV FGDSVFDAGN NNYIDTLSSV RSNYWPYGQT TFKSPTGRVS DGRLIPDFIA EYAWLPLIPP
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN
101: NLQPFNGNSQ FAYGVNFASG GAGALVGTFS GLVINLRTQL NNFKKVEEML RSKLGDAEGK RVISRAVYLF HIGLNDYQYP FTTNSSLFQS ISNEKYVDYV
201: VGNMTDVFKE VYNLGGRKFG ILNTGPYDCA PASLVIDQTK IRSCFQPVTE LINMHNEKLL NGLRRLNHEL SGFKYALHDY HTSLSERMND PSKYGFKEGK
301: KACCGSGPLR GINTCGGRMG LSQSYELCEN VTDYLFFDPF HLTEKANRQI AELIWSGPTN ITGPYNLKAL FELN
Arabidopsis Description
GLIP1GDSL esterase/lipase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLN0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.