Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- golgi 4
- plasma membrane 6
- endoplasmic reticulum 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G40990.1 | Thale cress | plasma membrane | 81.38 | 81.82 |
| AT1G53970.2 | Thale cress | cytosol | 21.01 | 81.44 |
| CDY24064 | Canola | plasma membrane | 77.13 | 77.13 |
| Bra039701.1-P | Field mustard | extracellular, plasma membrane | 65.16 | 76.32 |
| CDY36617 | Canola | plasma membrane | 69.68 | 75.72 |
| AT1G53990.1 | Thale cress | extracellular, plasma membrane | 72.34 | 74.11 |
| AT3G14225.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 65.43 | 65.25 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 47.87 | 49.05 |
| Solyc11g051060.1.1 | Tomato | vacuole | 46.54 | 48.61 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 46.28 | 48.07 |
| Solyc06g065010.2.1 | Tomato | nucleus | 45.74 | 47.51 |
| AT1G53920.1 | Thale cress | cytosol | 48.4 | 47.27 |
| PGSC0003DMT400016123 | Potato | cytosol | 10.9 | 47.13 |
| Solyc01g109020.1.1 | Tomato | extracellular | 23.67 | 46.84 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 8.78 | 46.48 |
| Solyc11g021040.1.1 | Tomato | extracellular | 25.8 | 46.41 |
| Solyc06g064960.2.1 | Tomato | extracellular | 42.02 | 43.17 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 41.76 | 42.78 |
| PGSC0003DMT400017106 | Potato | extracellular | 42.02 | 42.7 |
| Solyc06g064990.2.1 | Tomato | extracellular | 43.88 | 42.64 |
| Solyc06g064980.2.1 | Tomato | extracellular | 43.09 | 42.3 |
| PGSC0003DMT400074599 | Potato | cytosol | 34.84 | 39.58 |
| Solyc04g028470.1.1 | Tomato | cytosol | 33.51 | 39.38 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 32.98 | 34.64 |
| AT1G71120.1 | Thale cress | endoplasmic reticulum | 27.93 | 29.01 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 31.38 | 28.3 |
| AT3G14220.1 | Thale cress | vacuole | 27.13 | 28.1 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 27.13 | 27.42 |
| Solyc11g051120.1.1 | Tomato | cytosol | 10.37 | 26.9 |
| AT1G54010.1 | Thale cress | extracellular | 27.39 | 26.68 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 26.6 | 25.58 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 26.06 | 25.0 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | EntrezGene:841833 | ProteinID:AAD25766.1 | ProteinID:ANM59524.1 | ArrayExpress:AT1G53940 |
| EnsemblPlantsGene:AT1G53940 | RefSeq:AT1G53940 | TAIR:AT1G53940 | RefSeq:AT1G53940-TAIR-G | EnsemblPlants:AT1G53940.2 | InterPro:GDSL |
| Symbol:GLIP2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006629 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009734 |
| GO:GO:0009751 | GO:GO:0009753 | GO:GO:0009814 | GO:GO:0009987 | GO:GO:0010930 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016042 | GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | InterPro:IPR036514 |
| InterPro:Lipase_GDSL_AS | RefSeq:NP_175797.2 | PFAM:PF00657 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF301 |
| UniProt:Q9SYF0 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00000A95DA | SEG:seg | : | : | : | : |
Description
GLIP2GDSL esterase/lipase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF0]
Coordinates
chr1:+:20143144..20144974
Molecular Weight (calculated)
42016.2 Da
IEP (calculated)
8.426
GRAVY (calculated)
-0.166
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSRSTLII FFAYTTIILI GSINCRDNNN NNLVTNQSAL FVFGDSVFDA GNNNYIDTLP SFRSNYWPYG QTTFKFPTGR VSDGRTIPDF IAEYAWLPLI
101: PAYLQPSNGK NQFPYGVSFA SAGAGALVGT FPGMVINLKS QLNNFKKVEK LLRSTLGEAQ GKMVISRAVY LFHIGVNDYQ YPFSTNSSIF QSSPQEIYVD
201: FVVGNTTAVI KEVYKIGGRK FGFLNMGAYD CAPASLIIDQ TKIGTCFKPV TELINLHNEK LESGLRRLER ELSGFKYALH DYHTSLSVRM NNPSKYGFKE
301: GKMACCGTGP LRGINTCGGR MGVSQSYELC EKVTDYLFFD HFHLTEKAHQ QIAELIWSGP TNVTKPYNLQ ALFELN
101: PAYLQPSNGK NQFPYGVSFA SAGAGALVGT FPGMVINLKS QLNNFKKVEK LLRSTLGEAQ GKMVISRAVY LFHIGVNDYQ YPFSTNSSIF QSSPQEIYVD
201: FVVGNTTAVI KEVYKIGGRK FGFLNMGAYD CAPASLIIDQ TKIGTCFKPV TELINLHNEK LESGLRRLER ELSGFKYALH DYHTSLSVRM NNPSKYGFKE
301: GKMACCGTGP LRGINTCGGR MGVSQSYELC EKVTDYLFFD HFHLTEKAHQ QIAELIWSGP TNVTKPYNLQ ALFELN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.