Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97291 | Soybean | extracellular | 27.27 | 71.43 |
| KRG94370 | Soybean | extracellular | 87.64 | 66.03 |
| KRG97292 | Soybean | extracellular | 76.73 | 57.65 |
| KRH69020 | Soybean | extracellular | 70.55 | 55.43 |
| Solyc01g109020.1.1 | Tomato | extracellular | 29.82 | 43.16 |
| VIT_09s0002g00530.t01 | Wine grape | cytosol | 50.91 | 40.7 |
| VIT_09s0002g00510.t01 | Wine grape | extracellular | 53.45 | 39.84 |
| Solyc11g021040.1.1 | Tomato | extracellular | 29.82 | 39.23 |
| KRH13794 | Soybean | nucleus | 51.64 | 38.48 |
| KRH13793 | Soybean | nucleus | 51.27 | 38.21 |
| KRH47690 | Soybean | extracellular, vacuole | 50.55 | 37.98 |
| VIT_09s0002g00540.t01 | Wine grape | extracellular | 53.45 | 37.31 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 48.73 | 37.02 |
| PGSC0003DMT400016123 | Potato | cytosol | 11.64 | 36.78 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 48.73 | 36.51 |
| Solyc06g065010.2.1 | Tomato | nucleus | 48.0 | 36.46 |
| Solyc06g064960.2.1 | Tomato | extracellular | 48.36 | 36.34 |
| Solyc11g051060.1.1 | Tomato | vacuole | 46.91 | 35.83 |
| VIT_09s0002g00520.t01 | Wine grape | extracellular | 40.73 | 35.11 |
| VIT_09s0002g00500.t01 | Wine grape | cytosol | 37.09 | 35.05 |
| Solyc06g064990.2.1 | Tomato | extracellular | 49.09 | 34.88 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 45.45 | 34.06 |
| Solyc06g064980.2.1 | Tomato | extracellular | 47.27 | 33.94 |
| KRH47692 | Soybean | extracellular, vacuole | 45.82 | 33.51 |
| KRH06261 | Soybean | extracellular, vacuole | 45.45 | 33.24 |
| PGSC0003DMT400017106 | Potato | extracellular | 44.0 | 32.7 |
| KRH06260 | Soybean | cytosol, peroxisome | 30.55 | 30.88 |
| KRH37563 | Soybean | vacuole | 44.0 | 29.73 |
| KRH12620 | Soybean | vacuole | 42.91 | 29.28 |
| KRH12619 | Soybean | endoplasmic reticulum, extracellular, vacuole | 41.45 | 28.72 |
| Solyc04g028470.1.1 | Tomato | cytosol | 32.73 | 28.12 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 36.36 | 27.93 |
| CDY54192 | Canola | extracellular | 13.45 | 27.61 |
| KRH37561 | Soybean | cytosol | 32.73 | 26.79 |
| PGSC0003DMT400074599 | Potato | cytosol | 32.0 | 26.59 |
| Bra027359.1-P | Field mustard | extracellular | 29.82 | 21.81 |
| CDX97555 | Canola | extracellular | 30.55 | 21.76 |
| CDY61480 | Canola | extracellular, vacuole | 30.91 | 21.57 |
| Bra037955.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 30.91 | 21.57 |
| CDY54197 | Canola | extracellular, vacuole | 30.91 | 21.52 |
| Bra030911.1-P | Field mustard | extracellular, vacuole | 30.91 | 21.52 |
| CDY36628 | Canola | cytosol | 29.82 | 21.41 |
| Bra037957.1-P | Field mustard | extracellular | 29.82 | 21.41 |
| CDY33240 | Canola | vacuole | 27.64 | 21.17 |
| AT3G14220.1 | Thale cress | vacuole | 27.64 | 20.94 |
| AT3G14210.1 | Thale cress | extracellular, golgi | 29.82 | 20.92 |
| CDY51412 | Canola | cytosol | 29.09 | 20.89 |
| Bra037954.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 29.09 | 20.89 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 29.09 | 20.78 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.27 | 20.78 |
