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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 4
  • vacuole 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014375.1-P Field mustard extracellular, vacuole 98.12 98.12
CDY02490 Canola extracellular, vacuole 77.96 78.17
CDY36619 Canola endoplasmic reticulum, plasma membrane 77.69 77.9
CDY69407 Canola extracellular 51.61 76.49
CDY69208 Canola mitochondrion 61.02 72.76
AT1G53990.1 Thale cress extracellular, plasma membrane 71.77 72.75
CDY24064 Canola plasma membrane 71.24 70.48
CDY36617 Canola plasma membrane 63.98 68.79
CDX98432 Canola extracellular 60.22 60.05
CDX97557 Canola extracellular 60.22 60.05
CDX98433 Canola extracellular, vacuole 59.68 59.36
CDX97558 Canola extracellular 59.41 59.09
CDY71922 Canola extracellular, plasma membrane 33.06 55.41
Solyc11g021040.1.1 Tomato extracellular 27.69 49.28
PGSC0003DMT400080416 Potato golgi, vacuole 47.04 48.34
CDY25680 Canola extracellular, plasma membrane 21.51 47.9
Solyc01g109020.1.1 Tomato extracellular 24.46 47.89
Solyc11g051060.1.1 Tomato vacuole 46.24 47.78
PGSC0003DMT400016126 Potato plasma membrane, vacuole 47.04 47.68
Solyc06g065010.2.1 Tomato nucleus 46.24 47.51
CDY02491 Canola plastid 21.51 47.06
Solyc06g064960.2.1 Tomato extracellular 44.35 45.08
Solyc06g064990.2.1 Tomato extracellular 46.77 44.96
PGSC0003DMT400013272 Potato extracellular, vacuole 43.01 43.6
Solyc06g064980.2.1 Tomato extracellular 44.09 42.82
Solyc11g051100.1.1 Tomato cytosol, extracellular 8.06 42.25
PGSC0003DMT400074599 Potato cytosol 36.29 40.79
PGSC0003DMT400017106 Potato extracellular 40.32 40.54
PGSC0003DMT400016123 Potato cytosol 9.41 40.23
CDX75755 Canola plastid 44.35 38.46
Solyc04g028470.1.1 Tomato cytosol 33.06 38.44
Solyc06g064970.2.1 Tomato extracellular, vacuole 34.68 36.03
CDY09515 Canola endoplasmic reticulum, extracellular, golgi 11.83 33.59
CDY54192 Canola extracellular 11.02 30.6
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 29.3 30.19
CDY61480 Canola extracellular, vacuole 31.18 29.44
CDY54197 Canola extracellular, vacuole 31.18 29.37
CDY30680 Canola mitochondrion 30.65 28.22
CDY33240 Canola vacuole 26.34 27.3
CDY08214 Canola cytosol 19.89 26.81
CDY08211 Canola endoplasmic reticulum, vacuole 27.42 26.49
CDY30675 Canola endoplasmic reticulum, vacuole 27.42 26.49
CDY51410 Canola mitochondrion, plastid 9.95 26.43
CDY39106 Canola vacuole 25.27 26.18
CDY54591 Canola extracellular 26.88 25.84
CDY36628 Canola cytosol 26.34 25.59
Solyc11g051120.1.1 Tomato cytosol 9.95 25.52
CDY36625 Canola extracellular 9.14 25.0
CDY54588 Canola extracellular 25.54 24.61
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 25.27 24.48
CDY54196 Canola extracellular 25.54 24.42
CDY51412 Canola cytosol 25.0 24.28
CDX98428 Canola extracellular, plasma membrane, vacuole 25.27 24.23
CDX97556 Canola extracellular 25.27 24.23
CDX97555 Canola extracellular 24.73 23.83
CDY36623 Canola endoplasmic reticulum 23.92 23.24
CDY54194 Canola cytosol 17.2 22.86
CDY54198 Canola cytosol 8.06 22.56
CDY30676 Canola cytosol 14.52 21.26
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1GO:A0A078GZS1UniProt:A0A078GZS1EnsemblPlants:CDY30674ProteinID:CDY30674
ProteinID:CDY30674.1ncoils:CoilInterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788EnsemblPlantsGene:GSBRNA2T00045998001InterPro:IPR036514PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF301
InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266SignalP:SignalP-noTMUniParc:UPI0004EB16B0SEG:seg
Description
BnaC06g10380DBnaC06g10380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZS1]
Coordinates
chrLK032257:+:387066..389556
Molecular Weight (calculated)
41210.3 Da
IEP (calculated)
8.990
GRAVY (calculated)
-0.146
Length
372 amino acids
Sequence
(BLAST)
001: MEKCRLVSII LFVHTIILSI SSINCTENNS KLVTNQAALF VFGDSLFDPG NNNYINTTNR ANFFPYGQTF FKFPTGRVSD GRLIPDFIAE KAWLPLIPPN
101: LQPSNSNSQF TYGVSFASAG AGALVESFSG QVIDLGTQLK SFKNVKRRLR SALGEAETKR IFSRAVYLFN IGGNDLFYAL FQTSSLVNLN AKQKLVDLII
201: GNTTSVVEEV YKMGGRKFGF LNVGAYDCAP GASILDTANI GSCNKPVTEL IDLHNKKFPD GLRRLQRELS GFKYALHDYR TSLLDRINNP SKYGFKEGNK
301: ACCGSGPLRG MPTCGINQTG LSYELCEDVT NYLFFDSAHL TEKAHRQFAE LIWSGPRNVT GPYNLKALFE LN
Best Arabidopsis Sequence Match ( AT1G53990.1 )
(BLAST)
001: MVRLVLIIFF VYTIILSIGS INCIDNNNLV TNQAALFVFG DSLFDAGNNN YINTVSSFRS NIWPYGQTNF KFPTGRLSDG PEKAWLPSIP PNLQPNNGNN
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT
Arabidopsis Description
GLIP3GDSL esterase/lipase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF5]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.