Factsheet for Solyc04g028470.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g081170.1.1
Solyc01g109020.1.1
Solyc04g008430.1.1
Solyc04g028470.1.1
Solyc06g064960.2.1
Solyc06g064970.2.1
Solyc06g064980.2.1
Solyc06g064990.2.1
Solyc06g065010.2.1
Solyc11g021040.1.1
Solyc11g051060.1.1
Solyc11g051100.1.1
Solyc11g051120.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54010.1	Solyc04g008430.1.1	AT2G01950.1	19000166
AT1G54030.1	Solyc01g081170.1.1	AT1G52400.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc01g081170.1.1	AT3G09260.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc01g081170.1.1	AT3G21370.1	23155454
AT3G14220.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074599	Potato	cytosol	87.19	84.29
VIT_09s0002g00530.t01	Wine grape	cytosol	44.38	41.28
Solyc11g051060.1.1	Tomato	vacuole	45.62	40.56
VIT_09s0002g00500.t01	Wine grape	cytosol	36.88	40.55
Solyc01g109020.1.1	Tomato	extracellular	23.75	40.0
KRH69020	Soybean	extracellular	42.81	39.14
Solyc06g065010.2.1	Tomato	nucleus	43.75	38.67
VIT_09s0002g00510.t01	Wine grape	extracellular	44.06	38.21
KRG97291	Soybean	extracellular	12.5	38.1
Solyc11g051100.1.1	Tomato	cytosol, extracellular	8.44	38.03
KRH06260	Soybean	cytosol, peroxisome	32.19	37.87
KRG97292	Soybean	extracellular	43.12	37.7
Solyc06g064960.2.1	Tomato	extracellular	43.12	37.7
Solyc12g049550.1.1	Tomato	extracellular	42.81	37.53
KRH47690	Soybean	extracellular, vacuole	42.5	37.16
Solyc11g021040.1.1	Tomato	extracellular	24.06	36.84
VIT_09s0002g00540.t01	Wine grape	extracellular	45.31	36.8
KRH13793	Soybean	nucleus	41.88	36.31
KRG94370	Soybean	extracellular	41.25	36.16
VIT_09s0002g00520.t01	Wine grape	extracellular	35.94	36.05
KRH13794	Soybean	nucleus	41.56	36.04
Solyc06g064990.2.1	Tomato	extracellular	43.44	35.92
Bra039701.1-P	Field mustard	extracellular, plasma membrane	35.62	35.51
Solyc06g064980.2.1	Tomato	extracellular	42.5	35.51
CDX97558	Canola	extracellular	40.31	34.49
CDX98433	Canola	extracellular, vacuole	40.31	34.49
Bra027356.1-P	Field mustard	extracellular	40.31	34.49
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	39.38	34.43
CDY24064	Canola	plasma membrane	40.31	34.31
VIT_09s0002g00550.t01	Wine grape	extracellular	38.44	33.79
AT5G40990.1	Thale cress	plasma membrane	39.38	33.69
AT1G53940.2	Thale cress	plasma membrane	39.38	33.51
Bra014375.1-P	Field mustard	extracellular, vacuole	38.75	33.33
CDY30674	Canola	extracellular, vacuole	38.44	33.06
CDY36617	Canola	plasma membrane	35.62	32.95
CDY36619	Canola	endoplasmic reticulum, plasma membrane	38.12	32.88
Bra030916.1-P	Field mustard	plastid	37.19	32.78
KRH07083	Soybean	extracellular	28.12	32.73
CDY02490	Canola	extracellular, vacuole	37.81	32.61
Bra030917.1-P	Field mustard	extracellular, vacuole	37.81	32.61
VIT_09s0002g00570.t01	Wine grape	extracellular	37.5	32.34
AT1G53970.2	Thale cress	cytosol	9.69	31.96
AT1G53990.1	Thale cress	extracellular, plasma membrane	36.56	31.88
Solyc06g064970.2.1	Tomato	extracellular, vacuole	34.69	31.01
AT3G14225.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	36.25	30.77
CDY69208	Canola	mitochondrion	29.69	30.45
CDY69407	Canola	extracellular	23.75	30.28
Bra027357.1-P	Field mustard	extracellular	34.69	29.76
CDX97557	Canola	extracellular	34.38	29.49
CDX98432	Canola	extracellular	34.06	29.22
CDY71922	Canola	extracellular, plasma membrane	19.06	27.48
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	28.75	25.48
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	30.31	24.62
CDY33240	Canola	vacuole	27.5	24.51
Solyc04g007570.1.1	Tomato	extracellular, plasma membrane, vacuole	27.81	24.38
CDY61480	Canola	extracellular, vacuole	30.0	24.37
Bra030911.1-P	Field mustard	extracellular, vacuole	30.0	24.3
CDY54197	Canola	extracellular, vacuole	30.0	24.3
AT3G14220.1	Thale cress	vacuole	27.19	23.97
CDY39106	Canola	vacuole	26.88	23.96
Bra021542.1-P	Field mustard	vacuole	26.88	23.96
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	28.75	23.65
Bra027359.1-P	Field mustard	extracellular	26.88	22.87
CDY30680	Canola	mitochondrion	28.75	22.77
CDY08214	Canola	cytosol	19.38	22.46
CDY54192	Canola	extracellular	9.38	22.39
CDX97555	Canola	extracellular	26.88	22.28
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	26.56	22.08
CDY30675	Canola	endoplasmic reticulum, vacuole	26.56	22.08
CDY08211	Canola	endoplasmic reticulum, vacuole	26.56	22.08
Bra030915.1-P	Field mustard	extracellular	26.56	22.02
AT1G54010.1	Thale cress	extracellular	26.25	21.76
Bra027358.1-P	Field mustard	extracellular	26.25	21.65
CDX97556	Canola	extracellular	26.25	21.65
CDX98428	Canola	extracellular, plasma membrane, vacuole	26.25	21.65
AT1G54030.1	Thale cress	endoplasmic reticulum, nucleus, vacuole	28.12	21.58
Solyc11g051120.1.1	Tomato	cytosol	9.69	21.38
CDY36625	Canola	extracellular	9.06	21.32
CDY30676	Canola	cytosol	16.88	21.26
AT1G54000.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	25.62	20.97
CDY54591	Canola	extracellular	25.31	20.93
Bra014372.1-P	Field mustard	extracellular	25.0	20.83
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	25.0	20.83
CDX75755	Canola	plastid	27.5	20.51
AT1G54020.2	Thale cress	endoplasmic reticulum	23.75	20.43
AT3G14210.1	Thale cress	extracellular, golgi	25.0	20.41
Bra037957.1-P	Field mustard	extracellular	24.38	20.37
CDY36628	Canola	cytosol	24.06	20.1
CDY51412	Canola	cytosol	23.75	19.84
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	23.75	19.84
CDY54588	Canola	extracellular	23.75	19.69
Bra030913.1-P	Field mustard	cytosol	17.19	19.64
CDY54194	Canola	cytosol	17.19	19.64
CDY36623	Canola	endoplasmic reticulum	23.44	19.58
CDY54196	Canola	extracellular	23.75	19.54
CDY54198	Canola	cytosol	7.5	18.05
CDY51410	Canola	mitochondrion, plastid	7.81	17.86
Bra030912.1-P	Field mustard	extracellular	23.75	17.08