| AT1G54020.2 | Thale cress | endoplasmic reticulum | 28.0 | 20.7 |
| CDY36623 | Canola | endoplasmic reticulum | 28.73 | 20.63 |
| Bra021542.1-P | Field mustard | vacuole | 26.91 | 20.61 |
| CDY39106 | Canola | vacuole | 26.91 | 20.61 |
| Bra014374.1-P | Field mustard | endoplasmic reticulum, vacuole | 28.73 | 20.52 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 28.73 | 20.52 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 28.73 | 20.36 |
| AT1G54010.1 | Thale cress | extracellular | 28.36 | 20.21 |
| Bra030915.1-P | Field mustard | extracellular | 28.36 | 20.21 |
| Bra027358.1-P | Field mustard | extracellular | 28.36 | 20.1 |
| CDX97556 | Canola | extracellular | 28.36 | 20.1 |
| CDY54588 | Canola | extracellular | 28.0 | 19.95 |
| Bra014371.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 28.0 | 19.79 |
| CDY54196 | Canola | extracellular | 28.0 | 19.79 |
| Bra014372.1-P | Field mustard | extracellular | 27.64 | 19.79 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.64 | 19.79 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 28.0 | 19.69 |
| CDY54591 | Canola | extracellular | 27.64 | 19.64 |
| Solyc11g051120.1.1 | Tomato | cytosol | 10.18 | 19.31 |
| CDY30680 | Canola | mitochondrion | 28.36 | 19.31 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 28.73 | 18.94 |
| Bra030913.1-P | Field mustard | cytosol | 18.18 | 17.86 |
| CDY54194 | Canola | cytosol | 18.18 | 17.86 |
| Bra030912.1-P | Field mustard | extracellular | 28.0 | 17.3 |
| CDY30676 | Canola | cytosol | 15.64 | 16.93 |
| CDY54198 | Canola | cytosol | 8.0 | 16.54 |
| CDY08214 | Canola | cytosol | 15.64 | 15.58 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 3.64 | 14.08 |
| CDY51410 | Canola | mitochondrion, plastid | 6.55 | 12.86 |
| CDY36625 | Canola | extracellular | 5.45 | 11.03 |
Protein Annotations
| EMBL:ACUP02009931 | EnsemblPlants:KRH07083 | EnsemblPlantsGene:GLYMA_16G066900 | Gene3D:3.40.50.1110 | InterPro:IPR036514 | InterPro:SGNH_hydro_sf |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF262 | ProteinID:KRH07083 | ProteinID:KRH07083.1 | SignalP:SignalP-TM | UniParc:UPI0006EE14B8 |
| UniProt:A0A0R0FWM5 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:6636803..6639454
Molecular Weight (calculated)
30333.1 Da
IEP (calculated)
6.856
GRAVY (calculated)
-0.072
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPKFISFC FLVLFVSSYG ITCCLSDIRH PKEHAAALFV FGDSLFDVGN NNYSNTTADN QANYSPYEKT NYGRFSDGRV IPDFIGKYAK LPLSPPYLFP
101: GFQGYVHGVI FASAGAGPLV ETHQGVVCFS LTENSSVFTA EKYVDMVVGN LTTVIKGIHK KGGRKFGVLN QSVLGCIPLV KAPVNGSEGS CVEEASALAK
201: LHNSVLSVEL EKRDYSFGGK RTVKDYELCE NPRDYVFFDS IHPTERVDQI ISQLIMWSGN QRITGPYNLK TLFEE
101: GFQGYVHGVI FASAGAGPLV ETHQGVVCFS LTENSSVFTA EKYVDMVVGN LTTVIKGIHK KGGRKFGVLN QSVLGCIPLV KAPVNGSEGS CVEEASALAK
201: LHNSVLSVEL EKRDYSFGGK RTVKDYELCE NPRDYVFFDS IHPTERVDQI ISQLIMWSGN QRITGPYNLK TLFEE
001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP
Arabidopsis Description
GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.