Factsheet for Solyc01g109020.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g081170.1.1
Solyc01g109020.1.1
Solyc04g008430.1.1
Solyc04g028470.1.1
Solyc06g064960.2.1
Solyc06g064970.2.1
Solyc06g064980.2.1
Solyc06g064990.2.1
Solyc06g065010.2.1
Solyc11g021040.1.1
Solyc11g051060.1.1
Solyc11g051100.1.1
Solyc11g051120.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54010.1	Solyc04g008430.1.1	AT2G01950.1	19000166
AT1G54030.1	Solyc01g081170.1.1	AT1G52400.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc01g081170.1.1	AT3G09260.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc01g081170.1.1	AT3G21370.1	23155454
AT3G14220.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g021040.1.1	Tomato	extracellular	96.32	87.56
KRG97291	Soybean	extracellular	28.95	52.38
AT1G53970.2	Thale cress	cytosol	25.79	50.52
Solyc06g064960.2.1	Tomato	extracellular	85.26	44.26
Solyc06g064970.2.1	Tomato	extracellular, vacuole	77.89	41.34
Solyc06g064990.2.1	Tomato	extracellular	82.11	40.31
Solyc06g065010.2.1	Tomato	nucleus	72.63	38.12
Solyc06g064980.2.1	Tomato	extracellular	75.26	37.34
CDY71922	Canola	extracellular, plasma membrane	37.89	32.43
Solyc11g051060.1.1	Tomato	vacuole	60.53	31.94
KRH07083	Soybean	extracellular	43.16	29.82
Bra039701.1-P	Field mustard	extracellular, plasma membrane	47.89	28.35
KRG97292	Soybean	extracellular	52.63	27.32
VIT_09s0002g00520.t01	Wine grape	extracellular	44.74	26.65
VIT_09s0002g00510.t01	Wine grape	extracellular	51.58	26.56
VIT_09s0002g00530.t01	Wine grape	cytosol	47.89	26.45
CDY02490	Canola	extracellular, vacuole	51.58	26.42
Bra030917.1-P	Field mustard	extracellular, vacuole	51.58	26.42
VIT_09s0002g00540.t01	Wine grape	extracellular	54.74	26.4
KRH69020	Soybean	extracellular	48.42	26.29
CDY54192	Canola	extracellular	18.42	26.12
Solyc12g049550.1.1	Tomato	extracellular	50.0	26.03
CDY24064	Canola	plasma membrane	51.05	25.8
KRG94370	Soybean	extracellular	49.47	25.75
CDX98433	Canola	extracellular, vacuole	50.0	25.4
KRH13794	Soybean	nucleus	48.95	25.2
CDX97558	Canola	extracellular	49.47	25.13
Bra027356.1-P	Field mustard	extracellular	49.47	25.13
CDY36619	Canola	endoplasmic reticulum, plasma membrane	48.95	25.07
KRH13793	Soybean	nucleus	48.42	24.93
AT5G40990.1	Thale cress	plasma membrane	48.42	24.6
KRH47690	Soybean	extracellular, vacuole	47.37	24.59
Bra030916.1-P	Field mustard	plastid	46.84	24.52
CDY30674	Canola	extracellular, vacuole	47.89	24.46
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	46.84	24.32
Bra014375.1-P	Field mustard	extracellular, vacuole	47.37	24.19
VIT_09s0002g00550.t01	Wine grape	extracellular	46.32	24.18
Solyc04g028470.1.1	Tomato	cytosol	40.0	23.75
AT1G53940.2	Thale cress	plasma membrane	46.84	23.67
VIT_09s0002g00570.t01	Wine grape	extracellular	45.79	23.45
CDY36617	Canola	plasma membrane	42.63	23.41
AT1G53990.1	Thale cress	extracellular, plasma membrane	41.58	21.53
AT3G14225.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	42.11	21.22
CDX98432	Canola	extracellular	41.58	21.18
Bra027357.1-P	Field mustard	extracellular	41.58	21.18
CDX97557	Canola	extracellular	41.58	21.18
VIT_09s0002g00500.t01	Wine grape	cytosol	28.42	18.56
KRH06260	Soybean	cytosol, peroxisome	26.32	18.38
CDY69208	Canola	mitochondrion	26.32	16.03
Solyc11g051120.1.1	Tomato	cytosol	12.11	15.86
