Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G54010.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT1G54010.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51410 | Canola | mitochondrion, plastid | 35.43 | 64.29 |
| Bra014372.1-P | Field mustard | extracellular | 94.49 | 62.5 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 94.09 | 62.24 |
| CDY54591 | Canola | extracellular | 88.19 | 57.88 |
| CDY54198 | Canola | cytosol | 28.74 | 54.89 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 79.92 | 52.73 |
| AT1G54010.1 | Thale cress | extracellular | 79.92 | 52.59 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 79.53 | 52.47 |
| AT1G54000.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 80.31 | 52.17 |
| CDY54196 | Canola | extracellular | 79.53 | 51.93 |
| CDY54588 | Canola | extracellular | 78.74 | 51.81 |
| CDY54194 | Canola | cytosol | 56.69 | 51.43 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 68.9 | 45.1 |
| CDX97556 | Canola | extracellular | 68.11 | 44.59 |
| CDX97555 | Canola | extracellular | 67.32 | 44.3 |
| CDY51412 | Canola | cytosol | 66.54 | 44.13 |
| CDY36623 | Canola | endoplasmic reticulum | 65.35 | 43.34 |
| CDY36628 | Canola | cytosol | 63.39 | 42.04 |
| CDY08214 | Canola | cytosol | 32.28 | 29.71 |
| CDY39106 | Canola | vacuole | 40.16 | 28.41 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 7.87 | 28.17 |
| CDY33240 | Canola | vacuole | 39.76 | 28.13 |
| CDY36625 | Canola | extracellular | 14.96 | 27.94 |
| PGSC0003DMT400016123 | Potato | cytosol | 9.45 | 27.59 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 30.32 | 21.33 |
| CDY61480 | Canola | extracellular, vacuole | 33.07 | 21.32 |
| CDY69407 | Canola | extracellular | 20.87 | 21.12 |
| CDY30680 | Canola | mitochondrion | 33.46 | 21.04 |
| CDY54197 | Canola | extracellular, vacuole | 32.68 | 21.01 |
| Solyc11g051060.1.1 | Tomato | vacuole | 26.77 | 18.89 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 27.17 | 18.8 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 26.77 | 18.58 |
| KRH06260 | Soybean | cytosol, peroxisome | 19.68 | 18.38 |
| KRH13794 | Soybean | nucleus | 26.38 | 18.16 |
| KRH13793 | Soybean | nucleus | 25.98 | 17.89 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 25.98 | 17.79 |
| CDX98432 | Canola | extracellular | 25.98 | 17.69 |
| CDX97557 | Canola | extracellular | 25.98 | 17.69 |
| CDY69208 | Canola | mitochondrion | 21.65 | 17.63 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 24.8 | 17.31 |
| Solyc11g051120.1.1 | Tomato | cytosol | 9.84 | 17.24 |
| KRH47690 | Soybean | extracellular, vacuole | 24.8 | 17.21 |
| Solyc04g028470.1.1 | Tomato | cytosol | 21.26 | 16.88 |
| KRG94370 | Soybean | extracellular | 24.02 | 16.71 |
| PGSC0003DMT400074599 | Potato | cytosol | 21.65 | 16.62 |
| PGSC0003DMT400017106 | Potato | extracellular | 24.02 | 16.49 |
| Solyc06g064960.2.1 | Tomato | extracellular | 23.62 | 16.39 |
| Solyc06g064980.2.1 | Tomato | extracellular | 24.41 | 16.19 |
| CDY36617 | Canola | plasma membrane | 22.05 | 16.18 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 23.23 | 16.08 |
| CDX98433 | Canola | extracellular, vacuole | 23.62 | 16.04 |
| CDX97558 | Canola | extracellular | 23.62 | 16.04 |
