Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36625 | Canola | extracellular | 43.84 | 88.97 |
| Bra014371.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 99.64 | 70.69 |
| CDY30680 | Canola | mitochondrion | 96.01 | 65.59 |
| CDY61480 | Canola | extracellular, vacuole | 86.59 | 60.66 |
| CDY54197 | Canola | extracellular, vacuole | 86.59 | 60.51 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 76.81 | 58.73 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 81.88 | 54.2 |
| PGSC0003DMT400016123 | Potato | cytosol | 11.23 | 35.63 |
| CDY30676 | Canola | cytosol | 29.71 | 32.28 |
| CDY51410 | Canola | mitochondrion, plastid | 15.22 | 30.0 |
| CDY69407 | Canola | extracellular | 27.17 | 29.88 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 7.61 | 29.58 |
| CDY54198 | Canola | cytosol | 11.96 | 24.81 |
| CDY54194 | Canola | cytosol | 25.0 | 24.64 |
| CDY39106 | Canola | vacuole | 31.52 | 24.23 |
| CDY33240 | Canola | vacuole | 31.52 | 24.23 |
| CDY69208 | Canola | mitochondrion | 27.17 | 24.04 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 32.97 | 23.64 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 32.61 | 23.38 |
| CDY54591 | Canola | extracellular | 32.61 | 23.26 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.25 | 23.18 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 30.07 | 22.68 |
| CDY54196 | Canola | extracellular | 31.88 | 22.62 |
| CDY54588 | Canola | extracellular | 31.52 | 22.54 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 31.52 | 22.42 |
| CDX97556 | Canola | extracellular | 31.16 | 22.16 |
| Solyc11g051120.1.1 | Tomato | cytosol | 11.59 | 22.07 |
| KRH06260 | Soybean | cytosol, peroxisome | 21.74 | 22.06 |
| CDX97555 | Canola | extracellular | 30.07 | 21.5 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 28.26 | 21.43 |
| KRH13794 | Soybean | nucleus | 28.62 | 21.41 |
| Solyc11g051060.1.1 | Tomato | vacuole | 27.54 | 21.11 |
| CDY36617 | Canola | plasma membrane | 26.45 | 21.1 |
| KRH47690 | Soybean | extracellular, vacuole | 27.9 | 21.04 |
| CDX98432 | Canola | extracellular | 28.26 | 20.91 |
| CDX97557 | Canola | extracellular | 28.26 | 20.91 |
| CDY36628 | Canola | cytosol | 28.99 | 20.89 |
| KRH13793 | Soybean | nucleus | 27.9 | 20.87 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 27.54 | 20.71 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 27.54 | 20.49 |
| KRG94370 | Soybean | extracellular | 26.81 | 20.27 |
| CDY02490 | Canola | extracellular, vacuole | 27.17 | 20.22 |
| CDY51412 | Canola | cytosol | 27.9 | 20.1 |
| KRH69020 | Soybean | extracellular | 25.36 | 20.0 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 26.81 | 19.95 |
| CDY30674 | Canola | extracellular, vacuole | 26.81 | 19.89 |
| CDY36623 | Canola | endoplasmic reticulum | 27.54 | 19.84 |
| CDY24064 | Canola | plasma membrane | 26.81 | 19.68 |
| Solyc06g064960.2.1 | Tomato | extracellular | 25.72 | 19.4 |
| Solyc04g028470.1.1 | Tomato | cytosol | 22.46 | 19.38 |
| PGSC0003DMT400074599 | Potato | cytosol | 23.19 | 19.34 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 25.0 | 18.8 |
| Solyc06g064980.2.1 | Tomato | extracellular | 26.09 | 18.8 |
| PGSC0003DMT400017106 | Potato | extracellular | 25.0 | 18.65 |
| Solyc06g064990.2.1 | Tomato | extracellular | 26.09 | 18.6 |
| KRG97292 | Soybean | extracellular | 24.64 | 18.58 |
| CDX97558 | Canola | extracellular | 24.64 | 18.18 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 23.55 | 17.96 |
| CDX98433 | Canola | extracellular, vacuole | 24.28 | 17.91 |
| Solyc06g065010.2.1 | Tomato | nucleus | 22.83 | 17.4 |
| KRH07083 | Soybean | extracellular | 15.58 | 15.64 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 16.67 | 12.85 |
| CDX75755 | Canola | plastid | 17.75 | 11.42 |
| Solyc11g021040.1.1 | Tomato | extracellular | 6.16 | 8.13 |
| Solyc01g109020.1.1 | Tomato | extracellular | 5.07 | 7.37 |
| CDY71922 | Canola | extracellular, plasma membrane | 5.07 | 6.31 |
| CDY25680 | Canola | extracellular, plasma membrane | 1.45 | 2.4 |
| CDY02491 | Canola | plastid | 1.45 | 2.35 |
| KRG97291 | Soybean | extracellular | 0.72 | 1.9 |
| CDY54192 | Canola | extracellular | 0.36 | 0.75 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078F573 | UniProt:A0A078F573 | EnsemblPlants:CDY08214 | ProteinID:CDY08214 |
| ProteinID:CDY08214.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | GO:GO:0016788 |
| EnsemblPlantsGene:GSBRNA2T00125528001 | InterPro:IPR036514 | PFAM:PF00657 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF461 | InterPro:SGNH_hydro_sf |
| UniParc:UPI0004EEAC74 | SEG:seg | : | : | : | : |
Description
BnaA05g14050DBnaA05g14050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F573]
Coordinates
chrLK031984:+:130427..131633
Molecular Weight (calculated)
30891.9 Da
IEP (calculated)
6.278
GRAVY (calculated)
-0.250
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLSQQVIKF SENKNKWTAK ARSEAIYLFY IASDDYLNYA KNNPNPSDDQ KQAFVGRVIA AIEAELKVLY GSGGRKFAFQ NLAPLGCLPS VKQANGNVQE
101: CARLPSEMAE LHNKKLLQLL VELSRQLSGF QYSFYDFFSS IQNRVIKSKT YTFETGMAAC CGTGSVNGTS CSTSNVCAKP EDYLFFDGKH LTQEGNLQVG
201: HLIWGSDPEV VGPNNLRELL FLPLDITATL ANIQEAMAAT MPRQIKIESL YDIKKMESEM ENQWLYQVDK ATSFLI
101: CARLPSEMAE LHNKKLLQLL VELSRQLSGF QYSFYDFFSS IQNRVIKSKT YTFETGMAAC CGTGSVNGTS CSTSNVCAKP EDYLFFDGKH LTQEGNLQVG
201: HLIWGSDPEV VGPNNLRELL FLPLDITATL ANIQEAMAAT MPRQIKIESL YDIKKMESEM ENQWLYQVDK ATSFLI
001: MLLIPSFTAN SNEPPPSKLS LSDLSMAILK SHFFLLFPLL LLHFHTVSFA QTLFVFGDGL YDAGNKQFLS QNRVDASFPP YGVTVGQATG RWSDGSIVPD
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
Arabidopsis Description
MVP1Inactive GDSL esterase/lipase-like protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA74]
SUBAcon: [nucleus,endoplasmic reticulum,vacuole]
SUBAcon: [nucleus,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.