Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 5
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra014375.1-P | Field mustard | extracellular, vacuole | 98.12 | 98.12 |
CDY02490 | Canola | extracellular, vacuole | 77.96 | 78.17 |
CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 77.69 | 77.9 |
CDY69407 | Canola | extracellular | 51.61 | 76.49 |
CDY69208 | Canola | mitochondrion | 61.02 | 72.76 |
AT1G53990.1 | Thale cress | extracellular, plasma membrane | 71.77 | 72.75 |
CDY24064 | Canola | plasma membrane | 71.24 | 70.48 |
CDY36617 | Canola | plasma membrane | 63.98 | 68.79 |
CDX98432 | Canola | extracellular | 60.22 | 60.05 |
CDX97557 | Canola | extracellular | 60.22 | 60.05 |
CDX98433 | Canola | extracellular, vacuole | 59.68 | 59.36 |
CDX97558 | Canola | extracellular | 59.41 | 59.09 |
CDY71922 | Canola | extracellular, plasma membrane | 33.06 | 55.41 |
Solyc11g021040.1.1 | Tomato | extracellular | 27.69 | 49.28 |
PGSC0003DMT400080416 | Potato | golgi, vacuole | 47.04 | 48.34 |
CDY25680 | Canola | extracellular, plasma membrane | 21.51 | 47.9 |
Solyc01g109020.1.1 | Tomato | extracellular | 24.46 | 47.89 |
Solyc11g051060.1.1 | Tomato | vacuole | 46.24 | 47.78 |
PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 47.04 | 47.68 |
Solyc06g065010.2.1 | Tomato | nucleus | 46.24 | 47.51 |
CDY02491 | Canola | plastid | 21.51 | 47.06 |
Solyc06g064960.2.1 | Tomato | extracellular | 44.35 | 45.08 |
Solyc06g064990.2.1 | Tomato | extracellular | 46.77 | 44.96 |
PGSC0003DMT400013272 | Potato | extracellular, vacuole | 43.01 | 43.6 |
Solyc06g064980.2.1 | Tomato | extracellular | 44.09 | 42.82 |
Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 8.06 | 42.25 |
PGSC0003DMT400074599 | Potato | cytosol | 36.29 | 40.79 |
PGSC0003DMT400017106 | Potato | extracellular | 40.32 | 40.54 |
PGSC0003DMT400016123 | Potato | cytosol | 9.41 | 40.23 |
CDX75755 | Canola | plastid | 44.35 | 38.46 |
Solyc04g028470.1.1 | Tomato | cytosol | 33.06 | 38.44 |
Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 34.68 | 36.03 |
CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 11.83 | 33.59 |
CDY54192 | Canola | extracellular | 11.02 | 30.6 |
CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 29.3 | 30.19 |
CDY61480 | Canola | extracellular, vacuole | 31.18 | 29.44 |
CDY54197 | Canola | extracellular, vacuole | 31.18 | 29.37 |
CDY30680 | Canola | mitochondrion | 30.65 | 28.22 |
CDY33240 | Canola | vacuole | 26.34 | 27.3 |
CDY08214 | Canola | cytosol | 19.89 | 26.81 |
CDY08211 | Canola | endoplasmic reticulum, vacuole | 27.42 | 26.49 |
CDY30675 | Canola | endoplasmic reticulum, vacuole | 27.42 | 26.49 |
CDY51410 | Canola | mitochondrion, plastid | 9.95 | 26.43 |
CDY39106 | Canola | vacuole | 25.27 | 26.18 |
CDY54591 | Canola | extracellular | 26.88 | 25.84 |
CDY36628 | Canola | cytosol | 26.34 | 25.59 |
Solyc11g051120.1.1 | Tomato | cytosol | 9.95 | 25.52 |
CDY36625 | Canola | extracellular | 9.14 | 25.0 |
CDY54588 | Canola | extracellular | 25.54 | 24.61 |
CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.27 | 24.48 |
CDY54196 | Canola | extracellular | 25.54 | 24.42 |
CDY51412 | Canola | cytosol | 25.0 | 24.28 |
CDX98428 | Canola | extracellular, plasma membrane, vacuole | 25.27 | 24.23 |
CDX97556 | Canola | extracellular | 25.27 | 24.23 |
CDX97555 | Canola | extracellular | 24.73 | 23.83 |
CDY36623 | Canola | endoplasmic reticulum | 23.92 | 23.24 |
CDY54194 | Canola | cytosol | 17.2 | 22.86 |
CDY54198 | Canola | cytosol | 8.06 | 22.56 |
CDY30676 | Canola | cytosol | 14.52 | 21.26 |
Protein Annotations
Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078GZS1 | UniProt:A0A078GZS1 | EnsemblPlants:CDY30674 | ProteinID:CDY30674 |
ProteinID:CDY30674.1 | ncoils:Coil | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
GO:GO:0016788 | EnsemblPlantsGene:GSBRNA2T00045998001 | InterPro:IPR036514 | PFAM:PF00657 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF301 |
InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | UniParc:UPI0004EB16B0 | SEG:seg |
Description
BnaC06g10380DBnaC06g10380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZS1]
Coordinates
chrLK032257:+:387066..389556
Molecular Weight (calculated)
41210.3 Da
IEP (calculated)
8.990
GRAVY (calculated)
-0.146
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKCRLVSII LFVHTIILSI SSINCTENNS KLVTNQAALF VFGDSLFDPG NNNYINTTNR ANFFPYGQTF FKFPTGRVSD GRLIPDFIAE KAWLPLIPPN
101: LQPSNSNSQF TYGVSFASAG AGALVESFSG QVIDLGTQLK SFKNVKRRLR SALGEAETKR IFSRAVYLFN IGGNDLFYAL FQTSSLVNLN AKQKLVDLII
201: GNTTSVVEEV YKMGGRKFGF LNVGAYDCAP GASILDTANI GSCNKPVTEL IDLHNKKFPD GLRRLQRELS GFKYALHDYR TSLLDRINNP SKYGFKEGNK
301: ACCGSGPLRG MPTCGINQTG LSYELCEDVT NYLFFDSAHL TEKAHRQFAE LIWSGPRNVT GPYNLKALFE LN
101: LQPSNSNSQF TYGVSFASAG AGALVESFSG QVIDLGTQLK SFKNVKRRLR SALGEAETKR IFSRAVYLFN IGGNDLFYAL FQTSSLVNLN AKQKLVDLII
201: GNTTSVVEEV YKMGGRKFGF LNVGAYDCAP GASILDTANI GSCNKPVTEL IDLHNKKFPD GLRRLQRELS GFKYALHDYR TSLLDRINNP SKYGFKEGNK
301: ACCGSGPLRG MPTCGINQTG LSYELCEDVT NYLFFDSAHL TEKAHRQFAE LIWSGPRNVT GPYNLKALFE LN
001: MVRLVLIIFF VYTIILSIGS INCIDNNNLV TNQAALFVFG DSLFDAGNNN YINTVSSFRS NIWPYGQTNF KFPTGRLSDG PEKAWLPSIP PNLQPNNGNN
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT
Arabidopsis Description
GLIP3GDSL esterase/lipase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF5]
SUBAcon: [extracellular,plasma membrane]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.