Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000640.1-P
Bra001320.1-P
Bra001631.1-P
Bra001786.1-P
Bra001787.1-P
Bra003836.1-P
Bra003837.1-P
Bra003839.1-P
Bra014372.1-P
Bra014374.1-P
Bra015981.1-P
Bra018969.1-P
Bra023886.1-P
Bra026178.1-P
Bra027359.1-P
Bra030386.1-P
Bra030912.1-P
Bra030913.1-P
Bra030915.1-P
Bra032150.1-P
Bra034060.1-P
Bra035787.1-P
Bra037954.1-P
Bra037957.1-P
Bra040903.1-P
Bra040904.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54030.1 Bra018969.1-P AT1G52400.1 23155454
AT1G54030.1 Bra030386.1-P AT1G52400.1 23155454
AT1G54030.1 Bra014372.1-P AT1G54000.1 23155454
AT1G54030.1 Bra014374.1-P AT1G54000.1 23155454
AT1G54030.1 Bra030912.1-P AT1G54000.1 23155454
AT1G54030.1 Bra030915.1-P AT1G54000.1 23155454
AT1G54030.1 Bra014372.1-P AT1G54010.1 23155454
AT1G54030.1 Bra014374.1-P AT1G54010.1 23155454
AT1G54030.1 Bra030912.1-P AT1G54010.1 23155454
AT1G54030.1 Bra030915.1-P AT1G54010.1 23155454
AT1G54030.1 Bra030913.1-P AT1G54020.2 23155454
AT1G54030.1 Bra037954.1-P AT1G54020.2 23155454
AT1G54030.1 Bra037957.1-P AT1G54020.2 23155454
AT1G54030.1 Bra003836.1-P AT1G58270.1 23155454
AT1G54030.1 Bra003837.1-P AT1G58270.1 23155454
AT1G54030.1 Bra003839.1-P AT1G58270.1 23155454
AT1G54030.1 Bra015981.1-P AT1G58270.1 23155454
AT1G54030.1 Bra001320.1-P AT3G09260.1 23155454
AT1G54030.1 Bra034060.1-P AT3G09260.1 23155454
AT1G54030.1 Bra027359.1-P AT3G14210.1 23155454
AT1G54030.1 Bra001631.1-P AT3G16420.1 23155454
AT1G54030.1 Bra000640.1-P AT3G20370.1 23155454
AT1G54030.1 Bra001786.1-P AT3G20370.1 23155454
AT1G54030.1 Bra001787.1-P AT3G20370.1 23155454
AT1G54030.1 Bra032150.1-P AT3G20370.1 23155454
AT1G54030.1 Bra035787.1-P AT3G20370.1 23155454
AT1G54030.1 Bra040903.1-P AT3G20370.1 23155454
AT1G54030.1 Bra040904.1-P AT3G20370.1 23155454
AT1G54030.1 Bra023886.1-P AT3G21370.1 23155454
AT1G54030.1 Bra026178.1-P AT3G21370.1 23155454
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54197 Canola extracellular, vacuole 99.75 99.75
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 84.81 86.12
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 84.05 84.26
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 78.48 74.34
Bra030915.1-P Field mustard extracellular 37.47 38.34
Bra021542.1-P Field mustard vacuole 34.68 38.16
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 36.96 37.92
PGSC0003DMT400016123 Potato cytosol 8.1 36.78
Bra014372.1-P Field mustard extracellular 35.44 36.46
Bra027359.1-P Field mustard extracellular 33.42 35.11
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 33.42 34.46
Bra037957.1-P Field mustard extracellular 33.42 34.46
Bra027358.1-P Field mustard extracellular 33.16 33.76
KRH69020 Soybean extracellular 29.62 33.43
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 30.89 33.33
VIT_09s0002g00550.t01 Wine grape extracellular 30.38 32.97
KRG94370 Soybean extracellular 30.38 32.88
KRH13794 Soybean nucleus 30.63 32.79
Bra030916.1-P Field mustard plastid 30.13 32.78
Solyc11g051060.1.1 Tomato vacuole 29.62 32.5