| KRH69020 | Soybean | extracellular | 22.05 | 16.0 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 23.23 | 15.9 |
| CDY02490 | Canola | extracellular, vacuole | 23.23 | 15.9 |
| Solyc06g065010.2.1 | Tomato | nucleus | 22.44 | 15.75 |
| KRH07083 | Soybean | extracellular | 16.93 | 15.64 |
| CDY24064 | Canola | plasma membrane | 22.44 | 15.16 |
| Solyc06g064990.2.1 | Tomato | extracellular | 22.83 | 14.99 |
| KRG97292 | Soybean | extracellular | 21.26 | 14.75 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 20.87 | 14.64 |
| CDY30674 | Canola | extracellular, vacuole | 21.26 | 14.52 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 15.75 | 11.17 |
| CDX75755 | Canola | plastid | 15.75 | 9.32 |
| CDY71922 | Canola | extracellular, plasma membrane | 5.12 | 5.86 |
| CDY54192 | Canola | extracellular | 2.76 | 5.22 |
| Solyc11g021040.1.1 | Tomato | extracellular | 3.94 | 4.78 |
| KRG97291 | Soybean | extracellular | 1.97 | 4.76 |
| Solyc01g109020.1.1 | Tomato | extracellular | 3.54 | 4.74 |
| CDY25680 | Canola | extracellular, plasma membrane | 2.76 | 4.19 |
| CDY02491 | Canola | plastid | 2.76 | 4.12 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 0.39 | 0.76 |
Protein Annotations
| EnsemblPlants:CDY30676 | EnsemblPlantsGene:GSBRNA2T00046003001 | Gene3D:3.40.50.1110 | GO:A0A078GYV1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF331 | PFAM:PF00657 | ProteinID:CDY30676 | ProteinID:CDY30676.1 | SEG:seg | SUPFAM:SSF52266 |
| UniParc:UPI0004EB3965 | UniProt:A0A078GYV1 | MapMan:35.1 | : | : | : |
Description
BnaC06g10400DBnaC06g10400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYV1]
Coordinates
chrLK032257:-:425527..426378
Molecular Weight (calculated)
29003.1 Da
IEP (calculated)
6.931
GRAVY (calculated)
-0.372
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHPDSRHIN NWNEDFVKKT LFMIYIGAND YLNFTKNNPI ADASAQQAFV TSVTNKLKND ISLLYASGAS KFVIQTLAPL GCLPIVRQDY NTGMDQCHET
101: LNNFAKQHNE KIGPMLNEMA RTAPGFQFTV FDFYNVILRR TQRSLNYRFL VTYSSCCGVG THNAYGCGFP NVYSKLCEYQ RSYLFFDGRH NTEKAQESFG
201: HLLFGADPNV IQPMINVREL VTYPVDEPMR EFWLPTTSSA SDSTSSSSHG YEFY
101: LNNFAKQHNE KIGPMLNEMA RTAPGFQFTV FDFYNVILRR TQRSLNYRFL VTYSSCCGVG THNAYGCGFP NVYSKLCEYQ RSYLFFDGRH NTEKAQESFG
201: HLLFGADPNV IQPMINVREL VTYPVDEPMR EFWLPTTSSA SDSTSSSSHG YEFY
001: MMANNCNLVS VLCVILVLTL FHNPITVAGQ NSPVVALFTF GDSNFDAGNK QTLTKTLVAQ GFWPYGKSRD DPNGKFSDGL ITPDFLAKFM KIPLAIAPAL
101: QPNVNVSRGA SFAVEGATLL GAPVESMTLN QQVKKFNQMK AANWNDDFVA KSVFMIYIGA NDYLNFTKNN PTADASAQQA FVTSVTNKLK NDISALYSSG
201: ASKFVIQTLA PLGCLPIVRQ EYNTGMDQCY EKLNDLAKQH NEKIGPMLNE MARNSPASAP FQFTVFDFYN AVLTRTQRNQ NFRFFVTNAS CCGVGSHDAY
301: GCGLPNVHSK LCEYQRSFLF FDGRHNSEKA QEMFAHLLFG ADTNVVQPMN VRELTVYPVD EPMREFWVPP TPATVHASDS SSSTSRGYEY Y
101: QPNVNVSRGA SFAVEGATLL GAPVESMTLN QQVKKFNQMK AANWNDDFVA KSVFMIYIGA NDYLNFTKNN PTADASAQQA FVTSVTNKLK NDISALYSSG
201: ASKFVIQTLA PLGCLPIVRQ EYNTGMDQCY EKLNDLAKQH NEKIGPMLNE MARNSPASAP FQFTVFDFYN AVLTRTQRNQ NFRFFVTNAS CCGVGSHDAY
301: GCGLPNVHSK LCEYQRSFLF FDGRHNSEKA QEMFAHLLFG ADTNVVQPMN VRELTVYPVD EPMREFWVPP TPATVHASDS SSSTSRGYEY Y
Arabidopsis Description
GLL22GDSL esterase/lipase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q1H583]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.