CDX75755	Canola	plastid	34.21	15.15
Solyc04g007570.1.1	Tomato	extracellular, plasma membrane, vacuole	28.95	15.07
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	28.42	14.96
CDY61480	Canola	extracellular, vacuole	29.47	14.21
CDY54197	Canola	extracellular, vacuole	28.95	13.92
Bra030911.1-P	Field mustard	extracellular, vacuole	28.95	13.92
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	28.42	13.71
CDY33240	Canola	vacuole	25.79	13.65
CDY39106	Canola	vacuole	25.26	13.37
Bra021542.1-P	Field mustard	vacuole	25.26	13.37
Bra037957.1-P	Field mustard	extracellular	26.84	13.32
CDY36628	Canola	cytosol	26.32	13.05
CDX97555	Canola	extracellular	26.32	12.95
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.32	12.85
CDY69407	Canola	extracellular	16.84	12.75
AT3G14220.1	Thale cress	vacuole	23.68	12.4
CDY30680	Canola	mitochondrion	26.32	12.38
AT1G54020.2	Thale cress	endoplasmic reticulum	24.21	12.37
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	24.74	12.27
CDY51412	Canola	cytosol	24.74	12.27
Bra027359.1-P	Field mustard	extracellular	24.21	12.23
AT3G14210.1	Thale cress	extracellular, golgi	24.74	11.99
AT1G54000.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	24.21	11.76
CDY30675	Canola	endoplasmic reticulum, vacuole	23.68	11.69
AT1G54010.1	Thale cress	extracellular	23.68	11.66
CDY36623	Canola	endoplasmic reticulum	23.16	11.49
CDY08211	Canola	endoplasmic reticulum, vacuole	23.16	11.43
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	23.16	11.43
Bra030915.1-P	Field mustard	extracellular	22.63	11.14
CDY54588	Canola	extracellular	22.63	11.14
CDY54591	Canola	extracellular	22.63	11.11
CDX98428	Canola	extracellular, plasma membrane, vacuole	22.63	11.08
CDY54196	Canola	extracellular	22.63	11.05
AT1G54030.1	Thale cress	endoplasmic reticulum, nucleus, vacuole	24.21	11.03
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	22.11	10.94
Bra014372.1-P	Field mustard	extracellular	22.11	10.94
Bra027358.1-P	Field mustard	extracellular	22.11	10.82
CDX97556	Canola	extracellular	22.11	10.82
Bra030912.1-P	Field mustard	extracellular	22.63	9.66
CDY54194	Canola	cytosol	8.95	6.07
Bra030913.1-P	Field mustard	cytosol	8.95	6.07
CDY08214	Canola	cytosol	7.37	5.07
CDY30676	Canola	cytosol	4.74	3.54
CDY54198	Canola	cytosol	2.11	3.01
CDY51410	Canola	mitochondrion, plastid	0.0	0.0
CDY36625	Canola	extracellular	0.0	0.0
Solyc11g051100.1.1	Tomato	cytosol, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc01g109020.1.1	EnsemblPlantsGene:Solyc01g109020.1	Gene3D:3.40.50.1110	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF262	SignalP:SignalP-noTM	UniParc:UPI0002768621	UniProt:K4B3B6	MapMan:35.1	:

Description

No Description!

Coordinates

chr1:-:96105325..96106245

Molecular Weight (calculated)

21155.3 Da

IEP (calculated)

8.036

GRAVY (calculated)

-0.019

Length

190 amino acids

Sequence
(BLAST)

001: MALISSFCIF FLVAHFATPI VCIRNPINQT PALFVFGDSV FDPGNNNYIN TTTNFQENYL PYGESFFKYP TGRNSDGRLI PDFIAEYAKL PFIPPYFEIG
101: KKHLVHGVNF ASGGSGCLAE TARGFKKVGE TESKQILSNA VYIFSTFNKD MVAPLFANSS FPYSDTEYLQ MIMGNLTSVL KGIYKEGGRK

Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)

001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP

Arabidopsis Description

GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.