KRG97291 Soybean extracellular 8.61 32.38
PGSC0003DMT400016126 Potato plasma membrane, vacuole 29.87 32.15
KRH13793 Soybean nucleus 29.87 31.98
KRH47690 Soybean extracellular, vacuole 29.62 31.97
Bra014375.1-P Field mustard extracellular, vacuole 29.87 31.72
Bra030917.1-P Field mustard extracellular, vacuole 29.62 31.54
Bra039701.1-P Field mustard extracellular, plasma membrane 25.57 31.46
Bra030912.1-P Field mustard extracellular 35.44 31.46
Bra030913.1-P Field mustard cytosol 22.28 31.43
Bra027357.1-P Field mustard extracellular 29.62 31.37
KRH07083 Soybean extracellular 21.52 30.91
PGSC0003DMT400080416 Potato golgi, vacuole 28.1 30.66
VIT_09s0002g00570.t01 Wine grape extracellular 28.61 30.46
Bra027356.1-P Field mustard extracellular 28.61 30.21
KRG97292 Soybean extracellular 27.85 30.05
Solyc04g028470.1.1 Tomato cytosol 24.3 30.0
Solyc06g065010.2.1 Tomato nucleus 27.34 29.83
Solyc06g064960.2.1 Tomato extracellular 27.59 29.78
PGSC0003DMT400074599 Potato cytosol 24.81 29.61
Solyc11g051100.1.1 Tomato cytosol, extracellular 5.32 29.58
PGSC0003DMT400013272 Potato extracellular, vacuole 27.34 29.43
Solyc06g064990.2.1 Tomato extracellular 28.61 29.2
Solyc01g109020.1.1 Tomato extracellular 13.92 28.95
Bra030918.1-P Field mustard plastid 22.78 28.94
PGSC0003DMT400017106 Potato extracellular 27.09 28.92
Solyc06g064980.2.1 Tomato extracellular 27.59 28.46
KRH06260 Soybean cytosol, peroxisome 18.99 27.57
Solyc11g021040.1.1 Tomato extracellular 13.92 26.32
Bra007962.1-P Field mustard extracellular, vacuole 23.04 25.71
Solyc11g051120.1.1 Tomato cytosol 9.11 24.83
Solyc06g064970.2.1 Tomato extracellular, vacuole 22.28 24.58
Protein Annotations
EnsemblPlants:Bra030911.1EnsemblPlants:Bra030911.1-PEnsemblPlantsGene:Bra030911Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF461PFAM:PF00657SEG:segSignalP:SignalP-noTMUniParc:UPI000254561E
UniProt:M4EQ40MapMan:35.1::::
Description
AT1G54030 (E=4e-170) | GDSL-motif lipase, putative
Coordinates
chrA08:-:711345..713085
Molecular Weight (calculated)
43575.1 Da
IEP (calculated)
6.042
GRAVY (calculated)
-0.105
Length
395 amino acids
Sequence
(BLAST)
001: MANPTPHLFS LSFLSLLLLP HFPTVSLAQT LFVFGDGLYD AGNKQFVSSN RVDASFPPYG MTVGEPTGRW SDGRIVPDYL ASFMGVPHIP PILNGTADFS
101: HGANFAIADA TVLGSPPETL TFSQQVIKFS DNKNKWSAQA RSEAVYLFYI GSDDYLKFAK NNPNPSDDQK QAFVDRVITA IEAELKVIYG TGGRKFALHN
201: LAPLGCLPAV KQANGNVQEC VKLPSEMAEL HNKKLLQLLV ELSRQLSGFQ YSFYDFFSSI KHRVIKSKTY TFETGMAACC GTGSVNGTSC STNNVCSKPE
301: DYLFFDGKHL TQEGNLQVGH LMWGADPVVV GPNNLRELLF LPLNTTVMLA DIQEAMAAMS PKQNKIESLY DIKMMESEME NQWLYQDGKA VSFLI
Best Arabidopsis Sequence Match ( AT1G54030.1 )
(BLAST)
001: MLLIPSFTAN SNEPPPSKLS LSDLSMAILK SHFFLLFPLL LLHFHTVSFA QTLFVFGDGL YDAGNKQFLS QNRVDASFPP YGVTVGQATG RWSDGSIVPD
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
Arabidopsis Description
MVP1Inactive GDSL esterase/lipase-like protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA74]
SUBAcon: [vacuole,endoplasmic reticulum,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.