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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97556 Canola extracellular 96.91 96.91
CDX97555 Canola extracellular 82.99 83.42
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 68.81 69.53
CDY54591 Canola extracellular 68.81 68.99
CDY30676 Canola cytosol 45.1 68.9
CDY30675 Canola endoplasmic reticulum, vacuole 67.78 68.31
CDY08211 Canola endoplasmic reticulum, vacuole 67.78 68.31
CDY54588 Canola extracellular 65.72 66.06
CDY51412 Canola cytosol 64.69 65.54
CDY54196 Canola extracellular 65.46 65.3
CDY36623 Canola endoplasmic reticulum 64.18 65.01
CDY54192 Canola extracellular 22.42 64.93
CDY36628 Canola cytosol 62.37 63.19
CDY54194 Canola cytosol 42.78 59.29
CDY51410 Canola mitochondrion, plastid 20.88 57.86
CDY54198 Canola cytosol 16.75 48.87
CDY33240 Canola vacuole 41.75 45.13
CDY39106 Canola vacuole 41.24 44.57
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 31.96 34.35
CDY61480 Canola extracellular, vacuole 34.54 34.01
CDY54197 Canola extracellular, vacuole 34.54 33.92
CDY30680 Canola mitochondrion 35.05 33.66
CDY09515 Canola endoplasmic reticulum, extracellular, golgi 10.82 32.06
CDY08214 Canola cytosol 22.42 31.52
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 28.87 30.6
KRH07083 Soybean extracellular 20.36 28.73
KRG97291 Soybean extracellular 7.73 28.57
KRH13794 Soybean nucleus 27.06 28.46
CDX98432 Canola extracellular 27.32 28.42
CDX97557 Canola extracellular 27.32 28.42
CDX97558 Canola extracellular 27.32 28.34
CDX98433 Canola extracellular, vacuole 27.32 28.34
VIT_09s0002g00570.t01 Wine grape extracellular 27.06 28.3
VIT_09s0002g00550.t01 Wine grape extracellular 26.55 28.3
PGSC0003DMT400016126 Potato plasma membrane, vacuole 26.55 28.07
Solyc11g051060.1.1 Tomato vacuole 26.03 28.06
KRH69020 Soybean extracellular 25.26 28.0
KRG94370 Soybean extracellular 26.29 27.95
KRH13793 Soybean nucleus 26.55 27.91
KRH47690 Soybean extracellular, vacuole 26.29 27.87
CDY36619 Canola endoplasmic reticulum, plasma membrane 26.03 27.22
PGSC0003DMT400074599 Potato cytosol 23.2 27.19
CDY25680 Canola extracellular, plasma membrane 11.6 26.95
CDY02491 Canola plastid 11.6 26.47
PGSC0003DMT400016123 Potato cytosol 5.93 26.44
CDY02490 Canola extracellular, vacuole 25.26 26.42
CDY24064 Canola plasma membrane 25.52 26.33
Solyc04g028470.1.1 Tomato cytosol 21.65 26.25
KRG97292 Soybean extracellular 24.74 26.23
Solyc06g064980.2.1 Tomato extracellular 25.77 26.11
CDY36617 Canola plasma membrane 22.94 25.72
PGSC0003DMT400013272 Potato extracellular, vacuole 24.23 25.61
Solyc06g065010.2.1 Tomato nucleus 23.71 25.41
CDY30674 Canola extracellular, vacuole 24.23 25.27
Solyc06g064960.2.1 Tomato extracellular 23.71 25.14
CDY36625 Canola extracellular 8.76 25.0
KRH06260 Soybean cytosol, peroxisome 17.27 24.63
PGSC0003DMT400080416 Potato golgi, vacuole 22.94 24.59
CDY71922 Canola extracellular, plasma membrane 13.92 24.32
PGSC0003DMT400017106 Potato extracellular 23.2 24.32
CDY69407 Canola extracellular 15.72 24.3
Solyc06g064990.2.1 Tomato extracellular 24.23 24.29
Solyc11g051100.1.1 Tomato cytosol, extracellular 4.38 23.94
CDY69208 Canola mitochondrion 19.07 23.72
Solyc01g109020.1.1 Tomato extracellular 11.08 22.63
Solyc06g064970.2.1 Tomato extracellular, vacuole 20.62 22.35
Solyc11g021040.1.1 Tomato extracellular 11.34 21.05
Solyc11g051120.1.1 Tomato cytosol 7.22 19.31
CDX75755 Canola plastid 19.85 17.95
Protein Annotations
EnsemblPlants:CDX98428EnsemblPlantsGene:GSBRNA2T00106030001Gene3D:3.40.50.1110GO:A0A078EGE2GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF485PFAM:PF00657ProteinID:CDX98428ProteinID:CDX98428.1SEG:seg
SUPFAM:SSF52266TMHMM:TMhelixUniParc:UPI0004EB3E43MapMan:9.5.2.4::
Description
BnaC05g39470D
Coordinates
chrLK031905:+:35425..37509
Molecular Weight (calculated)
42949.3 Da
IEP (calculated)
7.232
GRAVY (calculated)
-0.148
Length
388 amino acids
Sequence
(BLAST)
001: MVGKCDLVSV IGAILVLTIF HNPIIVYAGQ GVPEVALFTF GDSYYDAGNK AFLSKNKNLP QTLWPYGKSL DDPNGKFSDG HIVPDFIGDF ISIPNGIPPA
101: LKPGANLSRG ASFAVADASI LGAPVESMTL NQQVNKFRSM KSNWTDDYIE KSLFMIYIGT EDYLNFTKTN PTADASAQQA FVISVTNKLK NDIGLLYSLG
201: ASKFMVQLLA PLGCLPIVRQ EHGTGNDCYE PLNDLAKQHN EKIGPMLNQF AKSPGFQFTV FDFYNAILRR TQRPHNYRFY IANSSCCGVG THTAYGCGMG
301: NVHSKLCEYQ RSYLFFDGRH NTEKAQEELA HLIYGADTNV IQPMTVRELI VFPAGENMLE SWEPNLSSVR RRSSTKSTSV YRLLDLIG
Best Arabidopsis Sequence Match ( AT3G14210.1 )
(BLAST)
001: MADNLNLVSV LGVLLVLTIF HNPIIVYAGE GVPNVALFTF GDSYYDAGNK VFLSQRKDLP QTYWPYGKSR DYPNGKFSDG HIVPDFIADF ISIPNGVLPP
101: VLKPGVDISR GVSFAVADAS ILGAPVESMT LNQQVVKFKN MKSNWNDSYI EKSLFMIYIG TEDYLNFTKA NPNADASAQQ AFVTNVINRL KNDIKLLYSL
201: GASKFVVQLL APLGCLPIVR QEYKTGNECY ELLNDLAKQH NGKIGPMLNE FAKISTSPYG FQFTVFDFYN AVLRRIATGR SLNYRFFVTN TSCCGVGTHN
301: AYGCGKGNVH SKLCEYQRSY FFFDGRHNTE KAQEEMAHLL YGADPDVVQP MTVRELIVYP TGETMREYWE PNNLAIRRRP SRDFYLGLAA YY
Arabidopsis Description
ESM1GDSL esterase/lipase ESM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJG3]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.