Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08214 | Canola | cytosol | 88.97 | 43.84 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 94.85 | 35.73 |
| Bra037955.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 96.32 | 33.25 |
| CDY61480 | Canola | extracellular, vacuole | 86.03 | 29.7 |
| CDY54197 | Canola | extracellular, vacuole | 85.29 | 29.37 |
| CDY30680 | Canola | mitochondrion | 86.76 | 29.21 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 14.71 | 28.17 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 83.09 | 27.1 |
| CDY51410 | Canola | mitochondrion, plastid | 23.53 | 22.86 |
| PGSC0003DMT400016123 | Potato | cytosol | 13.24 | 20.69 |
| CDY30676 | Canola | cytosol | 27.94 | 14.96 |
| CDY54198 | Canola | cytosol | 12.5 | 12.78 |
| CDY69407 | Canola | extracellular | 23.53 | 12.75 |
| CDY54194 | Canola | cytosol | 24.26 | 11.79 |
| CDY69208 | Canola | mitochondrion | 25.0 | 10.9 |
| Solyc11g051060.1.1 | Tomato | vacuole | 27.94 | 10.56 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.94 | 9.9 |
| CDY36617 | Canola | plasma membrane | 25.0 | 9.83 |
| CDY54591 | Canola | extracellular | 27.94 | 9.82 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 26.47 | 9.81 |
| KRH69020 | Soybean | extracellular | 25.0 | 9.71 |
| CDY51412 | Canola | cytosol | 27.21 | 9.66 |
| CDY54196 | Canola | extracellular | 27.21 | 9.51 |
| KRH13794 | Soybean | nucleus | 25.74 | 9.49 |
| CDY36623 | Canola | endoplasmic reticulum | 26.47 | 9.4 |
| CDY36628 | Canola | cytosol | 26.47 | 9.4 |
| CDX98432 | Canola | extracellular | 25.74 | 9.38 |
| CDX97557 | Canola | extracellular | 25.74 | 9.38 |
| CDY54588 | Canola | extracellular | 26.47 | 9.33 |
| KRH13793 | Soybean | nucleus | 25.0 | 9.21 |
| KRH06260 | Soybean | cytosol, peroxisome | 18.38 | 9.19 |
| CDY30674 | Canola | extracellular, vacuole | 25.0 | 9.14 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 25.74 | 9.09 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 25.74 | 9.09 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 24.26 | 9.07 |
| Solyc04g028470.1.1 | Tomato | cytosol | 21.32 | 9.06 |
| CDY24064 | Canola | plasma membrane | 25.0 | 9.04 |
| KRG94370 | Soybean | extracellular | 24.26 | 9.04 |
| KRH47690 | Soybean | extracellular, vacuole | 24.26 | 9.02 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 24.26 | 8.89 |
| CDY02490 | Canola | extracellular, vacuole | 24.26 | 8.89 |
| CDX97555 | Canola | extracellular | 25.0 | 8.81 |
| CDX97556 | Canola | extracellular | 25.0 | 8.76 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 25.0 | 8.76 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 23.53 | 8.74 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 22.79 | 8.56 |
| PGSC0003DMT400074599 | Potato | cytosol | 20.59 | 8.46 |
| Solyc06g065010.2.1 | Tomato | nucleus | 22.06 | 8.29 |
| KRG97292 | Soybean | extracellular | 22.06 | 8.2 |
| Solyc06g064960.2.1 | Tomato | extracellular | 22.06 | 8.2 |
| CDX97558 | Canola | extracellular | 22.06 | 8.02 |
| CDX98433 | Canola | extracellular, vacuole | 22.06 | 8.02 |
| Solyc06g064980.2.1 | Tomato | extracellular | 22.06 | 7.83 |
| Solyc06g064990.2.1 | Tomato | extracellular | 22.06 | 7.75 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 20.59 | 7.63 |
| PGSC0003DMT400017106 | Potato | extracellular | 20.59 | 7.57 |
| CDY39106 | Canola | vacuole | 19.85 | 7.52 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 19.85 | 7.28 |
| CDY33240 | Canola | vacuole | 19.12 | 7.24 |
| CDX75755 | Canola | plastid | 19.12 | 6.06 |
| KRH07083 | Soybean | extracellular | 11.03 | 5.45 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 9.56 | 3.63 |
| Solyc11g051120.1.1 | Tomato | cytosol | 2.94 | 2.76 |
| KRG97291 | Soybean | extracellular | 1.47 | 1.9 |
| CDY71922 | Canola | extracellular, plasma membrane | 2.94 | 1.8 |
| CDY25680 | Canola | extracellular, plasma membrane | 1.47 | 1.2 |
| CDY02491 | Canola | plastid | 1.47 | 1.18 |
| CDY54192 | Canola | extracellular | 0.74 | 0.75 |
| Solyc01g109020.1.1 | Tomato | extracellular | 0.0 | 0.0 |
| Solyc11g021040.1.1 | Tomato | extracellular | 0.0 | 0.0 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY36625 | EnsemblPlantsGene:GSBRNA2T00062347001 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF301 | ProteinID:CDY36625 | ProteinID:CDY36625.1 |
| SEG:seg | UniParc:UPI0004EBFAA8 | UniProt:A0A078HE46 | MapMan:35.1 | : | : |
Description
BnaC06g06780DBnaC06g06780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE46]
Coordinates
chrLK032379:+:309950..310513
Molecular Weight (calculated)
15354.5 Da
IEP (calculated)
8.046
GRAVY (calculated)
-0.134
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALHNKKLL QLLVELSRQL NGFQYSFYDF FSSIQNRVIK SKTYTFETGI AACCGTGSVN GSSCSTNNTG HLMWGSDPVV IGPNNLRELL FLPLESMAAT
101: RPRQIKIESI YDIKKMESEM ETQWLYQVDK ASSFLI
101: RPRQIKIESI YDIKKMESEM ETQWLYQVDK ASSFLI
001: MLLIPSFTAN SNEPPPSKLS LSDLSMAILK SHFFLLFPLL LLHFHTVSFA QTLFVFGDGL YDAGNKQFLS QNRVDASFPP YGVTVGQATG RWSDGSIVPD
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
Arabidopsis Description
MVP1Inactive GDSL esterase/lipase-like protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA74]
SUBAcon: [vacuole,endoplasmic reticulum,nucleus]
SUBAcon: [vacuole,endoplasmic reticulum,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.