Protein Annotations

EnsemblPlants:Solyc04g028470.1.1	EnsemblPlantsGene:Solyc04g028470.1	Gene3D:3.40.50.1110	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF262	UniParc:UPI0002765E4E	UniProt:K4BR88	MapMan:35.1	:

Description

No Description!

Coordinates

chr4:+:15556121..15559155

Molecular Weight (calculated)

36343.4 Da

IEP (calculated)

7.787

GRAVY (calculated)

-0.278

Length

320 amino acids

Sequence
(BLAST)

001: MFDPGNNNYI MNPSAYKANF EPYGISYFKY PTGRFSDGRR LPDFITEFAN LPTIPAFYQA LHNHYINHGV NFASAGAGCL DETYREKKKV DGTTREKGSK
101: ALLSNAVYLF IIGNNDYLRL YDIPDIPSDS SCLSYTTEHE YMNMVMDSLV TVMMEIYKLA GRKFGIQDLL PLGCLPRFRG LALLKKGPHS DCLDELNSVV
201: KKHNLALSRK FKQLKKELRG FEYSFFSIFD ALKELYENPS THGFKEAKAA CCGFGPYRGF GSCGMAEAYE LCENVKEHVI FDFYHPTGKA FHHFAQLWWQ
301: GNSNVVESQS LKSLLALLFA

Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)

001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP

Arabidopsis Description

GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.